Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G33110 Arabidopsis lyrata HOM05D004598 ORTHO05D005550 6.2e-263 910.2 451 100.0
AT5G22130 Arabidopsis thaliana HOM05D004598 ORTHO05D005550 1.1e-243 846.3 471 89.6
Carub.0006s1977 Capsella rubella HOM05D004598 ORTHO05D005550 5.7e-240 833.9 451 90.9
CARHR191400 Cardamine hirsuta HOM05D004598 ORTHO05D005550 3.0e-233 811.6 452 89.2
Sp6g23050 Schrenkiella parvula HOM05D004598 ORTHO05D005550 2.6e-232 808.5 454 89.9
Thhalv10013575m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 5.9e-229 797.3 438 89.3
BcaC03g13863 Brassica carinata HOM05D004598 ORTHO05D005550 1.5e-216 756.1 454 83.9
BraA02t05641Z Brassica rapa HOM05D004598 ORTHO05D005550 9.7e-216 753.4 451 84.3
BcaB05g22747 Brassica carinata HOM05D004598 ORTHO05D005550 1.3e-215 753.1 440 85.2
Aa31LG1G13300 Aethionema arabicum HOM05D004598 ORTHO05D005550 2.7e-213 745.3 436 83.3
C02p10690 Brassica napus HOM05D004598 ORTHO05D005550 2.7e-213 745.3 454 83.5
BolC2t07140H Brassica oleracea HOM05D004598 ORTHO05D005550 5.9e-213 744.2 436 85.8
THA.LOC104799567 Tarenaya hassleriana HOM05D004598 ORTHO05D005550 4.8e-207 724.5 434 82.5
BcaC07g41302 Brassica carinata HOM05D004598 ORTHO05D005550 1.5e-187 659.8 415 80.7
BolC8t51865H Brassica oleracea HOM05D004598 ORTHO05D005550 5.6e-187 657.9 427 79.2
Atru.chr3.3248 Acer truncatum HOM05D004598 ORTHO05D005550 1.1e-185 653.7 434 72.8
Sabra01G0022600 Salix brachista HOM05D004598 ORTHO05D005550 3.7e-183 645.2 429 72.3
PGR004G0790 Punica granatum HOM05D004598 ORTHO05D005550 1.9e-182 642.9 422 73.9
CiPaw.13G015900 Carya illinoinensis HOM05D004598 ORTHO05D005550 3.2e-182 642.1 436 70.9
TWI18G0003 Tripterygium wilfordii HOM05D004598 ORTHO05D005550 3.2e-182 642.1 436 72.2
Manes.14G169500 Manihot esculenta HOM05D004598 ORTHO05D005550 1.2e-181 640.2 433 71.6
Actinidia02429 Actinidia chinensis HOM05D004598 ORTHO05D005550 1.6e-181 639.8 434 72.8
Potri.001G031500 Populus trichocarpa HOM05D004598 ORTHO05D005550 2.7e-181 639.0 429 70.9
Ah.03g134220 Amaranthus hybridus HOM05D004598 ORTHO05D005550 2.8e-178 629.0 428 69.9
Ca_23979_v3 Cicer arietinum L. HOM05D004598 ORTHO05D005550 2.8e-178 629.0 437 69.3
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 6.2e-178 627.9 420 71.2
Thecc.04G114500 Theobroma cacao HOM05D004598 ORTHO05D005550 8.1e-178 627.5 436 69.7
Medtr8g040610 Medicago truncatula HOM05D004598 ORTHO05D005550 4.0e-177 625.2 437 69.8
Gohir.D07G082500 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.5e-176 623.2 429 70.4
Gorai.001G088100 Gossypium raimondii HOM05D004598 ORTHO05D005550 2.6e-176 622.5 429 70.2
TPR.G8530 Trifolium pratense HOM05D004598 ORTHO05D005550 3.4e-176 622.1 437 69.6
CSS0038935 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 5.8e-176 621.3 434 70.5
CSS0039662 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 5.8e-176 621.3 434 70.5
HanXRQChr03g0066861 Helianthus annuus HOM05D004598 ORTHO05D005550 9.9e-176 620.5 429 69.2
vmacro20477 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.3e-175 620.2 430 71.2
Phvul.005G043300 Phaseolus vulgaris HOM05D004598 ORTHO05D005550 2.9e-175 619.0 429 69.0
Lalb_Chr01g0007411 Lupinus albus HOM05D004598 ORTHO05D005550 8.3e-175 617.5 436 69.3
Cpa.g.sc9.382 Carica papaya HOM05D004598 ORTHO05D005550 1.9e-174 616.3 466 67.0
VMungo1080G1126 Vigna mungo HOM05D004598 ORTHO05D005550 1.9e-174 616.3 436 68.8
