Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G33160 Arabidopsis lyrata HOM05D007886 ORTHO05D017386 2.4e-113 412.1 203 100.0
AL6G33180 Arabidopsis lyrata HOM05D007886 ORTHO05D017386 2.3e-71 272.7 239 62.3
Carub.0006s1983 Capsella rubella HOM05D007886 ORTHO05D017386 2.1e-64 249.6 239 59.4
CARHR191360 Cardamine hirsuta HOM05D007886 ORTHO05D017386 1.6e-61 240.0 235 53.6
Carub.0006s1992 Capsella rubella HOM05D007886 ORTHO05D017386 2.2e-50 203.0 236 48.3
A10p18610 Brassica napus HOM05D007886 ORTHO05D017386 4.2e-33 145.6 212 42.0
BraA10t43940Z Brassica rapa HOM05D007886 ORTHO05D017386 1.2e-32 144.1 212 42.0
BcaC04g19556 Brassica carinata HOM05D007886 ORTHO05D017386 2.5e-25 119.8 122 53.3
BraA10t43942Z Brassica rapa HOM05D007886 ORTHO05D010538 1.0e-18 97.8 233 34.8
AT5G22190 Arabidopsis thaliana HOM05D007886 ORTHO05D017386 1.3e-18 97.4 66 65.2
A10p18630 Brassica napus HOM05D007886 ORTHO05D010538 1.7e-18 97.1 233 34.8
C09p54450 Brassica napus HOM05D007886 ORTHO05D010538 2.1e-16 90.1 193 37.8
BcaC04g19554 Brassica carinata HOM05D007886 ORTHO05D010538 2.7e-16 89.7 228 32.0
BcaB01g04738 Brassica carinata HOM05D007886 ORTHO05D010538 5.1e-15 85.5 212 34.9
C09p54520 Brassica napus HOM05D007886 ORTHO05D010538 3.3e-14 82.8 228 32.0
Thhalv10015608m.g Eutrema salsugineum HOM05D007886 ORTHO05D010538 4.3e-14 82.4 140 42.1
BcaC04g19546 Brassica carinata HOM05D007886 ORTHO05D010538 7.4e-14 81.6 229 31.4
BolC9t58314H Brassica oleracea HOM05D007886 ORTHO05D010538 9.7e-14 81.3 220 33.2
BraA10t43943Z Brassica rapa HOM05D007886 ORTHO05D010538 9.7e-14 81.3 210 35.2
Thhalv10016045m.g Eutrema salsugineum HOM05D007886 ORTHO05D010538 9.7e-14 81.3 121 43.0
BcaB01g04728 Brassica carinata HOM05D007886 ORTHO05D010538 1.3e-13 80.9 90 46.7
BcaB04g20726 Brassica carinata HOM05D007886 ORTHO05D010538 1.7e-13 80.5 136 41.9
Carub.0006s1981 Capsella rubella HOM05D007886 ORTHO05D010538 8.2e-13 78.2 237 29.5
AL6G33140 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 1.1e-12 77.8 232 28.4
AT5G22170 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 1.8e-12 77.0 197 33.5
BcaB01g04729 Brassica carinata HOM05D007886 ORTHO05D010538 6.9e-12 75.1 81 46.9
BcaB01g04735 Brassica carinata HOM05D007886 ORTHO05D010538 6.9e-12 75.1 81 46.9
Carub.0006s1985 Capsella rubella HOM05D007886 ORTHO05D010538 6.9e-12 75.1 238 29.0
Carub.0006s1990 Capsella rubella HOM05D007886 ORTHO05D010538 2.0e-11 73.6 129 34.1
BcaB01g04722 Brassica carinata HOM05D007886 ORTHO05D010538 2.6e-11 73.2 201 32.3
BcaB01g04725 Brassica carinata HOM05D007886 ORTHO05D010538 7.7e-11 71.6 210 32.4
C03p12210 Brassica napus HOM05D007886 ORTHO05D010538 7.7e-11 71.6 130 42.3
BolC3t13694H Brassica oleracea HOM05D007886 ORTHO05D010538 7.7e-11 71.6 130 42.3
AL6G33190 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 2.2e-10 70.1 124 33.9
BcaC01g06599 Brassica carinata HOM05D007886 ORTHO05D010538 2.2e-10 70.1 209 32.1
A03p10620 Brassica napus HOM05D007886 ORTHO05D010538 2.9e-10 69.7 130 41.5
BraA03t10374Z Brassica rapa HOM05D007886 ORTHO05D010538 2.9e-10 69.7 130 41.5
Carub.0006s1987 Capsella rubella HOM05D007886 ORTHO05D010538 3.8e-10 69.3 125 40.8
AT5G22150 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 1.4e-09 67.4 115 35.7
AT5G22160 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 7.2e-09 65.1 150 30.7
BcaB01g04732 Brassica carinata HOM05D007886 ORTHO05D010538 9.4e-09 64.7 206 31.6
A10p18650 Brassica napus HOM05D007886 ORTHO05D010538 9.4e-09 64.7 78 46.2
AL5G22320 Arabidopsis lyrata HOM05D007886 ORTHO05D038549 1.2e-08 64.3 190 29.5
BcaB08g36450 Brassica carinata HOM05D007886 ORTHO05D010538 1.6e-08 63.9 210 29.5
AT3G44235 Arabidopsis thaliana HOM05D007886 ORTHO05D038549 3.6e-08 62.8 167 30.5
BolC9t58319H Brassica oleracea HOM05D007886 ORTHO05D010538 3.6e-08 62.8 78 44.9
Carub.0006s1989 Capsella rubella HOM05D007886 ORTHO05D010538 1.0e-07 61.2 225 28.0


User provided reference genes

Program Settings