Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G47810 Arabidopsis lyrata HOM05D005297 ORTHO05D006545 9.7e-93 343.6 189 100.0
AT4G04190 Arabidopsis thaliana HOM05D005297 ORTHO05D006545 4.2e-88 328.2 189 89.4
Carub.0006s3210 Capsella rubella HOM05D005297 ORTHO05D006545 1.4e-86 323.2 189 88.4
Aa31LG6G1540 Aethionema arabicum HOM05D005297 ORTHO05D006545 3.7e-84 315.1 189 85.2
BcaC04g21280 Brassica carinata HOM05D005297 ORTHO05D006545 3.1e-83 312.0 189 84.7
Thhalv10029010m.g Eutrema salsugineum HOM05D005297 ORTHO05D006545 5.4e-83 311.2 190 85.8
Sp6g04610 Schrenkiella parvula HOM05D005297 ORTHO05D006545 7.0e-83 310.8 189 83.6
CARHR253330 Cardamine hirsuta HOM05D005297 ORTHO05D006545 9.1e-83 310.5 194 83.5
BcaB01g01797 Brassica carinata HOM05D005297 ORTHO05D006545 1.2e-82 310.1 189 85.2
C09p33610 Brassica napus HOM05D002056 ORTHO05D002289 8.6e-81 303.9 184 84.8
A09p26430 Brassica napus HOM05D005297 ORTHO05D006545 4.2e-80 301.6 184 84.2
Sp7g17550 Schrenkiella parvula HOM05D005297 ORTHO05D006545 7.2e-80 300.8 189 83.1
BolC9t56195H Brassica oleracea HOM05D002056 ORTHO05D002289 6.8e-78 294.3 179 84.4
BraA09t38217Z Brassica rapa HOM05D005297 ORTHO05D006545 3.4e-77 292.0 179 83.8
THA.LOC104799541 Tarenaya hassleriana HOM05D005297 ORTHO05D006545 7.5e-77 290.8 189 77.2
CANSAT64G2769 Cannabis sativa HOM05D005297 ORTHO05D006545 2.2e-76 289.3 189 77.8
Gorai.001G120900 Gossypium raimondii HOM05D005297 ORTHO05D006545 1.7e-73 279.6 189 78.3
Aqoxy4G02831 Aquilegia oxysepala HOM05D005297 ORTHO05D006545 2.9e-73 278.9 189 73.5
Gohir.D07G112500 Gossypium hirsutum HOM05D005297 ORTHO05D006545 3.8e-73 278.5 189 77.8
Duzib150G0109 Durio zibethinus HOM05D005297 ORTHO05D006545 6.6e-73 277.7 189 75.7
Nn2g14072 Nelumbo nucifera HOM05D005297 ORTHO05D006545 8.6e-73 277.3 189 74.1
Manes.11G159700 Manihot esculenta HOM05D005297 ORTHO05D006545 1.5e-72 276.6 190 74.2
Gohir.A07G108700 Gossypium hirsutum HOM05D005297 ORTHO05D006545 1.9e-72 276.2 189 77.2
Gohir.A07G108780 Gossypium hirsutum HOM05D005297 ORTHO05D006545 1.9e-72 276.2 189 77.2
QL02p014091 Quercus lobata HOM05D005297 ORTHO05D006545 1.9e-72 276.2 188 75.0
CSS0010276 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 2.5e-72 275.8 189 73.5
HanXRQChr13g0408991 Helianthus annuus HOM05D005297 ORTHO05D006545 2.5e-72 275.8 189 72.5
Sabra09G0113000 Salix brachista HOM05D005297 ORTHO05D006545 2.5e-72 275.8 189 76.2
Sabra09G0115400 Salix brachista HOM05D005297 ORTHO05D006545 2.5e-72 275.8 189 76.2
Thecc.09G287800 Theobroma cacao HOM05D005297 ORTHO05D006545 3.3e-72 275.4 189 76.2