Lj3g0020284 Lotus japonicus HOM05D004598 ORTHO05D005550 3.2e-174 615.5 436 69.3
Gohir.A07G077700 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.6e-173 613.2 429 68.5
CSS0010665 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 2.1e-173 612.8 434 70.0
TAR624G0541 Trochodendron aralioides HOM05D004598 ORTHO05D005550 2.1e-173 612.8 434 69.4
Hma1.2p1_0315F.1_g122700 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 3.5e-173 612.1 423 71.9
Duzib133G0026 Durio zibethinus HOM05D004598 ORTHO05D005550 6.0e-173 611.3 467 64.9
MBI19_g29897_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 7.8e-173 610.9 445 67.0
AUR62026210 Chenopodium quinoa HOM05D004598 ORTHO05D005550 1.7e-172 609.8 427 67.7
Cc07_g11450 Coffea canephora HOM05D004598 ORTHO05D005550 8.6e-172 607.4 437 68.4
MBI02_g31690_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 1.5e-171 606.7 445 66.3
Eucgr.H00040 Eucalyptus grandis HOM05D004598 ORTHO05D005550 1.9e-171 606.3 461 65.3
Migut.H02299 Erythranthe guttata HOM05D004598 ORTHO05D005550 2.5e-171 605.9 430 68.1
Sopen02g028050 Solanum pennellii HOM05D004598 ORTHO05D005550 4.3e-171 605.1 432 67.6
PGSC0003DMG400001580 Solanum tuberosum HOM05D004598 ORTHO05D005550 4.3e-171 605.1 432 67.4
Sc16g0001780 Simmondsia chinensis HOM05D004598 ORTHO05D005550 5.6e-171 604.7 427 68.6
Solyc02g083260.3 Solanum lycopersicum HOM05D004598 ORTHO05D005550 7.3e-171 604.4 432 67.6
Peaxi162Scf00300g00120 Petunia axillaris HOM05D004598 ORTHO05D005550 9.5e-171 604.0 431 68.9
SalBow6G7131 Salvia bowleyana HOM05D004598 ORTHO05D005550 9.5e-171 604.0 420 69.8
SalBow2G2153 Salvia bowleyana HOM05D004598 ORTHO05D005550 2.1e-170 602.8 427 68.1
Glyma.08G159600 Glycine max HOM05D004598 ORTHO05D005550 3.6e-170 602.1 436 67.2
MSTRG.2598 Avicennia marina HOM05D004598 ORTHO05D005550 4.7e-170 601.7 434 66.6
Hund05921 Selenicereus undatus HOM05D004598 ORTHO05D005550 4.0e-169 598.6 420 67.6
CAN.G890.18 Capsicum annuum HOM05D004598 ORTHO05D005550 8.9e-169 597.4 429 67.8
Aqoxy3G01530 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.5e-168 596.7 435 66.2
Aqoxy3G01523 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 5.8e-168 594.7 418 67.5
CsaV3_7G001350 Cucumis sativus L. HOM05D004598 ORTHO05D005550 9.9e-168 594.0 432 67.4
Aqoxy6G02901 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 6.4e-167 591.3 435 66.0
MELO3C013319.2 Cucumis melo HOM05D004598 ORTHO05D005550 1.9e-166 589.7 447 65.1
RcHm_v2.0_Chr6g0279191 Rosa chinensis HOM05D004598 ORTHO05D005550 5.4e-166 588.2 425 66.4
FvH4_2g15820 Fragaria vesca HOM05D004598 ORTHO05D005550 4.6e-165 585.1 434 65.7
FAN15G2177 Fragaria x ananassa HOM05D004598 ORTHO05D005550 6.0e-165 584.7 434 65.4
ClCG02G003800 Citrullus lanatus HOM05D004598 ORTHO05D005550 1.7e-164 583.2 428 67.5
Rhsim11G0148800 Rhododendron simsii HOM05D004598 ORTHO05D005550 3.9e-164 582.0 433 67.4
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 6.6e-164 581.3 497 59.4
PSO675G4488 Papaver somniferum HOM05D004598 ORTHO05D005550 8.7e-164 580.9 472 62.3
FAN27G3211 Fragaria x ananassa HOM05D004598 ORTHO05D005550 1.5e-163 580.1 434 65.2
GSVIVG01017167001 Vitis vinifera HOM05D004598 ORTHO05D005550 1.5e-163 580.1 405 70.9
Ciclev10001079m.g Citrus clementina HOM05D004598 ORTHO05D005550 1.9e-163 579.7 426 67.6
Prupe.8G170900 Prunus persica HOM05D004598 ORTHO05D005550 2.5e-163 579.3 426 65.5
