Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G43310 Arabidopsis lyrata HOM05D001684 ORTHO05D001613 7.1e-15 82.8 43 100.0
BcaC01g04705 Brassica carinata HOM05D001684 ORTHO05D001613 2.8e-11 70.9 37 97.3
A03p28700 Brassica napus HOM05D001684 ORTHO05D001613 2.8e-11 70.9 37 97.3
C03p34710 Brassica napus HOM05D001684 ORTHO05D001613 2.8e-11 70.9 37 97.3
BolC3t15781H Brassica oleracea HOM05D001684 ORTHO05D001613 2.8e-11 70.9 37 97.3
BraA03t12069Z Brassica rapa HOM05D001684 ORTHO05D001613 2.8e-11 70.9 37 97.3
Thhalv10018750m.g Eutrema salsugineum HOM05D001684 ORTHO05D001613 2.8e-11 70.9 37 94.6
Sp6g07930 Schrenkiella parvula HOM05D001684 ORTHO05D001613 2.8e-11 70.9 37 97.3
CARHR260620 Cardamine hirsuta HOM05D001684 ORTHO05D001613 8.1e-11 69.3 37 94.6
BcaB01g02779 Brassica carinata HOM05D001684 ORTHO05D001613 1.8e-10 68.2 37 94.6
Aa31LG9G14970 Aethionema arabicum HOM05D001684 ORTHO05D001613 5.2e-10 66.6 37 91.9
Thhalv10028757m.g Eutrema salsugineum HOM05D001684 ORTHO05D001613 6.8e-10 66.2 37 91.9
THA.LOC104813093 Tarenaya hassleriana HOM05D001684 ORTHO05D001613 2.0e-09 64.7 37 83.8
AL6G43300 Arabidopsis lyrata HOM05D001684 ORTHO05D001613 3.4e-09 63.9 37 89.2
THA.LOC104806774 Tarenaya hassleriana HOM05D001684 ORTHO05D001613 3.4e-09 63.9 37 83.8
CARHR260610 Cardamine hirsuta HOM05D001684 ORTHO05D001613 4.4e-09 63.5 37 89.2
AT4G09670 Arabidopsis thaliana HOM05D001684 ORTHO05D001613 9.9e-09 62.4 37 83.8
Carub.0006s2812 Capsella rubella HOM05D001684 ORTHO05D001613 1.3e-08 62.0 37 86.5
A06p01910 Brassica napus HOM05D001684 ORTHO05D001613 1.7e-08 61.6 35 91.4
BraA06t23407Z Brassica rapa HOM05D001684 ORTHO05D001613 1.7e-08 61.6 35 91.4
Cpa.g.sc26.142 Carica papaya HOM05D001684 ORTHO05D001613 2.2e-08 61.2 37 83.8
Cpa.g.sc26.144 Carica papaya HOM05D001684 ORTHO05D001613 2.9e-08 60.8 37 81.1
BcaC08g43404 Brassica carinata HOM05D001684 ORTHO05D001613 1.1e-07 58.9 35 88.6
C06p07710 Brassica napus HOM05D001684 ORTHO05D001613 1.1e-07 58.9 35 88.6
BolC6t35860H Brassica oleracea HOM05D001684 ORTHO05D001613 1.1e-07 58.9 35 88.6
COL.COLO4_08429 Corchorus olitorius HOM05D001684 ORTHO05D001613 1.4e-07 58.5 34 82.4
Gohir.D05G273800 Gossypium hirsutum HOM05D001684 ORTHO05D001613 1.4e-07 58.5 34 79.4
Gorai.009G287000 Gossypium raimondii HOM05D001684 ORTHO05D001613 1.4e-07 58.5 34 79.4
Thecc.08G197100 Theobroma cacao HOM05D001684 ORTHO05D001613 1.4e-07 58.5 34 79.4
Dinv28222 Davidia involucrata HOM05D001684 ORTHO05D001613 2.4e-07 57.8 37 75.7
Aa31LG6G8340 Aethionema arabicum HOM05D001684 ORTHO05D001613 5.4e-07 56.6 37 73.0
TWI60G0721 Tripterygium wilfordii HOM05D001684 ORTHO05D001613 5.4e-07 56.6 32 87.5
Gohir.A05G271600 Gossypium hirsutum HOM05D001684 ORTHO05D001613 9.2e-07 55.8 33 78.8
Duzib093G0678 Durio zibethinus HOM05D001684 ORTHO05D001613 1.2e-06 55.5 34 76.5
Duzib116G0332 Durio zibethinus HOM05D001684 ORTHO05D001613 1.2e-06 55.5 34 73.5
Migut.H02236 Erythranthe guttata HOM05D001684 ORTHO05D001613 1.2e-06 55.5 32 78.1
FvH4_2g12650 Fragaria vesca HOM05D001684 ORTHO05D001613 1.6e-06 55.1 37 70.3
FAN20G3118 Fragaria x ananassa HOM05D001684 ORTHO05D001613 1.6e-06 55.1 37 70.3
FAN24G1904 Fragaria x ananassa HOM05D001684 ORTHO05D001613 1.6e-06 55.1 37 70.3
FAN27G0157 Fragaria x ananassa HOM05D001684 ORTHO05D001613 1.6e-06 55.1 37 70.3
Sp1g29430 Schrenkiella parvula HOM05D001684 ORTHO05D001613 2.1e-06 54.7 37 73.0
BraA09t38771Z Brassica rapa HOM05D001684 ORTHO05D001613 2.7e-06 54.3 42 64.3
Duzib116G0562 Durio zibethinus HOM05D001684 ORTHO05D001613 2.7e-06 54.3 34 73.5
Duzib116G0832 Durio zibethinus HOM05D001684 ORTHO05D001613 2.7e-06 54.3 34 73.5
PGSC0003DMG400031148 Solanum tuberosum HOM05D001684 ORTHO05D001613 2.7e-06 54.3 36 72.2
BcaC08g43802 Brassica carinata HOM05D001684 ORTHO05D001613 3.5e-06 53.9 42 64.3
C06p11790 Brassica napus HOM05D001684 ORTHO05D001613 3.5e-06 53.9 42 64.3
BolC6t36312H Brassica oleracea HOM05D001684 ORTHO05D001613 3.5e-06 53.9 42 64.3
RcHm_v2.0_Chr6g0273321 Rosa chinensis HOM05D001684 ORTHO05D001613 4.6e-06 53.5 36 69.4
MSTRG.24940 Avicennia marina HOM05D001684 ORTHO05D001613 6.0e-06 53.1 36 72.2
A09p32280 Brassica napus HOM05D001684 ORTHO05D001613 6.0e-06 53.1 42 61.9
CSS0022282 Camellia sinensis var. sinensis HOM05D001684 ORTHO05D001613 6.0e-06 53.1 36 66.7
Peaxi162Scf00226g00059 Petunia axillaris HOM05D001684 ORTHO05D001613 6.0e-06 53.1 36 69.4


User provided reference genes

Program Settings