Nitab4.5_0003532g0010 Nicotiana tabacum HOM05D005297 ORTHO05D006545 4.3e-72 275.0 189 74.6
Manes.14G159600 Manihot esculenta HOM05D005297 ORTHO05D006545 5.6e-72 274.6 189 73.5
Eucgr.J00466 Eucalyptus grandis HOM05D005297 ORTHO05D006545 1.2e-71 273.5 190 72.6
Solyc11g067150.2 Solanum lycopersicum HOM05D005297 ORTHO05D006545 2.8e-71 272.3 188 73.9
Sopen11g026830 Solanum pennellii HOM05D005297 ORTHO05D006545 2.8e-71 272.3 188 73.9
MELO3C003122.2 Cucumis melo HOM05D005297 ORTHO05D006545 3.6e-71 271.9 187 73.8
CAN.G644.6 Capsicum annuum HOM05D005297 ORTHO05D006545 4.7e-71 271.6 189 74.1
ECA236G0310 Erigeron canadensis HOM05D005297 ORTHO05D006545 4.7e-71 271.6 189 72.0
Lsat_1_v5_gn_8_117180 Lactuca sativa HOM05D005297 ORTHO05D006545 4.7e-71 271.6 190 73.2
PGSC0003DMG400007409 Solanum tuberosum HOM05D005297 ORTHO05D006545 4.7e-71 271.6 189 73.5
CsaV3_4G024870 Cucumis sativus L. HOM05D005297 ORTHO05D006545 6.1e-71 271.2 187 74.3
Rhsim13G0108000 Rhododendron simsii HOM05D005297 ORTHO05D006545 6.1e-71 271.2 189 72.5
SalBow6G5239 Salvia bowleyana HOM05D005297 ORTHO05D006545 6.1e-71 271.2 187 73.8
Migut.N00940 Erythranthe guttata HOM05D005297 ORTHO05D006545 8.0e-71 270.8 189 72.0
Potri.009G146100 Populus trichocarpa HOM05D005297 ORTHO05D006545 8.0e-71 270.8 190 74.2
CAN.G1177.8 Capsicum annuum HOM05D005297 ORTHO05D006545 1.8e-70 269.6 181 75.1
Prupe.6G124400 Prunus persica HOM05D005297 ORTHO05D006545 1.8e-70 269.6 161 83.2
Atru.chr3.3335 Acer truncatum HOM05D005297 ORTHO05D006545 2.3e-70 269.2 190 72.6
PSO384G0067 Papaver somniferum HOM05D005297 ORTHO05D006545 2.3e-70 269.2 161 80.7
PSO425G0036 Papaver somniferum HOM05D005297 ORTHO05D006545 3.1e-70 268.9 161 81.4
Thhalv10005498m.g Eutrema salsugineum HOM05D005297 ORTHO05D006545 5.2e-70 268.1 159 86.2
PGR119G1280 Punica granatum HOM05D005297 ORTHO05D006545 5.2e-70 268.1 189 73.0
SGA_v2.0_scaffold147G36360 Striga asiatica HOM05D005297 ORTHO05D006545 5.2e-70 268.1 187 72.2
MD11G1160800 Malus domestica HOM05D005297 ORTHO05D006545 1.2e-69 266.9 161 81.4
Hund18738 Selenicereus undatus HOM05D005297 ORTHO05D006545 1.2e-69 266.9 187 71.7
Medtr0227s0030 Medicago truncatula HOM05D005297 ORTHO05D006545 1.5e-69 266.5 160 81.2
Peaxi162Scf00544g00918 Petunia axillaris HOM05D005297 ORTHO05D006545 1.5e-69 266.5 181 75.1
RcHm_v2.0_Chr5g0054661 Rosa chinensis HOM05D005297 ORTHO05D006545 2.0e-69 266.2 161 81.4
RcHm_v2.0_Chr5g0054901 Rosa chinensis HOM05D005297 ORTHO05D006545 2.0e-69 266.2 161 82.0
MSTRG.18743 Avicennia marina HOM05D005297 ORTHO05D006545 2.6e-69 265.8 189 70.9
PSO170G0247 Papaver somniferum HOM05D005297 ORTHO05D006545 2.6e-69 265.8 162 80.2
