Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G46700 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 3.1e-66 255.0 127 100.0
AL2G22600 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 4.9e-64 247.7 126 97.6
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 1.7e-40 169.5 104 81.7
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 3.2e-39 165.2 100 82.0
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 9.3e-39 163.7 100 82.0
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 6.2e-35 151.0 100 73.0
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 6.2e-35 151.0 100 73.0
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 8.1e-35 150.6 100 72.0
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 1.8e-34 149.4 100 71.0
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 9.0e-34 147.1 100 76.0
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 9.0e-34 147.1 101 73.3
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 2.0e-33 146.0 100 71.0
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 1.6e-30 136.3 100 68.0
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 3.1e-18 95.5 62 77.4
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 1.7e-16 89.7 100 47.0
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 1.9e-12 76.3 101 39.6
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 2.5e-12 75.9 95 42.1
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 3.3e-12 75.5 95 42.1
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 4.8e-11 71.6 108 39.8
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 1.1e-10 70.5 101 37.6
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 1.1e-10 70.5 103 40.8
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 1.1e-10 70.5 103 40.8
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 1.4e-10 70.1 118 35.6
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 2.4e-10 69.3 101 40.6
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 2.4e-10 69.3 99 38.4
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 6.9e-10 67.8 97 37.1
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.2e-09 67.0 99 37.4
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 1.2e-09 67.0 93 35.5
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.2e-09 67.0 101 36.6
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 2.6e-09 65.9 100 38.0
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 2.6e-09 65.9 108 34.3
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 3.4e-09 65.5 103 38.8
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 5.9e-09 64.7 95 37.9
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 7.7e-09 64.3 99 36.4
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 1.0e-08 63.9 99 37.4
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 1.0e-08 63.9 101 34.7
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 1.3e-08 63.5 95 38.9
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 1.3e-08 63.5 119 33.6
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 2.2e-08 62.8 93 34.4
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 2.2e-08 62.8 95 37.9
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 2.9e-08 62.4 96 35.4
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 5.0e-08 61.6 106 34.0
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 2.5e-07 59.3 97 37.1
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 3.2e-07 58.9 96 34.4
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 3.2e-07 58.9 93 33.3
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 5.5e-07 58.2 101 33.7
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 9.4e-07 57.4 119 30.3
Aa31LG2G19330 Aethionema arabicum HOM05D003067 ORTHO05D009378 6.1e-06 54.7 63 44.4


User provided reference genes

Program Settings