Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G45280 Arabidopsis lyrata HOM05D007782 ORTHO05D009833 1.9e-33 145.2 72 100.0
CARHR255470 Cardamine hirsuta HOM05D007782 ORTHO05D009833 1.1e-25 119.4 71 84.5
Thhalv10029109m.g Eutrema salsugineum HOM05D007782 ORTHO05D009833 2.5e-25 118.2 71 81.7
AT4G23760 Arabidopsis thaliana HOM05D007782 ORTHO05D009833 2.4e-23 111.7 69 76.8
Sp6g06300 Schrenkiella parvula HOM05D007782 ORTHO05D009833 2.4e-23 111.7 64 84.4
Thhalv10026535m.g Eutrema salsugineum HOM05D007782 ORTHO05D009833 2.6e-22 108.2 69 72.5
Sp7g21730 Schrenkiella parvula HOM05D007782 ORTHO05D009833 2.6e-22 108.2 69 71.0
AL7G29590 Arabidopsis lyrata HOM05D007782 ORTHO05D009833 5.8e-22 107.1 69 71.0
Carub.0007s1735 Capsella rubella HOM05D007782 ORTHO05D009833 7.6e-22 106.7 69 71.0
Aa31LG6G7000 Aethionema arabicum HOM05D007782 ORTHO05D009833 1.3e-21 105.9 71 71.8
THA.LOC104814903 Tarenaya hassleriana HOM05D007782 ORTHO05D009833 3.8e-21 104.4 70 74.3
CARHR231160 Cardamine hirsuta HOM05D007782 ORTHO05D009833 1.6e-19 99.0 69 66.7
BolC7t45807H Brassica oleracea HOM05D007782 ORTHO05D009833 2.1e-19 98.6 70 67.1
C07p53110 Brassica napus HOM05D007782 ORTHO05D009833 3.5e-19 97.8 69 63.8
BcaNung05927 Brassica carinata HOM05D007782 ORTHO05D009833 1.0e-18 96.3 69 63.8
A03p54750 Brassica napus HOM05D007782 ORTHO05D009833 1.0e-18 96.3 64 70.3
BraA03t14542Z Brassica rapa HOM05D007782 ORTHO05D009833 1.0e-18 96.3 64 70.3
BcaNung03194 Brassica carinata HOM05D007782 ORTHO05D009833 8.2e-16 86.7 87 50.6
CsaV3_5G002190 Cucumis sativus L. HOM05D007782 ORTHO05D009833 1.8e-15 85.5 59 66.1
MELO3C005735.2 Cucumis melo HOM05D007782 ORTHO05D009833 4.1e-15 84.3 59 64.4
Manes.01G046100 Manihot esculenta HOM05D007782 ORTHO05D009833 9.0e-15 83.2 59 61.0
GSVIVG01019488001 Vitis vinifera HOM05D007782 ORTHO05D009833 3.4e-14 81.3 64 60.9
ClCG01G002060 Citrullus lanatus HOM05D007782 ORTHO05D009833 5.9e-14 80.5 59 62.7
TAR636G2384 Trochodendron aralioides HOM05D007782 ORTHO05D009833 5.9e-14 80.5 59 59.3
Hund14240 Selenicereus undatus HOM05D007782 ORTHO05D009833 7.7e-14 80.1 61 63.9
Potri.003G136500 Populus trichocarpa HOM05D007782 ORTHO05D009833 1.0e-13 79.7 59 57.6
Thecc.03G292200 Theobroma cacao HOM05D007782 ORTHO05D009833 1.0e-13 79.7 68 57.4
Sabra03G0098200 Salix brachista HOM05D007782 ORTHO05D009833 1.3e-13 79.3 63 52.4
Dinv37557 Davidia involucrata HOM05D007782 ORTHO05D009833 3.8e-13 77.8 63 58.7
