Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G40510 Arabidopsis lyrata HOM05D004872 ORTHO05D006050 1.2e-25 119.0 58 100.0
Thhalv10019047m.g Eutrema salsugineum HOM05D004872 ORTHO05D006050 6.8e-13 76.6 57 64.9
Sp4g26910 Schrenkiella parvula HOM05D004872 ORTHO05D006050 2.9e-11 71.2 58 60.3
AL7G43510 Arabidopsis lyrata HOM05D004872 ORTHO05D006050 2.4e-10 68.2 53 60.4
Carub.0004s2739 Capsella rubella HOM05D004872 ORTHO05D006050 1.2e-09 65.9 57 56.1
Aa31LG1G26360 Aethionema arabicum HOM05D004872 ORTHO05D006050 2.1e-09 65.1 55 60.0
AL225U10020 Arabidopsis lyrata HOM05D004872 ORTHO05D006050 2.1e-09 65.1 52 59.6
Aa31LG9G10050 Aethionema arabicum HOM05D004872 ORTHO05D006050 3.0e-08 61.2 51 58.8
BraA05t19473Z Brassica rapa HOM05D004872 ORTHO05D006050 1.9e-07 58.5 58 55.2
BcaB02g08868 Brassica carinata HOM05D004872 ORTHO05D006050 3.3e-07 57.8 55 50.9
A05p04990 Brassica napus HOM05D004872 ORTHO05D006050 4.3e-07 57.4 58 53.4
BcaC02g12267 Brassica carinata HOM05D004872 ORTHO05D006050 9.5e-07 56.2 58 53.4
C04p05820 Brassica napus HOM05D004872 ORTHO05D006050 9.5e-07 56.2 58 53.4
BolC4t22211H Brassica oleracea HOM05D004872 ORTHO05D006050 9.5e-07 56.2 58 51.7
BcaC02g11364 Brassica carinata HOM05D004872 ORTHO05D006050 3.6e-06 54.3 55 52.7
CARHR140030 Cardamine hirsuta HOM05D004872 ORTHO05D006050 3.6e-06 54.3 57 50.9
Medtr7g096840 Medicago truncatula HOM05D004872 ORTHO05D006050 6.2e-06 53.5 55 49.1


User provided reference genes

Program Settings