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 3.3e-163 578.9 419 69.7
MD05G1127200 Malus domestica HOM05D004598 ORTHO05D005550 1.2e-162 577.0 435 64.8
HanXRQChr14g0454151 Helianthus annuus HOM05D004598 ORTHO05D005550 2.4e-161 572.8 402 68.4
ATR0165G018 Amborella trichopoda HOM05D004598 ORTHO05D005550 7.8e-157 557.8 434 63.1
Dinv08542 Davidia involucrata HOM05D004598 ORTHO05D005550 3.3e-155 552.4 394 70.1
Medtr1g058230 Medicago truncatula HOM05D004598 ORTHO05D005550 1.8e-153 546.6 423 64.5
QL11p052661 Quercus lobata HOM05D004598 ORTHO05D005550 4.0e-153 545.4 451 61.6
Aqoxy3G00619 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 6.4e-151 538.1 435 61.4
AUR62026384 Chenopodium quinoa HOM05D004598 ORTHO05D005550 1.4e-150 537.0 378 67.2
TPR.G6064 Trifolium pratense HOM05D004598 ORTHO05D005550 3.8e-143 512.3 437 60.2
EL10Ac6g13343 Beta vulgaris HOM05D004598 ORTHO05D005550 6.7e-140 501.5 429 59.7
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 1.5e-139 500.4 329 74.8
HPP92_002259 Vanilla planifolia HOM05D004598 ORTHO05D005550 3.3e-139 499.2 390 60.8
SEGI_01084 Sequoiadendron giganteum HOM05D004598 ORTHO05D005550 6.2e-138 495.0 369 64.5
Oeu046543.3 Olea europaea HOM05D004598 ORTHO05D005550 8.4e-135 484.6 410 61.2
C08p43090 Brassica napus HOM05D004598 ORTHO05D005550 3.5e-133 479.2 291 83.5
arahy.Tifrunner.gnm1.ann1.K5F1ZR Arachis hypogaea HOM05D004598 ORTHO05D005550 7.9e-133 478.0 331 69.5
arahy.Tifrunner.gnm1.ann1.B5R5MF Arachis hypogaea HOM05D004598 ORTHO05D005550 1.0e-132 477.6 333 68.8
Hma1.2p1_0315F.1_g122690 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 1.1e-129 467.6 340 70.0
Mapoly0079s0001 Marchantia polymorpha HOM05D004598 ORTHO05D005550 7.7e-128 461.5 428 53.3
Sed0007699 Sechium edule HOM05D004598 ORTHO05D005550 1.0e-127 461.1 339 67.3
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.4e-126 457.2 416 56.7
arahy.Tifrunner.gnm1.ann1.PEW2A9 Arachis hypogaea HOM05D004598 ORTHO05D005550 2.5e-126 456.4 340 65.9
AagrBONN_evm.TU.Sc2ySwM_368.2499 Anthoceros agrestis HOM05D004598 ORTHO05D005550 2.1e-125 453.4 419 56.1
Os03g0670200 Oryza sativa ssp. japonica HOM05D004598 ORTHO05D005550 1.0e-124 451.1 433 53.3
SGA_v2.0_scaffold195G40853 Striga asiatica HOM05D004598 ORTHO05D003143 1.4e-124 450.7 325 66.5
CDE02G1977 Ceratophyllum demersum HOM05D004598 ORTHO05D005550 2.0e-123 446.8 352 63.4
Pp3c1_29840 Physcomitrium patens HOM05D004598 ORTHO05D005550 4.1e-121 439.1 418 53.1
Lj2A487T63 Lonicera japonica HOM05D004598 ORTHO05D005550 6.9e-121 438.3 451 53.0
Thhalv10015361m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 7.9e-117 424.9 235 89.4
SMO118G0414 Selaginella moellendorffii HOM05D004598 ORTHO05D005550 3.9e-116 422.5 408 53.2
Migut.H02295 Erythranthe guttata HOM05D004598 ORTHO05D005550 4.7e-109 399.1 339 59.6
DCAR_027631 Daucus carota HOM05D004598 ORTHO05D005550 2.3e-108 396.7 312 63.5
CBR_g41686 Chara braunii HOM05D004598 ORTHO05D005550 6.7e-108 395.2 578 40.0
vmacro22733 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 6.3e-106 388.7 429 50.3
Migut.H02297 Erythranthe guttata HOM05D004598 ORTHO05D005550 4.8e-98 362.5 278 63.3
arahy.Tifrunner.gnm1.ann1.BN9D0T Arachis hypogaea HOM05D004598 ORTHO05D005550 5.0e-95 352.4 420 48.3
Gohir.A11G320400 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.4e-92 344.4 376 51.3
Manes.07G140750 Manihot esculenta HOM05D004598 ORTHO05D005550 4.4e-91 339.3 283 62.5
