Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G36090 Arabidopsis lyrata HOM05D003457 ORTHO05D009249 7.9e-178 627.1 337 100.0
AT5G24500 Arabidopsis thaliana HOM05D003457 ORTHO05D009249 1.3e-148 530.0 335 88.4
Carub.0006s2232 Capsella rubella HOM05D003457 ORTHO05D009249 6.5e-140 501.1 340 84.1
CARHR188920 Cardamine hirsuta HOM05D003457 ORTHO05D009249 1.6e-125 453.4 345 79.1
Sp2g22840 Schrenkiella parvula HOM05D003457 ORTHO05D009249 6.5e-124 448.0 342 76.9
Thhalv10005511m.g Eutrema salsugineum HOM05D003457 ORTHO05D009249 1.2e-114 417.2 343 75.5
Aa31LG11G3740 Aethionema arabicum HOM05D003457 ORTHO05D009249 1.7e-103 380.2 333 68.8
BcaB07g29912 Brassica carinata HOM05D003457 ORTHO05D009249 5.6e-83 312.0 344 60.8
BcaC03g17967 Brassica carinata HOM05D003457 ORTHO05D009249 1.4e-81 307.4 340 59.1
THA.LOC104798986 Tarenaya hassleriana HOM05D003457 ORTHO05D009249 5.6e-75 285.4 325 54.2
C02p60250 Brassica napus HOM05D003457 ORTHO05D009249 5.8e-72 275.4 307 58.3
BolC2t12082H Brassica oleracea HOM05D003457 ORTHO05D009249 4.2e-70 269.2 307 58.0
A02p40300 Brassica napus HOM05D003457 ORTHO05D009249 9.3e-70 268.1 308 57.5
BraA02t08999Z Brassica rapa HOM05D003457 ORTHO05D009249 3.5e-69 266.2 308 57.8
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 1.1e-35 154.8 262 42.4
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 4.7e-29 132.9 256 39.8
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 1.4e-28 131.3 346 35.3
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 1.4e-28 131.3 346 35.3
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 1.8e-28 131.0 295 36.3
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 1.5e-27 127.9 254 38.6
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 7.0e-25 119.0 269 36.8
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 1.2e-24 118.2 255 35.7
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.6e-24 117.9 340 34.1
Gohir.D04G000050 Gossypium hirsutum HOM05D003457 ORTHO05D009249 3.5e-24 116.7 370 33.0
FvH4_7g32890 Fragaria vesca HOM05D003457 ORTHO05D009249 5.9e-24 115.9 269 36.4
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 7.7e-24 115.5 283 34.6
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.0e-23 115.2 272 36.0
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 1.3e-23 114.8 361 31.9
MD07G1298800 Malus domestica HOM05D003457 ORTHO05D009249 1.3e-23 114.8 294 36.7
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.9e-23 113.6 299 34.1
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.9e-23 113.6 299 34.1
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.9e-23 113.6 299 34.1
MD01G1228100 Malus domestica HOM05D003457 ORTHO05D009249 2.9e-23 113.6 294 36.7
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 8.5e-23 112.1 337 33.8
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 1.5e-22 111.3 247 38.1
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 2.5e-22 110.5 254 37.0
Cfa016162 Carpinus fangiana HOM05D003457 ORTHO05D009249 2.5e-22 110.5 356 33.1
CiPaw.06G041400 Carya illinoinensis HOM05D003457 ORTHO05D009249 9.4e-22 108.6 350 30.6
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 1.2e-21 108.2 365 33.2
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 2.1e-21 107.5 310 33.2
TWI23G0841 Tripterygium wilfordii HOM05D003457 ORTHO05D009249 3.6e-21 106.7 354 32.8
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 4.7e-21 106.3 313 32.3
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 2.3e-20 104.0 344 32.3
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 2.3e-20 104.0 339 33.9
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 2.3e-20 104.0 360 32.8
MBI12_g09299_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009249 4.0e-20 103.2 252 34.1
Nn1g00443 Nelumbo nucifera HOM05D003457 ORTHO05D009249 8.8e-20 102.1 265 34.3
RcHm_v2.0_Chr1g0382841 Rosa chinensis HOM05D003457 ORTHO05D009249 1.1e-19 101.7 259 34.0
SalBow2G2220 Salvia bowleyana HOM05D003457 ORTHO05D009249 1.1e-19 101.7 232 37.1
CsaV3_5G004840 Cucumis sativus L. HOM05D003457 ORTHO05D009249 2.0e-19 100.9 304 32.9
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 2.0e-19 100.9 324 31.5
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 5.7e-19 99.4 239 36.0
PGR142G1344 Punica granatum HOM05D003457 ORTHO05D009249 5.7e-19 99.4 292 34.6