Haze_23424 Corylus avellana HOM05D005297 ORTHO05D006545 3.4e-69 265.4 161 80.7
Nitab4.5_0021448g0010 Nicotiana tabacum HOM05D005297 ORTHO05D006545 3.4e-69 265.4 181 74.6
Cc01_g09520 Coffea canephora HOM05D005297 ORTHO05D006545 4.4e-69 265.0 181 74.6
FAN16G3468 Fragaria x ananassa HOM05D005297 ORTHO05D006545 4.4e-69 265.0 161 82.0
Lalb_Chr24g0395231 Lupinus albus HOM05D005297 ORTHO05D006545 4.4e-69 265.0 158 81.0
TAR623G0730 Trochodendron aralioides HOM05D005297 ORTHO05D006545 5.8e-69 264.6 189 74.6
Dinv29444 Davidia involucrata HOM05D005297 ORTHO05D006545 7.5e-69 264.2 158 82.9
FAN21G1663 Fragaria x ananassa HOM05D005297 ORTHO05D006545 7.5e-69 264.2 158 82.9
vmacro03296 Vaccinium macrocarpon HOM05D005297 ORTHO05D006545 9.8e-69 263.8 189 74.6
GSVIVG01036187001 Vitis vinifera HOM05D005297 ORTHO05D006545 1.3e-68 263.5 181 73.5
HPP92_006421 Vanilla planifolia HOM05D005297 ORTHO05D006545 1.7e-68 263.1 189 71.4
AUR62009792 Chenopodium quinoa HOM05D005297 ORTHO05D006545 2.2e-68 262.7 188 70.7
unitig_736.g22397 Utricularia gibba HOM05D005297 ORTHO05D006545 2.2e-68 262.7 189 70.9
arahy.Tifrunner.gnm1.ann1.CT6H1M Arachis hypogaea HOM05D005297 ORTHO05D006545 3.7e-68 261.9 158 81.0
Sc21g0007210 Simmondsia chinensis HOM05D005297 ORTHO05D006545 4.9e-68 261.5 158 81.0
MBI17_g16878_MAGBIO Magnolia biondii HOM05D005297 ORTHO05D006545 8.3e-68 260.8 188 71.3
Medtr4g088775 Medicago truncatula HOM05D005297 ORTHO05D006545 8.3e-68 260.8 160 80.0
PSO801G0702 Papaver somniferum HOM05D005297 ORTHO05D006545 1.4e-67 260.0 162 79.6
Phvul.005G125900 Phaseolus vulgaris HOM05D005297 ORTHO05D006545 1.9e-67 259.6 161 77.6
Lj2g0006626 Lotus japonicus HOM05D005297 ORTHO05D006545 4.1e-67 258.5 159 79.2
Lsat_1_v5_gn_8_90380 Lactuca sativa HOM05D005297 ORTHO05D006545 5.4e-67 258.1 181 71.8
CiPaw.13G138500 Carya illinoinensis HOM05D005297 ORTHO05D006545 9.2e-67 257.3 212 65.1
FvH4_3g29610 Fragaria vesca HOM05D005297 ORTHO05D006545 9.2e-67 257.3 158 81.0
FAN11G1678 Fragaria x ananassa HOM05D005297 ORTHO05D006545 9.2e-67 257.3 158 81.0
Glyma.12G183000 Glycine max HOM05D005297 ORTHO05D006545 1.6e-66 256.5 160 78.1
PSO339G0592 Papaver somniferum HOM05D005297 ORTHO05D006545 2.0e-66 256.1 162 77.8
Sc15g0007560 Simmondsia chinensis HOM05D005297 ORTHO05D006545 2.0e-66 256.1 156 80.1
Ciclev10029400m.g Citrus clementina HOM05D005297 ORTHO05D006545 4.6e-66 255.0 189 69.8
Psat2g130440 Pisum sativum HOM05D005297 ORTHO05D006545 6.0e-66 254.6 158 79.1
TWI79G0927 Tripterygium wilfordii HOM05D005297 ORTHO05D006545 6.0e-66 254.6 189 66.7
