Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 8.1e-255 883.2 450 100.0
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 3.1e-230 801.6 475 88.6
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 6.3e-223 777.3 473 85.4
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 1.1e-216 756.5 476 83.2
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 7.4e-216 753.8 476 83.0
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 1.1e-214 750.0 476 83.8
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 1.5e-211 739.6 476 81.7
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 1.5e-211 739.6 476 81.7
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 1.5e-211 739.6 476 81.7
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 7.2e-211 737.3 476 81.3
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 8.0e-210 733.8 476 81.1
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 2.7e-202 708.8 477 79.0
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 7.3e-187 657.5 576 64.8
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 4.1e-182 641.7 477 71.1
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 9.2e-182 640.6 480 70.6
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 2.9e-175 619.0 480 68.5
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 6.0e-173 611.3 477 67.3
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 8.6e-172 607.4 480 67.3
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 8.6e-172 607.4 478 66.7
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 4.3e-171 605.1 480 68.3
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 4.3e-171 605.1 478 67.2
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 5.6e-171 604.7 480 65.6
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 7.3e-171 604.4 477 66.7
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 1.2e-170 603.6 474 66.7
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 1.6e-170 603.2 477 67.3
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 1.6e-170 603.2 479 66.2
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 2.8e-170 602.4 473 67.4
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 4.7e-170 601.7 480 67.9
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 8.1e-170 600.9 473 67.2
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 2.6e-168 595.9 480 66.9
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 4.4e-168 595.1 478 68.2
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 4.4e-168 595.1 475 66.3
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 5.8e-168 594.7 480 66.7
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 7.5e-168 594.3 479 65.8
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 2.2e-167 592.8 480 67.5
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 4.9e-167 591.7 477 65.6
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 8.3e-167 590.9 480 66.0
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 1.1e-166 590.5 480 66.2
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 2.1e-165 586.3 480 65.8
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.0e-164 583.9 480 66.0
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 1.0e-164 583.9 480 65.6
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 1.3e-164 583.6 480 66.0
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 1.7e-164 583.2 480 64.8
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 1.7e-164 583.2 480 67.1
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 3.0e-164 582.4 477 64.4
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 6.6e-164 581.3 476 64.3
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 6.6e-164 581.3 478 65.5
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 8.6e-164 580.9 476 66.0
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 2.5e-163 579.3 478 66.3
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 4.3e-163 578.6 480 65.0
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 1.2e-162 577.0 516 61.8
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 2.1e-162 576.2 496 62.9
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 4.7e-162 575.1 476 63.9
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 8.1e-162 574.3 479 64.1
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 1.5e-160 570.1 479 64.9
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 2.0e-160 569.7 485 62.7
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 3.4e-160 568.9 485 62.1
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 4.4e-160 568.5 480 64.0
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 5.8e-160 568.2 485 62.5
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 7.6e-160 567.8 485 62.7
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 7.6e-160 567.8 480 64.2
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 9.9e-160 567.4 481 63.6
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 3.8e-159 565.5 480 63.1
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 4.9e-159 565.1 480 63.5
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 8.4e-159 564.3 477 63.9
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 3.2e-158 562.4 478 63.0
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 4.2e-158 562.0 477 63.9
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 7.1e-158 561.2 479 61.8
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 1.7e-156 556.6 475 61.9
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 2.3e-156 556.2 477 63.3
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 8.7e-156 554.3 480 63.3
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 1.5e-155 553.5 479 62.8
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 1.5e-155 553.5 479 61.0
