Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 0.0e+00 1167.9 725 100.0
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 1.7e-302 1042.3 740 89.6
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 2.2e-262 909.1 730 80.7
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 5.2e-251 871.3 750 77.3
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 1.7e-241 839.7 746 73.3
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 1.6e-239 833.2 741 71.3
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 2.7e-236 822.4 743 72.5
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 2.7e-236 822.4 743 72.5
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 4.4e-234 815.1 743 74.0
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 1.3e-230 803.5 741 71.8
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 9.2e-224 780.8 741 69.1
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 2.8e-212 742.7 736 72.7
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 1.7e-201 706.8 756 66.8
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 9.0e-179 631.3 758 61.7
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 1.0e-153 548.1 450 73.6
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 2.7e-135 486.9 777 46.5
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 6.1e-135 485.7 744 48.3
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 1.4e-134 484.6 687 45.9
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 2.6e-130 470.3 725 48.4
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 3.2e-128 463.4 726 48.8
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 9.4e-128 461.8 732 47.4
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 1.2e-127 461.5 778 42.8
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 1.0e-126 458.4 790 46.6
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 6.3e-124 449.1 730 46.8
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 1.1e-120 438.3 763 46.4
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 1.5e-120 438.0 702 50.9
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 3.2e-120 436.8 749 45.0
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 2.7e-119 433.7 763 44.8
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 3.6e-119 433.3 727 42.8
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 3.6e-119 433.3 738 41.3
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 1.4e-118 431.4 761 45.3
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.5e-117 427.9 730 46.4
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 3.4e-117 426.8 546 50.4
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 3.4e-117 426.8 759 48.5
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 4.4e-117 426.4 816 39.3
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 3.7e-116 423.3 841 39.0
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.4e-115 421.4 545 46.2
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 2.0e-114 417.5 726 46.3
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 5.9e-114 416.0 822 41.0
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.0e-113 415.2 726 46.4
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 1.0e-113 415.2 751 43.1
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 2.9e-113 413.7 552 47.8
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 4.2e-112 409.8 774 39.0
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 5.5e-112 409.5 743 41.7
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 1.0e-110 405.2 772 39.1
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 1.8e-110 404.4 735 40.8
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 1.2e-109 401.7 799 38.5
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 2.0e-109 401.0 540 46.3
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 9.8e-109 398.7 717 39.3
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 2.2e-108 397.5 804 38.2
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 8.3e-108 395.6 806 37.8
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 8.3e-108 395.6 814 38.5
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 2.4e-107 394.0 782 44.6
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.2e-106 391.7 813 36.7
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 1.2e-106 391.7 551 48.1
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 3.9e-105 386.7 799 38.0
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 1.6e-103 381.3 737 38.9
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 2.8e-103 380.6 835 37.5
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 4.7e-103 379.8 786 37.4
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 6.1e-103 379.4 788 36.9
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 1.4e-102 378.3 798 37.3
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 3.1e-102 377.1 739 43.6
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 1.7e-100 371.3 801 36.8
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 1.3e-97 361.7 503 46.7
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 1.9e-96 357.8 485 45.6
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 2.5e-96 357.5 719 37.7
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 9.5e-96 355.5 738 46.6
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 1.1e-94 352.1 723 37.5
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 1.1e-94 352.1 741 41.8
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 3.1e-94 350.5 769 37.8
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 1.1e-91 342.0 774 36.0
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 2.4e-91 340.9 573 44.0
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 2.1e-90 337.8 536 42.4
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 1.0e-89 335.5 468 47.0
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 4.4e-85 320.1 542 43.5
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 1.3e-84 318.5 495 41.4
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 3.1e-78 297.4 561 38.3
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 5.8e-77 293.1 403 45.2
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 6.4e-76 289.7 423 43.5
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 2.8e-71 274.2 778 33.8
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 1.2e-69 268.9 765 33.1
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 7.1e-59 233.0 602 33.9
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 7.1e-59 233.0 730 31.5
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 1.1e-56 225.7 510 34.3
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 4.6e-50 203.8 478 35.8
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.5e-48 198.0 389 38.6
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 6.2e-47 193.4 311 42.8
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 4.2e-43 180.6 269 45.4
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 1.0e-41 176.0 505 34.1
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 4.5e-37 160.6 510 27.8
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 9.4e-27 126.3 350 32.3
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 9.7e-24 116.3 358 32.4
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 5.9e-21 107.1 367 32.2
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 1.1e-19 102.8 184 39.1
CARHR259620 Cardamine hirsuta HOM05D001955 ORTHO05D001917 1.1e-16 92.8 140 47.9
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 6.3e-15 87.0 192 35.9
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 2.5e-11 75.1 74 55.4
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 7.2e-11 73.6 74 54.1
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 7.2e-11 73.6 74 52.7
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 6.1e-10 70.5 70 52.9
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 8.8e-09 66.6 83 47.0
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 3.4e-08 64.7 128 29.7
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 1.3e-07 62.8 110 40.9
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.8e-07 61.6 59 57.6
CARHR119200 Cardamine hirsuta HOM05D007213 ORTHO05D009165 1.4e-06 59.3 51 66.7
HPP92_019588 Vanilla planifolia HOM05D007213 ORTHO05D009165 4.1e-06 57.8 129 41.1


User provided reference genes

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