Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 3.5e-194 681.4 334 100.0
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 6.4e-180 634.0 336 92.3
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 1.6e-170 602.8 337 88.4
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 8.6e-169 597.0 335 86.9
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 1.1e-166 590.1 335 85.1
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 9.3e-163 577.0 335 83.9
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 2.1e-159 565.8 309 88.7
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 2.9e-148 528.9 339 77.9
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 3.8e-148 528.5 343 77.8
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 3.2e-147 525.4 343 77.0
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 7.9e-146 520.8 334 74.6
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 3.3e-144 515.4 339 77.6
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 3.3e-144 515.4 340 77.9
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 3.3e-144 515.4 340 77.9
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 9.4e-123 444.1 341 64.2
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 2.7e-122 442.6 339 65.2
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 6.1e-122 441.4 342 64.6
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 7.9e-122 441.0 335 64.5
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 1.8e-121 439.9 340 63.8
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 5.1e-121 438.3 342 64.3
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 8.8e-121 437.6 336 63.4
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 1.5e-120 436.8 350 62.9
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 2.0e-120 436.4 332 65.1
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 7.4e-120 434.5 342 63.5
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 2.2e-119 433.0 332 64.8
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 6.3e-119 431.4 341 61.3
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 1.1e-118 430.6 332 63.0
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 1.4e-118 430.3 337 64.4
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 6.9e-118 427.9 336 62.5
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 9.1e-118 427.6 339 61.7
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.5e-117 426.8 335 61.8
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 2.0e-117 426.4 340 62.1
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 2.6e-117 426.0 336 63.1
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 4.5e-117 425.2 334 62.6
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 5.9e-117 424.9 343 61.2
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 7.7e-117 424.5 335 62.4
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 2.9e-116 422.5 336 61.6
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 6.5e-116 421.4 335 60.9
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 6.5e-116 421.4 335 60.3
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.4e-115 420.2 335 62.1
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 1.9e-115 419.9 349 62.2
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 2.5e-115 419.5 341 61.3
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 5.5e-115 418.3 313 64.5
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 7.2e-115 417.9 332 62.3
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 9.4e-115 417.5 339 61.1
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 2.7e-114 416.0 344 61.0
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 3.6e-114 415.6 336 61.0
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 4.7e-114 415.2 331 60.1
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 6.1e-114 414.8 324 64.2
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 1.0e-113 414.1 308 65.6
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 1.0e-113 414.1 301 65.1
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 3.0e-113 412.5 347 60.8
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 3.9e-113 412.1 346 59.8
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 8.8e-113 411.0 305 65.6
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 1.1e-112 410.6 331 63.1
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 2.0e-112 409.8 333 60.7
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 2.6e-112 409.5 350 59.4
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 9.7e-112 407.5 325 60.3
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 2.8e-111 406.0 357 57.1
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 3.7e-111 405.6 342 59.9
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 4.8e-111 405.2 314 62.4
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 8.2e-111 404.4 309 62.5
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.4e-110 403.7 301 65.8
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.4e-110 403.7 301 63.8
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 1.4e-110 403.7 346 58.7
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 1.8e-110 403.3 344 59.0
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 2.4e-110 402.9 324 60.8
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 2.4e-110 402.9 337 60.5
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 2.0e-109 399.8 316 61.4
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 5.9e-109 398.3 312 63.1
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 1.0e-108 397.5 352 57.4
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.3e-108 397.1 313 60.1
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.7e-108 396.7 308 63.0
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 2.9e-108 396.0 309 64.1
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 6.5e-108 394.8 313 59.7
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.5e-107 393.7 335 60.6
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 1.9e-107 393.3 312 60.9
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 1.9e-107 393.3 356 58.7
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 5.5e-107 391.7 346 56.1
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.6e-106 390.2 312 63.8
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 4.7e-106 388.7 335 60.3
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.1e-102 377.5 347 57.1
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.8e-102 376.7 303 62.7
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 2.4e-102 376.3 312 60.3
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 4.1e-102 375.6 324 59.3
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.9e-99 366.7 285 64.6
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 2.7e-98 362.8 305 58.7
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 6.1e-98 361.7 351 53.8
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 1.8e-97 360.1 271 62.0
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 2.6e-96 356.3 289 60.6
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 3.7e-95 352.4 309 58.9
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 8.3e-95 351.3 215 74.4
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 4.5e-93 345.5 271 62.7
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 1.0e-92 344.4 237 66.2
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 5.0e-92 342.0 323 56.7
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 8.5e-92 341.3 252 66.3
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 4.1e-86 322.4 347 49.3
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 7.7e-85 318.2 304 53.0
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 1.1e-83 314.3 278 57.2
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 1.5e-75 287.3 342 46.5
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 2.1e-74 283.5 248 59.7
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 7.0e-70 268.5 242 50.8
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 9.5e-67 258.1 293 46.1
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 4.7e-66 255.8 305 44.3
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.6e-64 250.0 286 46.2
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 1.0e-60 238.0 216 56.5
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 4.3e-59 232.6 221 55.2
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 9.5e-59 231.5 242 45.5
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 2.0e-56 223.8 197 57.9
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 7.6e-56 221.9 310 41.3
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.1e-54 218.0 228 52.6
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 7.1e-46 188.7 334 36.5
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 3.5e-45 186.4 145 70.3
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.9e-44 183.0 193 46.1
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 3.1e-41 173.3 164 51.8
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 7.6e-32 142.1 114 56.1
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 2.1e-26 124.0 193 42.0
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 4.9e-23 112.8 151 45.7
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 5.5e-22 109.4 53 96.2
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 1.8e-12 77.8 167 38.3
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 2.4e-09 67.4 101 40.6
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 5.5e-06 56.2 33 69.7


User provided reference genes

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