Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G41880 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 2.6e-126 455.3 214 100.0
AL4G20680 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 8.4e-125 450.3 214 98.1
AL7G11610 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.4e-124 449.5 214 98.6
AL2G22210 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.9e-124 449.1 214 98.6
AL5G12750 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 3.2e-124 448.4 214 98.1
AL1G59760 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 9.3e-124 446.8 214 98.1
AL1G50260 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 2.4e-116 422.2 212 93.4
AL2G19880 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.0e-114 416.8 240 85.4
AL9U11430 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 7.7e-86 320.9 212 74.1
AL5G17280 Arabidopsis lyrata HOM05D039756 ORTHO05D011313 2.4e-23 113.2 187 34.8
Carub.0006s2623 Capsella rubella HOM05D012762 ORTHO05D011313 7.1e-23 111.7 216 29.6
Carub.0001s3686 Capsella rubella HOM05D012762 ORTHO05D011313 2.1e-22 110.2 220 29.5
Carub.0002s1156 Capsella rubella HOM05D011333 ORTHO05D011313 1.3e-21 107.5 229 30.1
AL7G50330 Arabidopsis lyrata HOM05D039756 ORTHO05D011313 3.9e-21 105.9 185 32.4
Carub.0007s3609 Capsella rubella HOM05D011333 ORTHO05D011313 1.1e-20 104.4 242 29.3
Carub.0149s0001 Capsella rubella HOM05D011333 ORTHO05D011313 1.5e-20 104.0 222 29.3
Carub.0012s0012 Capsella rubella HOM05D012762 ORTHO05D011313 5.6e-20 102.1 230 27.4
Carub.0001s3421 Capsella rubella HOM05D012762 ORTHO05D011313 1.6e-19 100.5 221 29.4
Carub.0016s0014 Capsella rubella HOM05D012762 ORTHO05D011313 2.1e-19 100.1 220 27.7
Carub.0001s3685 Capsella rubella HOM05D012762 ORTHO05D011313 4.4e-17 92.4 219 26.9
Carub.0012s0009 Capsella rubella HOM05D011333 ORTHO05D011313 2.1e-14 83.6 208 27.4
Carub.0003s2757 Capsella rubella HOM05D011333 ORTHO05D011313 5.1e-13 79.0 218 27.1
Carub.0001s3396 Capsella rubella HOM05D011333 ORTHO05D011313 8.6e-13 78.2 204 26.0
Carub.0076s0002 Capsella rubella HOM05D012762 ORTHO05D011313 1.9e-12 77.0 203 26.6
AL5G12730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.8e-11 73.2 211 26.5
AL9U11480 Arabidopsis lyrata HOM05D000353 ORTHO05D011313 2.8e-11 73.2 211 26.5
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 2.8e-11 73.2 192 27.1
AL8G21940 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.7e-11 72.4 211 26.5
AL1G50720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.1e-11 71.6 211 26.5
AL2G19900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.9e-10 68.6 211 26.5
AL2G22230 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.9e-10 68.6 211 26.5
AL4G20700 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.9e-10 68.6 211 26.5
AL6G41900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.9e-10 68.6 211 26.5
AL7G11630 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.9e-10 68.6 211 26.5
BcaC04g21059 Brassica carinata HOM05D000353 ORTHO05D000174 3.4e-09 66.2 204 26.0
BcaC03g17782 Brassica carinata HOM05D000353 ORTHO05D000174 4.4e-09 65.9 204 26.0
C01p40510 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-08 63.5 209 26.3
BcaB03g16823 Brassica carinata HOM05D000353 ORTHO05D000174 2.9e-08 63.2 203 25.6
BcaC02g07867 Brassica carinata HOM05D000353 ORTHO05D000174 2.9e-08 63.2 204 25.5
C08p32530 Brassica napus HOM05D000353 ORTHO05D000174 3.8e-08 62.8 205 24.9
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 8.4e-08 61.6 212 27.4
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 1.1e-07 61.2 218 26.1
C01p31900 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-07 61.2 205 24.9
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 1.4e-07 60.8 212 26.4
C09p29030 Brassica napus HOM05D000353 ORTHO05D000174 4.2e-07 59.3 83 33.7
BolC7t44430H Brassica oleracea HOM05D000353 ORTHO05D000174 4.2e-07 59.3 83 33.7
BcaC01g03267 Brassica carinata HOM05D000353 ORTHO05D000174 5.4e-07 58.9 208 25.0
AL2G19910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.2e-06 57.8 214 25.7
BcaB03g15167 Brassica carinata HOM05D000353 ORTHO05D000174 1.6e-06 57.4 80 35.0
AL5G12720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.1e-06 57.0 214 25.7
AL6G41910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.1e-06 57.0 214 25.7
BcaC05g28066 Brassica carinata HOM05D000353 ORTHO05D000174 2.1e-06 57.0 205 23.9
BcaC07g40033 Brassica carinata HOM05D000353 ORTHO05D000174 2.1e-06 57.0 205 23.9
C05p40800 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-06 57.0 205 23.9
BcaC03g14055 Brassica carinata HOM05D000353 ORTHO05D000174 2.7e-06 56.6 83 31.3
BcaNung03554 Brassica carinata HOM05D000353 ORTHO05D000174 2.7e-06 56.6 83 31.3
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 2.7e-06 56.6 226 24.8
BcaC08g47014 Brassica carinata HOM05D000353 ORTHO05D000174 7.8e-06 55.1 80 33.8
BolC9t53770H Brassica oleracea HOM05D000353 ORTHO05D000174 7.8e-06 55.1 80 32.5


User provided reference genes

Program Settings