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 1.2e-154 550.4 511 59.1
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 1.6e-154 550.1 480 62.1
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 3.6e-154 548.9 477 63.7
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 1.8e-153 546.6 471 63.7
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 1.3e-151 540.4 477 62.7
RcHm_v2.0_Chr7g0240361 Rosa chinensis HOM05D001663 ORTHO05D005717 4.9e-151 538.5 422 67.1
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 1.9e-150 536.6 475 60.4
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 2.7e-149 532.7 408 67.6
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 4.6e-149 531.9 478 60.9
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 1.2e-144 517.3 474 61.8
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 1.4e-142 510.4 473 60.0
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 2.4e-142 509.6 534 55.4
AUR62033240 Chenopodium quinoa HOM05D001663 ORTHO05D005717 1.6e-141 506.9 422 63.3
Lsat_1_v5_gn_6_102021 Lactuca sativa HOM05D001663 ORTHO05D005717 4.6e-141 505.4 487 57.5
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 8.7e-140 501.1 478 58.8
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 1.1e-139 500.7 477 58.7
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 1.5e-139 500.4 476 59.0
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 1.4e-137 493.8 409 64.5
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 5.8e-136 488.4 483 56.1
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 4.2e-134 482.3 475 56.4
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 5.5e-134 481.9 376 67.3
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 9.3e-134 481.1 376 68.6
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 9.3e-134 481.1 497 55.5
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.3e-132 477.2 477 56.4
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 3.3e-131 472.6 480 57.1
Hund26324 Selenicereus undatus HOM05D001663 ORTHO05D005717 1.7e-127 460.3 383 65.0
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 8.4e-127 458.0 377 62.9
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 3.5e-125 452.6 443 60.0
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 3.3e-123 446.0 478 51.7
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 5.3e-121 438.7 452 55.3
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 6.7e-116 421.8 339 64.9
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 7.2e-102 375.2 376 52.9
Gohir.A05G268300 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.7e-101 373.2 314 65.9
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 4.4e-99 365.9 454 49.3
CDE05G2350 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 1.7e-98 364.0 341 57.8
MBI02_g34272_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 3.7e-98 362.8 315 62.2
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 1.8e-97 360.5 457 47.0
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 4.1e-97 359.4 450 47.3
Oeu035400.3 Olea europaea HOM05D001663 ORTHO05D005717 3.8e-95 352.8 810 33.6
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 1.5e-94 350.9 457 46.2
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 3.0e-92 343.2 452 46.5
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 8.8e-92 341.7 449 46.1
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 2.0e-91 340.5 452 46.0
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 4.4e-91 339.3 454 44.7
Aa31LG4G7980 Aethionema arabicum HOM05D001663 ORTHO05D005717 8.3e-90 335.1 471 44.2
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 3.1e-89 333.2 450 46.0
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 9.4e-86 321.6 228 69.3
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 1.0e-84 318.2 404 46.3
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 5.2e-84 315.8 371 49.3
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 6.8e-84 315.5 372 49.7
Zm00001eb327970 Zea mays HOM05D001663 ORTHO05D005717 2.6e-83 313.5 443 44.0
Os07g0626300 Oryza sativa ssp. japonica HOM05D001663 ORTHO05D005717 1.2e-80 304.7 404 46.8
Thhalv10018451m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 3.5e-80 303.1 433 44.3
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 7.7e-80 302.0 240 64.6
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 1.8e-73 280.8 489 39.1
arahy.Tifrunner.gnm1.ann1.8X036G Arachis hypogaea HOM05D001663 ORTHO05D005717 2.4e-73 280.4 246 62.2
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 4.3e-70 269.6 250 58.0
Mapoly0103s0077 Marchantia polymorpha HOM05D001663 ORTHO05D005717 1.9e-62 244.2 506 34.2
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 7.8e-48 195.7 191 54.5
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 9.9e-43 178.7 205 47.8
SEGI_08259 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 3.0e-39 167.2 320 37.5
SEGI_31098 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 2.5e-38 164.1 213 46.0
AagrBONN_evm.TU.Sc2ySwM_344.1096 Anthoceros agrestis HOM05D001663 ORTHO05D005717 8.1e-37 159.1 445 28.8
CBR_g4197 Chara braunii HOM05D001663 ORTHO05D005717 5.1e-31 139.8 517 26.5
Atru.chr13.1296 Acer truncatum HOM05D001663 ORTHO05D005717 2.3e-23 114.4 102 62.7
Actinidia33166 Actinidia chinensis HOM05D001663 ORTHO05D005717 3.1e-20 104.0 106 59.4
Zm00001eb031630 Zea mays HOM05D001663 ORTHO05D005717 4.5e-19 100.1 144 39.6
CDE05G1781 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 1.3e-13 82.0 90 46.7
PRCOL_00005117 Prasinoderma coloniale HOM05D001663 ORTHO05D005717 1.6e-08 65.1 277 26.4
Cre08.g377600 Chlamydomonas reinhardtii HOM05D001663 ORTHO05D005717 1.1e-06 58.9 34 67.6


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