Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 4.9e-120 434.5 219 100.0
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 1.4e-114 416.4 219 95.4
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 2.5e-108 395.6 219 89.5
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 1.6e-107 392.9 221 90.5
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 2.3e-106 389.0 221 90.0
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 5.2e-106 387.9 219 90.0
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 9.8e-105 383.6 219 88.1
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 2.9e-104 382.1 219 88.6
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 2.9e-104 382.1 219 88.6
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 2.9e-104 382.1 219 88.6
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 4.9e-104 381.3 219 87.7
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 5.1e-101 371.3 220 85.9
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 5.6e-92 341.3 234 76.5
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 9.9e-73 277.3 219 63.9
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 2.5e-60 236.1 220 57.3
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 2.1e-59 233.0 220 56.8
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 3.1e-58 229.2 174 65.5
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 1.2e-57 227.3 173 65.3
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 2.0e-57 226.5 198 60.1
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 1.4e-55 220.3 174 63.8
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 1.9e-55 219.9 172 62.2
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 7.2e-55 218.0 173 63.6
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 1.2e-54 217.2 193 59.6
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 1.6e-54 216.9 192 60.4
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 4.6e-54 215.3 174 63.8
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 7.9e-54 214.5 176 63.1
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 1.0e-53 214.2 173 60.1
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 1.0e-53 214.2 226 52.2
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 1.0e-53 214.2 222 52.7
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 1.3e-53 213.8 174 62.1
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 3.0e-53 212.6 220 53.6
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 3.0e-53 212.6 174 64.4
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 3.0e-53 212.6 173 61.8
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 6.7e-53 211.5 217 51.2
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 6.7e-53 211.5 217 52.1
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 1.1e-52 210.7 171 59.6
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 1.1e-52 210.7 174 60.3
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 1.9e-52 209.9 183 54.1
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 7.4e-52 208.0 191 56.0
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 9.7e-52 207.6 196 55.6
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 1.6e-51 206.8 196 50.0
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 1.6e-51 206.8 207 55.6
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 2.2e-51 206.5 194 55.7
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 1.1e-50 204.1 194 55.2
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 4.1e-50 202.2 193 56.0
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 4.1e-50 202.2 192 53.1
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 5.3e-50 201.8 178 57.9
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 1.5e-49 200.3 184 58.2
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 1.5e-49 200.3 152 62.5
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 2.6e-49 199.5 227 49.8
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 2.6e-49 199.5 173 59.0
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 3.4e-49 199.1 200 51.0
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 1.3e-48 197.2 199 52.8
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 1.7e-48 196.8 200 52.0
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 5.0e-48 195.3 199 53.3
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 8.5e-48 194.5 194 54.1
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 8.5e-48 194.5 180 52.8
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 1.4e-47 193.7 202 51.0
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 2.5e-47 193.0 180 52.8
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 2.5e-47 193.0 190 55.8
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 2.5e-47 193.0 177 55.4
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 3.2e-47 192.6 194 54.1
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 9.4e-47 191.0 163 60.1
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.2e-46 190.7 177 52.5
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 7.9e-46 188.0 173 56.1
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 1.0e-45 187.6 127 66.9
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.8e-45 186.8 199 48.2
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 1.8e-45 186.8 213 50.2
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 6.7e-45 184.9 197 51.8
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 1.1e-44 184.1 171 55.0
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 5.7e-44 181.8 198 51.5
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 9.7e-44 181.0 180 52.8
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 1.3e-43 180.6 169 56.2
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 2.8e-43 179.5 287 39.7
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 2.8e-43 179.5 198 49.5
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 4.8e-43 178.7 169 53.3
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 4.8e-43 178.7 170 55.3
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 3.1e-42 176.0 143 58.0
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 3.4e-41 172.6 173 52.6
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 4.5e-41 172.2 140 61.4
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 5.9e-41 171.8 159 51.6
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 2.9e-40 169.5 140 58.6
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 8.5e-40 167.9 160 53.8
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 1.1e-39 167.5 169 51.5
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 5.5e-39 165.2 147 59.2
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 6.1e-38 161.8 155 54.2
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 7.9e-38 161.4 127 60.6
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 3.0e-37 159.5 149 53.7
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 1.5e-36 157.1 140 58.6
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 2.0e-36 156.8 202 45.5
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 1.6e-33 147.1 152 50.7
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 5.9e-33 145.2 149 50.3
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 4.0e-21 105.9 186 37.6
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 1.5e-20 104.0 171 40.9
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 1.3e-19 100.9 99 54.5
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 1.7e-19 100.5 66 74.2
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 3.5e-17 92.8 199 32.7
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 4.5e-17 92.4 198 33.3
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 9.8e-12 74.7 199 29.1
BolC2t07114H Brassica oleracea HOM05D007388 ORTHO05D043137 6.6e-08 62.0 56 60.7


User provided reference genes

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