Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G33130 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 1.9e-113 412.5 212 100.0
AT5G22150 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 4.5e-78 295.0 196 75.5
Carub.0006s1988 Capsella rubella HOM05D007886 ORTHO05D010538 2.7e-75 285.8 203 69.5
Carub.0006s1984 Capsella rubella HOM05D007886 ORTHO05D010538 1.6e-72 276.6 203 70.0
AT5G22160 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 2.7e-67 259.2 184 69.0
Carub.0006s1990 Capsella rubella HOM05D007886 ORTHO05D010538 5.1e-66 255.0 199 63.3
AL6G33190 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 6.7e-66 254.6 199 65.3
Carub.0006s1979 Capsella rubella HOM05D007886 ORTHO05D010538 8.7e-66 254.2 212 64.6
Carub.0006s1987 Capsella rubella HOM05D007886 ORTHO05D010538 5.7e-65 251.5 195 64.1
Carub.0006s1980 Capsella rubella HOM05D007886 ORTHO05D010538 5.3e-63 245.0 203 63.5
CARHR191380 Cardamine hirsuta HOM05D007886 ORTHO05D010538 3.5e-59 232.3 197 60.9
Thhalv10015632m.g Eutrema salsugineum HOM05D007886 ORTHO05D010538 2.6e-46 189.5 204 54.4
A03p10620 Brassica napus HOM05D007886 ORTHO05D010538 3.9e-42 175.6 211 50.2
BraA03t10374Z Brassica rapa HOM05D007886 ORTHO05D010538 3.9e-42 175.6 211 50.2
BcaC01g06600 Brassica carinata HOM05D007886 ORTHO05D010538 1.1e-39 167.5 211 48.3
BolC3t13694H Brassica oleracea HOM05D007886 ORTHO05D010538 1.1e-39 167.5 211 48.3
C03p12210 Brassica napus HOM05D007886 ORTHO05D010538 2.4e-39 166.4 211 48.3
BcaB01g04727 Brassica carinata HOM05D007886 ORTHO05D010538 7.7e-38 161.4 183 50.8
BcaB01g04726 Brassica carinata HOM05D007886 ORTHO05D010538 2.1e-35 153.3 184 49.5
BcaC04g19545 Brassica carinata HOM05D007886 ORTHO05D010538 1.8e-34 150.2 201 44.3
A10p18650 Brassica napus HOM05D007886 ORTHO05D010538 2.3e-34 149.8 184 47.3
BraA10t43944Z Brassica rapa HOM05D007886 ORTHO05D010538 3.0e-34 149.4 184 47.3
C09p54530 Brassica napus HOM05D007886 ORTHO05D010538 1.5e-33 147.1 184 46.7
BolC9t58319H Brassica oleracea HOM05D007886 ORTHO05D010538 2.0e-33 146.7 184 46.7
BcaB04g20724 Brassica carinata HOM05D007886 ORTHO05D010538 3.7e-32 142.5 211 44.5
BcaB01g04737 Brassica carinata HOM05D007886 ORTHO05D010538 4.8e-32 142.1 185 49.2
AL6G33150 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 4.5e-30 135.6 201 43.3
BcaB04g20725 Brassica carinata HOM05D007886 ORTHO05D010538 4.5e-30 135.6 156 49.4
BcaB01g04730 Brassica carinata HOM05D007886 ORTHO05D010538 1.0e-29 134.4 143 51.7
BcaB01g04732 Brassica carinata HOM05D007886 ORTHO05D010538 1.0e-29 134.4 143 51.7
Thhalv10015608m.g Eutrema salsugineum HOM05D007886 ORTHO05D010538 1.9e-28 130.2 118 59.3
BcaB01g04733 Brassica carinata HOM05D007886 ORTHO05D010538 9.4e-28 127.9 180 45.0
BcaB01g04736 Brassica carinata HOM05D007886 ORTHO05D010538 1.2e-27 127.5 137 51.8
BcaB01g04723 Brassica carinata HOM05D007886 ORTHO05D010538 3.6e-27 125.9 122 56.6
A10p18630 Brassica napus HOM05D007886 ORTHO05D010538 1.8e-26 123.6 183 45.4
BraA10t43941Z Brassica rapa HOM05D007886 ORTHO05D017383 2.0e-25 120.2 163 44.2
AL6G33170 Arabidopsis lyrata HOM05D007886 ORTHO05D017383 1.3e-24 117.5 203 43.3
BraA10t43942Z Brassica rapa HOM05D007886 ORTHO05D010538 1.3e-24 117.5 182 44.0
A10p18620 Brassica napus HOM05D007886 ORTHO05D017383 3.7e-24 115.9 163 43.6
Thhalv10015263m.g Eutrema salsugineum HOM05D007886 ORTHO05D017383 1.7e-21 107.1 175 39.4
AL5G22310 Arabidopsis lyrata HOM05D007886 ORTHO05D031309 3.8e-21 105.9 180 41.1
Sp5g17090 Schrenkiella parvula HOM05D007886 ORTHO05D031309 1.9e-20 103.6 181 39.8
Carub.0006s1982 Capsella rubella HOM05D007886 ORTHO05D017383 3.2e-20 102.8 208 35.6
Carub.0006s1991 Capsella rubella HOM05D007886 ORTHO05D017383 3.2e-20 102.8 161 39.8
BcaB08g36450 Brassica carinata HOM05D007886 ORTHO05D010538 5.5e-20 102.1 150 41.3
BcaB01g04731 Brassica carinata HOM05D007886 ORTHO05D010538 1.0e-18 97.8 118 49.2
AT3G44230 Arabidopsis thaliana HOM05D007886 ORTHO05D031309 2.6e-17 93.2 178 37.6
CARHR191370 Cardamine hirsuta HOM05D007886 ORTHO05D017383 8.0e-11 71.6 135 38.5
BcaC04g19555 Brassica carinata HOM05D007886 ORTHO05D017383 4.4e-09 65.9 146 34.9
AT5G22180 Arabidopsis thaliana HOM05D007886 ORTHO05D017383 8.3e-08 61.6 128 38.3


User provided reference genes

Program Settings