EL10Ac7g15793 Beta vulgaris HOM05D005297 ORTHO05D006545 1.3e-65 253.4 188 68.6
TWI79G0105 Tripterygium wilfordii HOM05D005297 ORTHO05D006545 1.3e-65 253.4 189 66.7
Zm00001eb084080 Zea mays HOM05D005297 ORTHO05D006545 1.3e-65 253.4 189 68.3
arahy.Tifrunner.gnm1.ann1.Q11QUE Arachis hypogaea HOM05D005297 ORTHO05D006545 3.0e-65 252.3 170 76.5
Glyma.13G318100 Glycine max HOM05D005297 ORTHO05D006545 3.0e-65 252.3 158 77.2
PSO339G2689 Papaver somniferum HOM05D005297 ORTHO05D006545 1.9e-64 249.6 158 77.2
Os04g0410300 Oryza sativa ssp. japonica HOM05D005297 ORTHO05D006545 2.5e-64 249.2 189 67.2
Sed0022012 Sechium edule HOM05D005297 ORTHO05D006545 3.3e-64 248.8 145 84.1
Cpa.g.sc32.130 Carica papaya HOM05D005297 ORTHO05D006545 4.3e-64 248.4 181 70.7
Hma1.2p1_0305F.1_g119460 Hydrangea macrophylla HOM05D005297 ORTHO05D006545 7.3e-64 247.7 153 79.1
CSS0048581 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 2.1e-63 246.1 145 82.8
VMungo1080G0855 Vigna mungo HOM05D005392 ORTHO05D006709 2.8e-63 245.7 145 82.1
Rhsim05G0032500 Rhododendron simsii HOM05D005297 ORTHO05D006545 6.2e-63 244.6 144 82.6
PSO782G5408 Papaver somniferum HOM05D005297 ORTHO05D006545 8.0e-63 244.2 162 75.9
Ca_09074_v3 Cicer arietinum L. HOM05D005297 ORTHO05D006545 1.8e-62 243.0 146 81.5
Rhsim13G0108200 Rhododendron simsii HOM05D005297 ORTHO05D006545 4.0e-62 241.9 142 82.4
COL.COLO4_19936 Corchorus olitorius HOM05D005297 ORTHO05D006545 2.0e-61 239.6 137 86.1
ATR0820G241 Amborella trichopoda HOM05D005297 ORTHO05D006545 4.4e-61 238.4 179 67.6
TAR369G0691 Trochodendron aralioides HOM05D005297 ORTHO05D006545 1.7e-60 236.5 148 79.7
arahy.Tifrunner.gnm1.ann1.K2P72U Arachis hypogaea HOM05D005780 ORTHO05D006545 3.7e-60 235.3 140 81.4
SEGI_17822 Sequoiadendron giganteum HOM05D005297 ORTHO05D006545 2.4e-59 232.6 186 62.9
Nitab4.5_0024933g0010 Nicotiana tabacum HOM05D005297 ORTHO05D006545 1.0e-57 227.3 137 81.8
Os01g0191000 Oryza sativa ssp. japonica HOM05D005297 ORTHO05D006545 8.6e-57 224.2 155 71.0
AUR62039239 Chenopodium quinoa HOM05D005297 ORTHO05D006545 1.5e-56 223.4 185 64.3
Rhsim13G0107700 Rhododendron simsii HOM05D005297 ORTHO05D006545 1.4e-54 216.9 189 64.0
Medtr4g073910 Medicago truncatula HOM05D005297 ORTHO05D006545 1.1e-51 207.2 135 78.5
CSS0004713 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 2.3e-49 199.5 155 67.1
Pp3c27_2700 Physcomitrium patens HOM05D005297 ORTHO05D006545 1.5e-48 196.8 153 60.8
Mapoly0068s0054 Marchantia polymorpha HOM05D005297 ORTHO05D006545 2.8e-47 192.6 161 54.7
Actinidia24196 Actinidia chinensis HOM05D005392 ORTHO05D006709 3.6e-47 192.2 174 59.2
