Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G45810 Arabidopsis lyrata HOM05D025523 ORTHO05D023653 1.4e-40 169.1 79 100.0
AT4G11393 Arabidopsis thaliana HOM05D025523 ORTHO05D023653 1.4e-37 159.1 79 93.7
AL4G15710 Arabidopsis lyrata HOM05D025523 ORTHO05D023653 2.2e-30 135.2 79 70.9
CARHR179090 Cardamine hirsuta HOM05D025523 ORTHO05D023653 1.4e-29 132.5 80 80.0
CARHR131460 Cardamine hirsuta HOM05D025523 ORTHO05D023653 1.2e-28 129.4 80 77.5
AL4G15700 Arabidopsis lyrata HOM05D007338 ORTHO05D013190 5.8e-15 84.0 78 51.3
BolC1t05675H Brassica oleracea HOM05D011267 ORTHO05D013190 9.9e-15 83.2 76 51.3
BraA01t04490Z Brassica rapa HOM05D011267 ORTHO05D013190 1.9e-13 79.0 76 50.0
AL3G16430 Arabidopsis lyrata HOM05D011267 ORTHO05D013190 2.1e-12 75.5 76 46.1
AT3G05727 Arabidopsis thaliana HOM05D011267 ORTHO05D013190 3.5e-12 74.7 76 46.1
CARHR080190 Cardamine hirsuta HOM05D011267 ORTHO05D013190 1.8e-11 72.4 76 47.4
Carub.0003s0509 Capsella rubella HOM05D011267 ORTHO05D013190 1.2e-07 59.7 78 43.6
AT3G05730 Arabidopsis thaliana HOM05D011267 ORTHO05D013190 9.9e-07 56.6 84 38.1
AT1G34047 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 1.3e-06 56.2 79 43.0
BcaC06g31804 Brassica carinata HOM05D007338 ORTHO05D009406 1.3e-06 56.2 78 42.3
BcaC06g31805 Brassica carinata HOM05D007338 ORTHO05D009406 2.9e-06 55.1 78 42.3
BraA05t22946Z Brassica rapa HOM05D011267 ORTHO05D013190 8.4e-06 53.5 87 34.5


User provided reference genes

Program Settings