Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 5.0e-205 717.6 381 100.0
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 7.3e-180 634.0 386 90.9
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 2.1e-179 632.5 387 88.4
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 4.0e-170 601.7 388 85.3
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 6.4e-160 567.8 398 80.2
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 7.3e-156 554.3 388 78.6
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 6.4e-144 514.6 370 78.6
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 1.1e-143 513.8 383 77.0
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 2.4e-143 512.7 370 78.4
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 2.1e-142 509.6 384 77.6
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 1.5e-140 503.4 385 76.4
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 4.5e-137 491.9 386 75.9
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 7.9e-134 481.1 386 70.7
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 1.6e-126 456.8 362 71.5
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 4.1e-98 362.5 376 55.3
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 2.6e-97 359.8 382 55.8
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 3.8e-96 355.9 369 57.2
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 1.9e-95 353.6 370 55.1
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 1.6e-94 350.5 377 57.3
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 3.6e-94 349.4 380 54.2
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 3.6e-94 349.4 369 56.9
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 1.0e-93 347.8 384 53.1
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.4e-93 347.4 372 54.6
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 2.3e-93 346.7 366 54.1
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 5.2e-93 345.5 373 54.7
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 9.7e-92 341.3 384 52.6
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 3.7e-91 339.3 385 54.3
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 3.1e-90 336.3 375 54.7
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 7.0e-90 335.1 369 52.0
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 1.2e-89 334.3 374 53.2
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 2.7e-89 333.2 391 51.9
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 3.5e-89 332.8 376 53.5
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 5.0e-88 328.9 375 52.5
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 8.5e-88 328.2 388 51.0
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 1.9e-87 327.0 372 54.0
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 4.2e-87 325.9 375 52.8
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 4.2e-87 325.9 365 52.1
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 1.2e-86 324.3 368 51.1
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 1.6e-86 323.9 249 73.5
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 2.7e-86 323.2 370 51.4
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 8.0e-86 321.6 373 50.4
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 1.0e-85 321.2 389 49.6
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 1.0e-85 321.2 370 52.4
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 3.0e-85 319.7 370 53.0
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 4.0e-85 319.3 374 51.9
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 8.8e-85 318.2 366 52.7
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 2.6e-84 316.6 377 50.7
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 3.4e-84 316.2 379 50.7
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 4.4e-84 315.8 373 52.5
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 9.8e-84 314.7 380 51.3
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 2.8e-83 313.2 366 50.0
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 5.4e-82 308.9 406 49.5
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 9.1e-82 308.1 380 49.2
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 2.0e-81 307.0 373 49.3
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 2.7e-81 306.6 384 50.0
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 1.3e-80 304.3 379 48.8
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 1.7e-80 303.9 422 47.2
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 3.8e-80 302.8 375 51.5
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 6.6e-80 302.0 375 50.9
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 8.6e-80 301.6 383 49.1
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 2.5e-79 300.1 452 42.9
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 3.3e-79 299.7 407 47.4
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 1.2e-78 297.7 387 48.8
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 1.6e-78 297.4 377 49.9
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 4.7e-78 295.8 371 49.3
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 1.0e-77 294.7 384 48.7
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 2.3e-77 293.5 231 71.0
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 1.2e-76 291.2 371 47.7
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 7.5e-76 288.5 274 58.8
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 2.2e-75 287.0 326 52.1
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 3.2e-74 283.1 364 48.1
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 6.6e-72 275.4 271 53.9
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 3.3e-71 273.1 380 48.7
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 7.5e-68 261.9 239 57.3
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 9.8e-68 261.5 376 46.0
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 1.3e-67 261.2 229 59.0
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 1.9e-63 247.3 259 52.9
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 1.2e-62 244.6 379 41.7
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 4.7e-62 242.7 247 55.1
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 1.8e-61 240.7 371 45.0
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 9.8e-60 235.0 243 53.9
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 3.7e-59 233.0 228 52.2
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 4.9e-59 232.6 230 56.1
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 8.3e-59 231.9 255 53.3
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 9.2e-58 228.4 234 51.7
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 4.6e-57 226.1 286 50.3
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 6.0e-57 225.7 375 41.9
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 7.8e-57 225.3 248 52.4
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 3.3e-55 219.9 368 41.8
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 4.3e-55 219.5 377 42.7
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 7.3e-55 218.8 470 38.3
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 4.7e-54 216.1 341 42.8
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 1.1e-53 214.9 147 70.1
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 5.2e-53 212.6 302 46.0
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 3.7e-51 206.5 208 63.0
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 1.2e-49 201.4 369 39.0
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 1.6e-49 201.1 280 42.9
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 3.5e-49 199.9 264 47.3
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 7.8e-49 198.7 216 58.8
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 2.1e-46 190.7 286 44.4
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 6.2e-46 189.1 280 46.4
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 1.8e-45 187.6 152 70.4
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 1.8e-45 187.6 152 70.4
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 7.6e-44 182.2 226 45.6
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 2.4e-42 177.2 235 48.5
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 3.5e-41 173.3 233 45.5
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 6.6e-40 169.1 393 35.9
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 1.5e-39 167.9 232 44.0
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 1.4e-37 161.4 391 35.8
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 3.2e-34 150.2 386 35.5
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 1.6e-33 147.9 137 58.4
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 6.0e-33 146.0 287 39.0
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 3.0e-32 143.7 329 34.0
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 1.8e-24 117.9 234 39.7
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 1.6e-22 111.3 230 38.7
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 1.3e-19 101.7 99 53.5
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 1.9e-18 97.8 73 71.2
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 2.5e-18 97.4 65 70.8
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 2.1e-17 94.4 76 71.1
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 4.6e-17 93.2 56 82.1
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 4.6e-17 93.2 56 82.1
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 6.0e-17 92.8 93 57.0
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 5.1e-16 89.7 287 28.2
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 2.4e-13 80.9 63 65.1
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 5.8e-12 76.3 92 48.9
BcaC04g19543 Brassica carinata HOM05D006712 ORTHO05D008219 7.6e-12 75.9 40 95.0
Cre08.g362850 Chlamydomonas reinhardtii HOM05D006712 ORTHO05D008219 4.8e-06 56.6 148 26.4


User provided reference genes

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