Prupe.2G318600 Prunus persica HOM05D003457 ORTHO05D009249 7.5e-19 99.0 294 34.4
Potri.015G005100 Populus trichocarpa HOM05D003457 ORTHO05D009249 9.7e-19 98.6 336 31.0
TAR629G1045 Trochodendron aralioides HOM05D003457 ORTHO05D009249 1.7e-18 97.8 265 34.0
Eucgr.K00429 Eucalyptus grandis HOM05D003457 ORTHO05D009249 8.2e-18 95.5 313 31.3
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 1.1e-17 95.1 270 34.1
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 1.4e-17 94.7 270 33.0
TAR636G2436 Trochodendron aralioides HOM05D003457 ORTHO05D009249 1.4e-17 94.7 269 33.5
AUR62035619 Chenopodium quinoa HOM05D003457 ORTHO05D009249 2.4e-17 94.0 267 35.6
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 2.4e-17 94.0 270 33.0
Potri.012G021300 Populus trichocarpa HOM05D003457 ORTHO05D009249 2.4e-17 94.0 173 39.9
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 9.1e-17 92.0 345 31.3
Sabra15G0003600 Salix brachista HOM05D003457 ORTHO05D009249 9.1e-17 92.0 249 33.3
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 1.6e-16 91.3 286 31.5
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 2.0e-16 90.9 270 32.6
Sabra12G0012300 Salix brachista HOM05D003457 ORTHO05D009249 2.0e-16 90.9 208 36.5
Ah.07g204690 Amaranthus hybridus HOM05D003457 ORTHO05D009249 3.5e-16 90.1 267 34.1
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 3.5e-16 90.1 238 34.9
DCAR_020371 Daucus carota HOM05D003457 ORTHO05D009249 5.9e-16 89.4 245 33.9
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 5.9e-16 89.4 276 32.2
unitig_90.g27506 Utricularia gibba HOM05D003457 ORTHO05D009249 5.9e-16 89.4 171 40.4
CiPaw.02G048700 Carya illinoinensis HOM05D003457 ORTHO05D009249 1.0e-15 88.6 193 38.3
Glyma.04G228600 Glycine max HOM05D003457 ORTHO05D009249 1.0e-15 88.6 228 35.1
Migut.F00990 Erythranthe guttata HOM05D003457 ORTHO05D009249 1.7e-15 87.8 276 32.6
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 2.2e-15 87.4 374 29.9
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 3.8e-15 86.7 353 30.9
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 5.0e-15 86.3 265 34.7
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 6.5e-15 85.9 270 31.9
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 6.5e-15 85.9 230 33.9
Glyma.06G136400 Glycine max HOM05D003457 ORTHO05D009249 1.5e-14 84.7 231 33.8
Psat5g072040 Pisum sativum HOM05D003457 ORTHO05D009249 1.5e-14 84.7 242 34.3
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 1.9e-14 84.3 277 30.3
CDE01G0392 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 2.5e-14 84.0 247 34.0
Ca_16777_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009249 2.5e-14 84.0 231 34.6
VMungo1309G3135 Vigna mungo HOM05D003457 ORTHO05D009249 2.5e-14 84.0 228 33.3
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 3.2e-14 83.6 241 32.0
Medtr3g092670 Medicago truncatula HOM05D003457 ORTHO05D009249 3.2e-14 83.6 242 34.7
Cc02_g00840 Coffea canephora HOM05D003457 ORTHO05D009249 4.2e-14 83.2 234 32.5
EL10Ac3g05182 Beta vulgaris HOM05D003457 ORTHO05D009249 5.5e-14 82.8 229 35.4
Sabra05G0139600 Salix brachista HOM05D003457 ORTHO05D009249 5.5e-14 82.8 208 34.1
CDE02G1140 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 4.7e-13 79.7 246 31.7
Phvul.009G045300 Phaseolus vulgaris HOM05D003457 ORTHO05D009249 1.4e-12 78.2 228 31.1
Atru.chr12.2426 Acer truncatum HOM05D003457 ORTHO05D009249 8.8e-12 75.5 174 35.6
COL.COLO4_14368 Corchorus olitorius HOM05D003457 ORTHO05D009249 8.8e-12 75.5 102 43.1
SGA_v2.0_scaffold141G35555 Striga asiatica HOM05D003457 ORTHO05D009249 1.5e-11 74.7 315 28.3
Lj1g0002342 Lotus japonicus HOM05D003457 ORTHO05D009249 3.4e-11 73.6 244 32.8
TPR.G33664 Trifolium pratense HOM05D003457 ORTHO05D009249 2.8e-10 70.5 209 30.6
PSO782G2427 Papaver somniferum HOM05D003457 ORTHO05D009249 3.1e-09 67.0 257 28.0
HPP92_015415 Vanilla planifolia HOM05D003457 ORTHO05D009249 3.1e-09 67.0 226 32.7
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 4.1e-09 66.6 298 28.5
Lalb_Chr08g0239631 Lupinus albus HOM05D003457 ORTHO05D009249 4.1e-09 66.6 236 31.8
QL09p007211 Quercus lobata HOM05D003457 ORTHO05D009249 9.1e-09 65.5 241 30.7
ECA233G0397 Erigeron canadensis HOM05D003457 ORTHO05D009249 2.9e-07 60.5 48 60.4


User provided reference genes

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