Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G34100 Arabidopsis lyrata HOM05D008865 ORTHO05D011106 6.4e-78 293.9 137 100.0
AT5G22970 Arabidopsis thaliana HOM05D008865 ORTHO05D011106 2.1e-60 235.7 138 81.2
Carub.0006s2074 Capsella rubella HOM05D008865 ORTHO05D011106 3.8e-46 188.3 135 66.7
CARHR190570 Cardamine hirsuta HOM05D008865 ORTHO05D011106 2.5e-45 185.7 136 66.2
AL8G36590 Arabidopsis lyrata HOM05D008865 ORTHO05D011106 4.2e-37 158.3 139 56.1
Carub.0008s2070 Capsella rubella HOM05D008865 ORTHO05D011106 1.6e-36 156.4 141 56.0
AT5G60000 Arabidopsis thaliana HOM05D008865 ORTHO05D011106 8.8e-35 150.6 139 54.7
Thhalv10015539m.g Eutrema salsugineum HOM05D008865 ORTHO05D011106 5.0e-30 134.8 143 53.1
BraA10t43880Z Brassica rapa HOM05D008865 ORTHO05D011106 4.7e-28 128.3 145 46.9
BcaC04g19616 Brassica carinata HOM05D008865 ORTHO05D011106 5.2e-27 124.8 145 45.5
C09p53610 Brassica napus HOM05D008865 ORTHO05D011106 5.2e-27 124.8 145 45.5
BolC9t58237H Brassica oleracea HOM05D008865 ORTHO05D011106 5.2e-27 124.8 145 45.5
BraA06t24016Z Brassica rapa HOM05D008865 ORTHO05D011106 5.2e-27 124.8 144 46.5
BcaB08g36386 Brassica carinata HOM05D008865 ORTHO05D011106 8.8e-27 124.0 145 46.2
BcaB08g36388 Brassica carinata HOM05D008865 ORTHO05D011106 8.8e-27 124.0 145 46.2
BcaB08g36389 Brassica carinata HOM05D008865 ORTHO05D011106 8.8e-27 124.0 145 46.2
A10p18060 Brassica napus HOM05D008865 ORTHO05D011106 2.6e-26 122.5 145 45.5
Sp6g22410 Schrenkiella parvula HOM05D008865 ORTHO05D011106 5.0e-22 108.2 140 43.6
A03p10990 Brassica napus HOM05D008865 ORTHO05D011106 1.9e-21 106.3 143 44.1
BraA03t10412Z Brassica rapa HOM05D008865 ORTHO05D011106 1.9e-21 106.3 143 44.1
BraA03t10413Z Brassica rapa HOM05D008865 ORTHO05D011106 1.9e-21 106.3 143 44.1
THA.LOC104811283 Tarenaya hassleriana HOM05D008865 ORTHO05D011106 2.5e-21 105.9 123 44.7
A03p11010 Brassica napus HOM05D008865 ORTHO05D011106 1.6e-20 103.2 143 43.4
Aa31LG7G12520 Aethionema arabicum HOM05D008865 ORTHO05D011106 3.6e-20 102.1 133 43.6
BraA03t10408Z Brassica rapa HOM05D008865 ORTHO05D011106 4.7e-20 101.7 135 43.7
BcaB01g04681 Brassica carinata HOM05D008865 ORTHO05D011106 1.4e-19 100.1 138 44.2
BcaB01g04678 Brassica carinata HOM05D008865 ORTHO05D011106 4.0e-19 98.6 136 44.1
BcaC01g06558 Brassica carinata HOM05D008865 ORTHO05D011106 2.0e-18 96.3 143 41.3
C03p12650 Brassica napus HOM05D008865 ORTHO05D011106 2.0e-18 96.3 143 41.3
C03p12670 Brassica napus HOM05D008865 ORTHO05D011106 2.0e-18 96.3 143 41.3
BolC3t13733H Brassica oleracea HOM05D008865 ORTHO05D011106 2.0e-18 96.3 143 41.3
BcaC01g06556 Brassica carinata HOM05D008865 ORTHO05D011106 3.6e-12 75.5 116 42.2
BraA03t10415Z Brassica rapa HOM05D008865 ORTHO05D011106 8.0e-12 74.3 63 58.7
A03p10980 Brassica napus HOM05D008865 ORTHO05D011106 4.0e-11 72.0 61 59.0
BraA03t10409Z Brassica rapa HOM05D008865 ORTHO05D011106 4.0e-11 72.0 61 59.0
BolC3t13736H Brassica oleracea HOM05D008865 ORTHO05D011106 5.7e-10 68.2 63 54.0
C03p12700 Brassica napus HOM05D008865 ORTHO05D011106 1.7e-09 66.6 63 54.0
Aa31sc23G400 Aethionema arabicum HOM05D008865 ORTHO05D011106 2.2e-09 66.2 58 58.6
Thecc.09G331500 Theobroma cacao HOM05D008865 ORTHO05D011106 1.8e-08 63.2 138 31.9


User provided reference genes

Program Settings