Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 2.7e-197 691.8 349 100.0
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 8.1e-186 653.7 347 95.1
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 1.1e-185 653.3 352 94.0
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 1.8e-180 636.0 350 92.3
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 4.3e-179 631.3 349 91.1
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 5.6e-179 630.9 349 91.4
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 5.6e-179 630.9 349 91.4
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 7.4e-179 630.6 349 91.4
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 4.8e-178 627.9 350 91.7
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 2.4e-177 625.5 349 90.8
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 3.1e-177 625.2 349 90.5
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 2.9e-175 618.6 346 90.8
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 4.8e-170 601.3 349 84.2
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 4.4e-155 551.6 350 78.3
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 4.8e-154 548.1 349 78.2
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.0e-152 542.7 346 76.0
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 3.4e-152 542.0 346 75.1
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 3.4e-152 542.0 342 78.7
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 5.9e-152 541.2 343 76.4
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 5.9e-152 541.2 343 76.7
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 7.7e-152 540.8 352 75.9
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 2.9e-151 538.9 346 78.3
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 2.9e-151 538.9 354 76.0
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 6.5e-151 537.7 351 75.5
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 6.5e-151 537.7 356 75.3
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 6.5e-151 537.7 343 75.8
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 6.5e-151 537.7 349 77.1
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 1.9e-150 536.2 346 77.2
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 2.5e-150 535.8 349 76.2
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 4.2e-150 535.0 352 74.7
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 4.2e-150 535.0 346 75.7
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 7.2e-150 534.3 346 75.4
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 7.2e-150 534.3 351 74.9
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 7.2e-150 534.3 343 79.0
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 9.4e-150 533.9 344 75.3
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 9.4e-150 533.9 347 75.2
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 2.1e-149 532.7 350 75.4
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 3.6e-149 531.9 344 77.6
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 4.7e-149 531.6 348 75.6
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 7.9e-149 530.8 349 74.8
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.0e-148 530.4 379 72.3
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 1.4e-148 530.0 347 75.2
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 1.8e-148 529.6 327 77.7
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.3e-148 529.3 350 76.3
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 2.3e-148 529.3 350 75.1
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 2.3e-148 529.3 346 77.2
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 3.0e-148 528.9 335 79.1
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 3.9e-148 528.5 329 77.2
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 6.7e-148 527.7 343 76.4
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.1e-147 526.9 347 75.5
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 2.0e-147 526.2 346 76.6
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 2.6e-147 525.8 343 75.5
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 7.4e-147 524.2 335 75.8
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 1.3e-146 523.5 341 75.4
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 2.8e-146 522.3 352 75.0
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 6.3e-146 521.2 343 73.8
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 6.3e-146 521.2 351 74.4
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 1.1e-145 520.4 354 75.4
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 1.1e-145 520.4 335 75.8
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 1.1e-145 520.4 343 73.8
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.1e-145 520.4 323 78.3
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 1.4e-145 520.0 352 72.7
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 2.4e-145 519.2 343 73.5
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 3.1e-145 518.8 351 72.9
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 1.2e-144 516.9 315 77.8
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 5.9e-144 514.6 361 71.7
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 2.9e-143 512.3 341 75.7
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 3.8e-143 511.9 395 65.6
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 1.5e-142 510.0 337 73.3
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 1.5e-142 510.0 343 73.2
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 1.2e-141 506.9 311 78.8
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 1.6e-141 506.5 340 72.6
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 4.0e-140 501.9 342 71.3
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 2.6e-139 499.2 346 69.9
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 2.2e-138 496.1 346 69.4
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 2.0e-136 489.6 342 72.2
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 5.9e-136 488.0 337 70.3
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 2.9e-135 485.7 350 72.0
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 8.5e-135 484.2 352 67.0
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 3.0e-132 475.7 346 67.9
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 8.3e-130 467.6 333 69.1
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 9.1e-129 464.2 343 67.9
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 2.7e-128 462.6 328 67.1
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 3.6e-125 452.2 340 63.8
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 2.3e-124 449.5 263 82.9
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 7.3e-118 427.9 335 63.0
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 8.0e-117 424.5 255 80.8
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.3e-116 422.9 343 64.1
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 3.0e-116 422.5 306 65.7
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.7e-111 406.8 397 59.4
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 2.3e-111 406.4 353 62.6
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 6.2e-109 398.3 329 64.1
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 3.2e-105 386.0 229 81.2
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 9.2e-105 384.4 531 45.8
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.5e-104 382.5 343 59.2
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 1.2e-101 374.0 368 56.8
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 3.7e-98 362.5 222 78.8
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 6.0e-96 355.1 245 73.9
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 8.1e-85 318.2 193 79.3
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 3.5e-80 302.8 305 55.4
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.7e-74 283.9 166 78.9
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 9.3e-73 278.1 387 40.8
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 6.7e-71 271.9 176 77.3
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 2.8e-69 266.5 224 58.5
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 3.9e-63 246.1 319 43.6
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.9e-58 229.9 142 75.4
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 1.1e-52 211.5 127 82.7
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 5.5e-49 199.1 326 38.0
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 7.4e-46 188.7 344 34.3
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 6.3e-45 185.7 126 71.4
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.5e-38 164.5 98 73.5
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.1e-36 158.3 97 76.3
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 5.0e-34 149.4 84 82.1
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 1.1e-25 121.7 78 73.1
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.2e-24 118.2 64 81.2
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.1e-16 90.9 76 59.2
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 2.3e-15 87.4 56 83.9
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.9e-10 70.5 38 73.7
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 7.5e-06 55.8 59 49.2


User provided reference genes

Program Settings