Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G33140 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 8.8e-122 440.3 218 100.0
Carub.0006s1989 Capsella rubella HOM05D007886 ORTHO05D010538 8.9e-82 307.4 216 69.0
AT5G22150 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 2.7e-70 269.2 151 89.4
Carub.0006s1985 Capsella rubella HOM05D007886 ORTHO05D010538 3.3e-68 262.3 225 63.6
Carub.0006s1981 Capsella rubella HOM05D007886 ORTHO05D010538 7.4e-60 234.6 222 55.9
Carub.0006s1987 Capsella rubella HOM05D007886 ORTHO05D010538 3.3e-52 209.1 167 67.7
AT5G22170 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 4.5e-49 198.7 212 52.8
BraA10t43942Z Brassica rapa HOM05D007886 ORTHO05D010538 3.2e-47 192.6 230 49.6
AT5G22160 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 5.5e-47 191.8 146 67.1
AL6G33190 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 1.2e-46 190.7 158 62.0
A10p18630 Brassica napus HOM05D007886 ORTHO05D010538 2.1e-46 189.9 230 48.3
Carub.0006s1990 Capsella rubella HOM05D007886 ORTHO05D010538 6.0e-46 188.3 151 66.2
BcaC04g19554 Brassica carinata HOM05D007886 ORTHO05D010538 1.0e-45 187.6 230 48.7
C09p54520 Brassica napus HOM05D007886 ORTHO05D010538 1.6e-43 180.3 223 44.4
BolC9t58314H Brassica oleracea HOM05D007886 ORTHO05D010538 4.8e-43 178.7 223 49.3
BcaC04g19546 Brassica carinata HOM05D007886 ORTHO05D010538 3.1e-42 176.0 225 44.0
Thhalv10016045m.g Eutrema salsugineum HOM05D007886 ORTHO05D010538 3.2e-39 166.0 203 48.3
BcaB01g04728 Brassica carinata HOM05D007886 ORTHO05D010538 9.3e-39 164.5 209 47.4
Thhalv10015608m.g Eutrema salsugineum HOM05D007886 ORTHO05D010538 9.3e-39 164.5 156 54.5
BcaC01g06599 Brassica carinata HOM05D007886 ORTHO05D010538 6.1e-38 161.8 221 46.2
BcaB01g04729 Brassica carinata HOM05D007886 ORTHO05D010538 1.3e-37 160.6 197 45.7
BcaB01g04735 Brassica carinata HOM05D007886 ORTHO05D010538 1.3e-37 160.6 197 45.7
BcaB04g20726 Brassica carinata HOM05D007886 ORTHO05D010538 3.9e-37 159.1 199 45.7
BcaB01g04738 Brassica carinata HOM05D007886 ORTHO05D010538 8.7e-37 157.9 209 45.9
BcaB01g04725 Brassica carinata HOM05D007886 ORTHO05D010538 1.9e-36 156.8 207 46.4
BcaB01g04722 Brassica carinata HOM05D007886 ORTHO05D010538 4.3e-36 155.6 210 47.6
BcaB08g36450 Brassica carinata HOM05D007886 ORTHO05D010538 1.3e-35 154.1 214 42.5
Carub.0006s1983 Capsella rubella HOM05D007886 ORTHO05D017386 1.6e-35 153.7 233 39.5
AL6G33180 Arabidopsis lyrata HOM05D007886 ORTHO05D017386 4.8e-35 152.1 236 38.1
CARHR191360 Cardamine hirsuta HOM05D007886 ORTHO05D017386 1.4e-31 140.6 234 35.9
BolC3t13694H Brassica oleracea HOM05D007886 ORTHO05D010538 1.9e-31 140.2 156 53.8
C03p12210 Brassica napus HOM05D007886 ORTHO05D010538 1.2e-30 137.5 158 52.5
BcaB01g04732 Brassica carinata HOM05D007886 ORTHO05D010538 2.7e-30 136.3 150 52.7
A03p10620 Brassica napus HOM05D007886 ORTHO05D010538 2.7e-30 136.3 156 52.6
BraA03t10374Z Brassica rapa HOM05D007886 ORTHO05D010538 2.7e-30 136.3 156 52.6
BolC9t58319H Brassica oleracea HOM05D007886 ORTHO05D010538 7.9e-30 134.8 148 48.0
C09p54450 Brassica napus HOM05D007886 ORTHO05D010538 1.1e-28 131.0 220 41.4
Carub.0006s1992 Capsella rubella HOM05D007886 ORTHO05D017386 2.0e-28 130.2 231 36.8
A10p18650 Brassica napus HOM05D007886 ORTHO05D010538 5.7e-28 128.6 150 47.3
BraA10t43943Z Brassica rapa HOM05D007886 ORTHO05D010538 5.3e-26 122.1 222 37.4
BraA10t43940Z Brassica rapa HOM05D007886 ORTHO05D017386 9.4e-23 111.3 225 35.1
A10p18610 Brassica napus HOM05D007886 ORTHO05D017386 2.1e-22 110.2 225 34.7
AL5G22320 Arabidopsis lyrata HOM05D007886 ORTHO05D038549 5.3e-18 95.5 182 34.1
AT3G44235 Arabidopsis thaliana HOM05D007886 ORTHO05D038549 4.2e-15 85.9 200 34.0
AL6G33160 Arabidopsis lyrata HOM05D007886 ORTHO05D017386 3.0e-13 79.7 232 28.4
AT5G22190 Arabidopsis thaliana HOM05D007886 ORTHO05D017386 2.6e-12 76.6 120 37.5
BcaC04g19556 Brassica carinata HOM05D007886 ORTHO05D017386 2.2e-11 73.6 111 40.5
BcaB01g04734 Brassica carinata HOM05D007886 ORTHO05D096238 4.8e-11 72.4 97 43.3


User provided reference genes

Program Settings