Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G33150 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 2.1e-85 318.9 158 100.0
AT5G22160 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 7.3e-33 144.4 197 45.2
Carub.0006s1988 Capsella rubella HOM05D007886 ORTHO05D010538 5.7e-30 134.8 201 41.3
AL6G33130 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 3.7e-29 132.1 201 43.3
AL6G33190 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 8.3e-29 131.0 113 59.3
Carub.0006s1984 Capsella rubella HOM05D007886 ORTHO05D010538 8.3e-29 131.0 201 40.3
Carub.0006s1979 Capsella rubella HOM05D007886 ORTHO05D010538 3.3e-25 119.0 194 39.2
AT5G22150 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 5.6e-25 118.2 127 52.8
Carub.0006s1980 Capsella rubella HOM05D007886 ORTHO05D010538 1.6e-24 116.7 215 37.7
Carub.0006s1990 Capsella rubella HOM05D007886 ORTHO05D010538 8.0e-24 114.4 200 37.5
CARHR191380 Cardamine hirsuta HOM05D007886 ORTHO05D010538 3.4e-22 109.0 201 37.3
Carub.0006s1987 Capsella rubella HOM05D007886 ORTHO05D010538 3.5e-19 99.0 200 35.0
BcaB01g04731 Brassica carinata HOM05D007886 ORTHO05D010538 3.7e-13 79.0 72 56.9
BcaB01g04737 Brassica carinata HOM05D007886 ORTHO05D010538 3.7e-13 79.0 72 56.9
BcaC04g19545 Brassica carinata HOM05D007886 ORTHO05D010538 8.3e-13 77.8 103 43.7
A03p10620 Brassica napus HOM05D007886 ORTHO05D010538 8.3e-13 77.8 82 51.2
BraA03t10374Z Brassica rapa HOM05D007886 ORTHO05D010538 8.3e-13 77.8 82 51.2
BcaC01g06600 Brassica carinata HOM05D007886 ORTHO05D010538 1.1e-12 77.4 82 52.4
BolC3t13694H Brassica oleracea HOM05D007886 ORTHO05D010538 1.1e-12 77.4 82 52.4
C03p12210 Brassica napus HOM05D007886 ORTHO05D010538 1.4e-12 77.0 82 52.4
BraA10t43944Z Brassica rapa HOM05D007886 ORTHO05D010538 3.2e-12 75.9 103 42.7
A10p18650 Brassica napus HOM05D007886 ORTHO05D010538 2.7e-11 72.8 86 46.5
C09p54530 Brassica napus HOM05D007886 ORTHO05D010538 2.7e-11 72.8 103 41.7
BcaB01g04727 Brassica carinata HOM05D007886 ORTHO05D010538 1.0e-10 70.9 96 46.9
BolC9t58319H Brassica oleracea HOM05D007886 ORTHO05D010538 1.7e-10 70.1 86 45.3
BcaB04g20724 Brassica carinata HOM05D007886 ORTHO05D010538 2.3e-10 69.7 83 45.8
Thhalv10015632m.g Eutrema salsugineum HOM05D007886 ORTHO05D010538 8.6e-10 67.8 127 40.2
BcaB04g20725 Brassica carinata HOM05D007886 ORTHO05D010538 2.5e-09 66.2 87 44.8
BcaB08g36450 Brassica carinata HOM05D007886 ORTHO05D010538 1.2e-08 63.9 102 41.2
BcaB01g04733 Brassica carinata HOM05D007886 ORTHO05D010538 3.4e-06 55.8 67 47.8
BcaB01g04726 Brassica carinata HOM05D007886 ORTHO05D010538 9.9e-06 54.3 82 43.9


User provided reference genes

Program Settings