unitig_736.g22586 Utricularia gibba HOM05D004598 ORTHO05D005550 1.3e-87 327.8 270 60.0
CSS0036727 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 1.7e-87 327.4 251 65.3
Lsat_1_v5_gn_9_118221 Lactuca sativa HOM05D004598 ORTHO05D005550 5.0e-87 325.9 421 44.2
Actinidia00342 Actinidia chinensis HOM05D004598 ORTHO05D005550 1.8e-84 317.4 357 50.7
ECA240G3480 Erigeron canadensis HOM05D004598 ORTHO05D005550 1.8e-84 317.4 215 68.4
SHI34561 Sapria himalayana HOM05D004598 ORTHO05D005550 5.6e-78 295.8 421 42.5
FAN20G2148 Fragaria x ananassa HOM05D004598 ORTHO05D005550 8.9e-76 288.5 434 39.4
SGA_v2.0_scaffold108G30913 Striga asiatica HOM05D004598 ORTHO05D005550 7.0e-73 278.9 406 41.9
BNapus_Darmor_BZH_scaffold_38p00840 Brassica napus HOM05D004598 ORTHO05D005550 7.8e-72 275.4 163 81.0
BolC9t58552H Brassica oleracea HOM05D004598 ORTHO05D005550 8.0e-69 265.4 259 61.0
MD10G1130600 Malus domestica HOM05D004598 ORTHO05D005550 2.6e-67 260.4 230 57.0
Cre14.g616200 Chlamydomonas reinhardtii HOM05D004598 ORTHO05D005550 9.2e-65 251.9 473 34.5
Zm00001eb096280 Zea mays HOM05D004598 ORTHO05D005550 2.1e-64 250.8 216 59.7
Nn2g12459 Nelumbo nucifera HOM05D004598 ORTHO05D005550 5.1e-63 246.1 149 76.5
Psat6g012400 Pisum sativum HOM05D004598 ORTHO05D005550 8.6e-63 245.4 148 76.4
CSS0012948 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 4.3e-62 243.0 156 73.1
Rhsim11G0028900 Rhododendron simsii HOM05D004598 ORTHO05D005550 2.1e-61 240.7 355 40.8
Cfa027243 Carpinus fangiana HOM05D004598 ORTHO05D005550 6.2e-61 239.2 432 36.1
MCO01G023 Micromonas commoda HOM05D004598 ORTHO05D005550 4.1e-57 226.5 422 36.7
FAN24G1674 Fragaria x ananassa HOM05D004598 ORTHO05D005550 1.4e-52 211.5 147 68.0
TAR160G0002 Trochodendron aralioides HOM05D004598 ORTHO05D005550 8.9e-52 208.8 184 59.8
vmacro01928 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 6.4e-50 202.6 146 70.5
MD10G1130700 Malus domestica HOM05D004598 ORTHO05D005550 3.2e-49 200.3 142 66.9
Dinv26897 Davidia involucrata HOM05D004598 ORTHO05D005550 3.3e-46 190.3 115 75.7
Lj2E933T1 Lonicera japonica HOM05D004598 ORTHO05D005550 8.4e-42 175.6 110 75.5
BcaB01g04740 Brassica carinata HOM05D004598 ORTHO05D005550 5.1e-39 166.4 123 76.4
PRCOL_00005536 Prasinoderma coloniale HOM05D004598 ORTHO05D005550 8.1e-29 132.5 432 27.8
vmacro20475 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 5.3e-28 129.8 84 72.6
vmacro22736 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 5.3e-28 129.8 84 72.6
MELO3C010621.2 Cucumis melo HOM05D004598 ORTHO05D005550 2.5e-25 120.9 91 62.6
Rhsim09G0084000 Rhododendron simsii HOM05D004598 ORTHO05D005550 4.0e-20 103.6 60 80.0
SHI43372 Sapria himalayana HOM05D004598 ORTHO05D005550 1.3e-15 88.6 331 26.0
SHI44717 Sapria himalayana HOM05D004598 ORTHO05D005550 1.1e-14 85.5 113 44.2
CAN.G890.17 Capsicum annuum HOM05D004598 ORTHO05D005550 8.2e-13 79.3 54 66.7
Medtr6g051670 Medicago truncatula HOM05D004598 ORTHO05D005550 1.9e-09 68.2 43 58.1
SHI39035 Sapria himalayana HOM05D004598 ORTHO05D005550 7.2e-09 66.2 52 61.5
SHI53813 Sapria himalayana HOM05D004598 ORTHO05D005550 2.7e-08 64.3 52 57.7
SHI39037 Sapria himalayana HOM05D004598 ORTHO05D005550 3.6e-08 63.9 52 57.7
SHI47796 Sapria himalayana HOM05D004598 ORTHO05D005550 3.6e-08 63.9 54 53.7
SHI53927 Sapria himalayana HOM05D004598 ORTHO05D005550 3.6e-08 63.9 52 57.7


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