Cc08_g15700 Coffea canephora HOM05D007782 ORTHO05D009833 5.0e-13 77.4 61 57.4
Actinidia27340 Actinidia chinensis HOM05D007782 ORTHO05D009833 6.5e-13 77.0 65 56.9
Prupe.5G114300 Prunus persica HOM05D007782 ORTHO05D009833 6.5e-13 77.0 68 57.4
Sed0001446 Sechium edule HOM05D007782 ORTHO05D009833 8.5e-13 76.6 50 70.0
Cfa012852 Carpinus fangiana HOM05D007782 ORTHO05D009833 1.1e-12 76.3 61 60.7
COL.COLO4_21276 Corchorus olitorius HOM05D007782 ORTHO05D009833 1.1e-12 76.3 58 55.2
Haze_08681 Corylus avellana HOM05D007782 ORTHO05D009833 1.1e-12 76.3 61 60.7
QL02p031553 Quercus lobata HOM05D007782 ORTHO05D009833 2.5e-12 75.1 57 54.4
CDE10G0352 Ceratophyllum demersum HOM05D007782 ORTHO05D009833 3.2e-12 74.7 64 51.6
DCAR_027723 Daucus carota HOM05D007782 ORTHO05D009833 3.2e-12 74.7 71 53.5
Nn1g01795 Nelumbo nucifera HOM05D007782 ORTHO05D009833 3.2e-12 74.7 62 59.7
CDE10G0746 Ceratophyllum demersum HOM05D007782 ORTHO05D009833 4.2e-12 74.3 59 55.9
CiPaw.12G085400 Carya illinoinensis HOM05D007782 ORTHO05D009833 5.5e-12 73.9 58 55.2
MD06G1100800 Malus domestica HOM05D007782 ORTHO05D009833 5.5e-12 73.9 56 58.9
RcHm_v2.0_Chr7g0195561 Rosa chinensis HOM05D007782 ORTHO05D009833 5.5e-12 73.9 68 51.5
Lsat_1_v5_gn_6_11880 Lactuca sativa HOM05D007782 ORTHO05D009833 7.2e-12 73.6 55 63.6
Lj4g0009467 Lotus japonicus HOM05D007782 ORTHO05D009833 7.2e-12 73.6 63 49.2
Lalb_Chr09g0332651 Lupinus albus HOM05D007782 ORTHO05D009833 7.2e-12 73.6 59 57.6
Aqoxy7G00161 Aquilegia oxysepala HOM05D007782 ORTHO05D009833 1.2e-11 72.8 58 58.6
Ca_17498_v3 Cicer arietinum L. HOM05D007782 ORTHO05D009833 1.2e-11 72.8 64 46.9
Lalb_Chr05g0224281 Lupinus albus HOM05D007782 ORTHO05D009833 1.2e-11 72.8 55 54.5
Migut.E01229 Erythranthe guttata HOM05D007782 ORTHO05D009833 2.1e-11 72.0 68 48.5
FAN04G1669 Fragaria x ananassa HOM05D007782 ORTHO05D009833 2.1e-11 72.0 68 51.5
Psat7g027800 Pisum sativum HOM05D007782 ORTHO05D009833 2.1e-11 72.0 60 55.0
Ciclev10023213m.g Citrus clementina HOM05D007782 ORTHO05D009833 2.7e-11 71.6 69 49.3
FAN08G0568 Fragaria x ananassa HOM05D007782 ORTHO05D009833 2.7e-11 71.6 55 56.4
Eucgr.E00835 Eucalyptus grandis HOM05D007782 ORTHO05D009833 3.6e-11 71.2 58 56.9
SalBow8G2543 Salvia bowleyana HOM05D007782 ORTHO05D009833 4.6e-11 70.9 53 56.6
unitig_61.g26273 Utricularia gibba HOM05D007782 ORTHO05D009833 4.6e-11 70.9 49 59.2
HanXRQChr07g0191091 Helianthus annuus HOM05D007782 ORTHO05D009833 6.1e-11 70.5 52 63.5
