Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G36640 Arabidopsis lyrata HOM05D007824 ORTHO05D009875 1.9e-15 84.7 43 100.0
AT5G24980 Arabidopsis thaliana HOM05D007824 ORTHO05D009875 3.5e-14 80.5 43 95.3
Carub.0006s2284 Capsella rubella HOM05D007824 ORTHO05D009875 3.5e-14 80.5 43 93.0
Thhalv10005256m.g Eutrema salsugineum HOM05D007824 ORTHO05D009875 7.3e-12 72.8 43 83.7
Aa31LG11G4150 Aethionema arabicum HOM05D007824 ORTHO05D009875 1.6e-11 71.6 43 83.7
C07p42800 Brassica napus HOM05D007824 ORTHO05D009875 3.6e-11 70.5 43 81.4
BolC7t44808H Brassica oleracea HOM05D061710 ORTHO05D009875 3.6e-11 70.5 43 81.4
BraA06t26498Z Brassica rapa HOM05D007824 ORTHO05D009875 3.6e-11 70.5 43 81.4
THA.LOC104803330 Tarenaya hassleriana HOM05D007824 ORTHO05D009875 9.9e-09 62.4 39 76.9
Aa31LG3G16350 Aethionema arabicum HOM05D007824 ORTHO05D009875 2.9e-08 60.8 36 80.6
CARHR202570 Cardamine hirsuta HOM05D007824 ORTHO05D009875 5.4e-07 56.6 36 77.8
Thhalv10015471m.g Eutrema salsugineum HOM05D007824 ORTHO05D009875 5.4e-07 56.6 36 77.8
Duzib168G1878 Durio zibethinus HOM05D007824 ORTHO05D009875 2.1e-06 54.7 39 64.1
Manes.03G006300 Manihot esculenta HOM05D007824 ORTHO05D009875 2.1e-06 54.7 39 64.1
Gohir.A13G178900 Gossypium hirsutum HOM05D007824 ORTHO05D009875 2.7e-06 54.3 39 64.1
Gohir.D13G187000 Gossypium hirsutum HOM05D007824 ORTHO05D009875 2.7e-06 54.3 39 64.1
AL6G21300 Arabidopsis lyrata HOM05D007824 ORTHO05D009875 3.5e-06 53.9 38 68.4
Sed0025864 Sechium edule HOM05D007824 ORTHO05D009875 3.5e-06 53.9 39 66.7
Thecc.09G011700 Theobroma cacao HOM05D007824 ORTHO05D009875 3.5e-06 53.9 39 64.1
Carub.0006s0922 Capsella rubella HOM05D007824 ORTHO05D009875 4.6e-06 53.5 38 65.8
Ciclev10010135m.g Citrus clementina HOM05D007824 ORTHO05D009875 4.6e-06 53.5 39 64.1
CiPaw.08G004000 Carya illinoinensis HOM05D007824 ORTHO05D009875 6.0e-06 53.1 39 64.1
ClCG05G016050 Citrullus lanatus HOM05D007824 ORTHO05D009875 6.0e-06 53.1 39 64.1
Potri.018G014101 Populus trichocarpa HOM05D007824 ORTHO05D009875 6.0e-06 53.1 36 66.7


User provided reference genes

Program Settings