CDE11G0319 Ceratophyllum demersum HOM05D005297 ORTHO05D006545 3.1e-46 189.1 117 77.8
Lj2A987T34 Lonicera japonica HOM05D005297 ORTHO05D006545 3.1e-46 189.1 110 85.5
arahy.Tifrunner.gnm1.ann1.S3X3J8 Arachis hypogaea HOM05D005297 ORTHO05D006545 4.4e-45 185.3 110 81.8
Duzib168G0206 Durio zibethinus HOM05D005297 ORTHO05D006545 1.3e-44 183.7 117 82.1
MD03G1139300 Malus domestica HOM05D005297 ORTHO05D006545 3.5e-42 175.6 143 65.0
PSO782G3247 Papaver somniferum HOM05D005297 ORTHO05D006545 1.5e-40 170.2 113 76.1
CBR_g82609 Chara braunii HOM05D005297 ORTHO05D006545 3.1e-38 162.5 147 53.7
TPR.G2691 Trifolium pratense HOM05D005297 ORTHO05D006545 9.0e-38 161.0 112 72.3
SHI11151 Sapria himalayana HOM05D005297 ORTHO05D000023 4.9e-36 155.2 131 62.6
Gorai.006G055300 Gossypium raimondii HOM05D005297 ORTHO05D006545 6.4e-36 154.8 83 91.6
Gorai.003G076100 Gossypium raimondii HOM05D005297 ORTHO05D006545 1.6e-34 150.2 128 61.7
Ca_05140_v3 Cicer arietinum L. HOM05D005297 ORTHO05D012218 1.0e-33 147.5 100 71.0
Gorai.003G055900 Gossypium raimondii HOM05D005297 ORTHO05D006545 1.0e-33 147.5 102 72.5
DCAR_001100 Daucus carota HOM05D005297 ORTHO05D006545 2.5e-32 142.9 139 55.4
Gorai.005G178100 Gossypium raimondii HOM05D005297 ORTHO05D006545 2.8e-31 139.4 83 81.9
Gohir.D09G053026 Gossypium hirsutum HOM05D005297 ORTHO05D006545 1.1e-30 137.5 83 84.3
Gohir.D06G133032 Gossypium hirsutum HOM05D005297 ORTHO05D006545 1.5e-29 133.7 68 94.1
arahy.Tifrunner.gnm1.ann1.LDL4WN Arachis hypogaea HOM05D005297 ORTHO05D006545 4.5e-29 132.1 89 74.2
Oeu050204.1 Olea europaea HOM05D005297 ORTHO05D006545 3.2e-27 125.9 197 41.6
C02p40370 Brassica napus HOM05D000848 ORTHO05D000007 4.3e-24 115.5 66 84.8
CSS0043339 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 9.6e-24 114.4 154 44.2
QL02p014117 Quercus lobata HOM05D005297 ORTHO05D006545 1.2e-21 107.5 65 80.0
RcHm_v2.0_Chr5g0054771 Rosa chinensis HOM05D005297 ORTHO05D006545 1.5e-21 107.1 120 55.0
BolC2t10071H Brassica oleracea HOM05D005297 ORTHO05D000007 2.6e-21 106.3 58 89.7
Gohir.D02G158550 Gossypium hirsutum HOM05D005297 ORTHO05D006545 3.4e-21 105.9 85 68.2
Oeu046141.1 Olea europaea HOM05D005297 ORTHO05D006545 1.4e-19 100.5 94 56.4
TPR.G32973 Trifolium pratense HOM05D005297 ORTHO05D006545 2.7e-18 96.3 52 86.5
Psat2g121320 Pisum sativum HOM05D005297 ORTHO05D006545 6.9e-14 81.6 58 63.8
PSO541G0924 Papaver somniferum HOM05D005117 ORTHO05D005956 2.2e-07 60.1 36 77.8
Gohir.D03G086101 Gossypium hirsutum HOM05D003628 ORTHO05D004253 9.0e-06 54.7 67 47.8


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