Solyc12g056090.2 Solanum lycopersicum HOM05D007782 ORTHO05D009833 6.1e-11 70.5 46 63.0
Sopen12g028600 Solanum pennellii HOM05D007782 ORTHO05D009833 6.1e-11 70.5 46 63.0
PGSC0003DMG400004987 Solanum tuberosum HOM05D007782 ORTHO05D009833 6.1e-11 70.5 46 63.0
arahy.Tifrunner.gnm1.ann1.UB6WN3 Arachis hypogaea HOM05D007782 ORTHO05D009833 7.9e-11 70.1 53 56.6
arahy.Tifrunner.gnm1.ann1.WVD97E Arachis hypogaea HOM05D007782 ORTHO05D009833 7.9e-11 70.1 53 56.6
TPR.G3446 Trifolium pratense HOM05D007782 ORTHO05D009833 7.9e-11 70.1 60 53.3
Atru.chr9.2057 Acer truncatum HOM05D007782 ORTHO05D009833 1.0e-10 69.7 64 50.0
ATR1093G039 Amborella trichopoda HOM05D007782 ORTHO05D009833 2.3e-10 68.6 54 53.7
PSO135G0862 Papaver somniferum HOM05D007782 ORTHO05D009833 2.3e-10 68.6 51 60.8
Peaxi162Scf00117g01316 Petunia axillaris HOM05D007782 ORTHO05D009833 2.3e-10 68.6 56 55.4
vmacro11447 Vaccinium macrocarpon HOM05D007782 ORTHO05D009833 3.0e-10 68.2 53 54.7
MBI06_g22402_MAGBIO Magnolia biondii HOM05D007782 ORTHO05D009833 6.7e-10 67.0 51 58.8
Glyma.08G021000 Glycine max HOM05D007782 ORTHO05D009833 2.0e-09 65.5 59 45.8
Phvul.002G295900 Phaseolus vulgaris HOM05D007782 ORTHO05D009833 2.5e-09 65.1 64 43.8
TWI81G1055 Tripterygium wilfordii HOM05D007782 ORTHO05D009833 9.7e-09 63.2 59 52.5
CAN.G2065.2 Capsicum annuum HOM05D007782 ORTHO05D009833 2.2e-08 62.0 44 56.8
Nitab4.5_0002788g0030 Nicotiana tabacum HOM05D007782 ORTHO05D009833 2.2e-08 62.0 43 58.1
Os01g0224300 Oryza sativa ssp. japonica HOM05D007782 ORTHO05D009833 2.2e-08 62.0 47 51.1
Rhsim02G0240700 Rhododendron simsii HOM05D007782 ORTHO05D009833 2.2e-08 62.0 40 65.0
Medtr8g099240 Medicago truncatula HOM05D007782 ORTHO05D009833 2.8e-08 61.6 55 52.7
FAN18G3918 Fragaria x ananassa HOM05D007782 ORTHO05D009833 3.7e-08 61.2 45 57.8
Glyma.05G214700 Glycine max HOM05D007782 ORTHO05D009833 4.8e-08 60.8 56 46.4
CAN.G98.14 Capsicum annuum HOM05D007782 ORTHO05D009833 1.8e-07 58.9 44 52.3
AagrBONN_evm.TU.Sc2ySwM_362.1714 Anthoceros agrestis HOM05D007782 ORTHO05D009833 2.4e-07 58.5 59 47.5
Duzib084G1198 Durio zibethinus HOM05D007782 ORTHO05D009833 2.4e-07 58.5 47 57.4
Potri.001G094750 Populus trichocarpa HOM05D007782 ORTHO05D009833 4.1e-07 57.8 57 56.1
Mapoly0007s0070 Marchantia polymorpha HOM05D007782 ORTHO05D009833 9.1e-07 56.6 58 46.6


User provided reference genes

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