Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G32760 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 3.2e-46 188.0 89 100.0
AL7G39850 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 7.2e-46 186.8 89 98.9
AL7G18450 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 6.7e-44 180.3 89 94.4
AT4G33110 Arabidopsis thaliana HOM05D003596 ORTHO05D004256 2.0e-43 178.7 89 92.1
Carub.0007s0734 Capsella rubella HOM05D003596 ORTHO05D004256 1.7e-42 175.6 89 91.0
Thhalv10025572m.g Eutrema salsugineum HOM05D003596 ORTHO05D004256 1.4e-41 172.6 89 87.6
A01p05090 Brassica napus HOM05D003596 ORTHO05D004256 1.8e-41 172.2 89 87.6
BraA01t00492Z Brassica rapa HOM05D003596 ORTHO05D004256 1.8e-41 172.2 89 87.6
Sp7g30860 Schrenkiella parvula HOM05D003596 ORTHO05D004256 1.8e-41 172.2 89 88.8
CARHR241140 Cardamine hirsuta HOM05D003596 ORTHO05D004256 3.1e-41 171.4 89 87.6
AT4G33120 Arabidopsis thaliana HOM05D003596 ORTHO05D004256 4.1e-41 171.0 89 86.5
A03p61780 Brassica napus HOM05D003596 ORTHO05D004256 4.1e-41 171.0 89 85.4
BraA03t15215Z Brassica rapa HOM05D003596 ORTHO05D004256 4.1e-41 171.0 89 85.4
BcaC09g52108 Brassica carinata HOM05D003596 ORTHO05D004256 9.1e-41 169.9 89 86.5
C01p05570 Brassica napus HOM05D003596 ORTHO05D004256 9.1e-41 169.9 89 86.5
BolC1t00537H Brassica oleracea HOM05D003596 ORTHO05D004256 9.1e-41 169.9 89 86.5
BolC7t46393H Brassica oleracea HOM05D003596 ORTHO05D004256 9.1e-41 169.9 89 84.3
C07p59490 Brassica napus HOM05D003596 ORTHO05D004256 1.2e-40 169.5 89 84.3
BcaC09g52112 Brassica carinata HOM05D003596 ORTHO05D004256 1.3e-39 166.0 89 84.3
BolC7t46392H Brassica oleracea HOM05D003596 ORTHO05D004256 3.8e-39 164.5 89 80.9
THA.LOC104803717 Tarenaya hassleriana HOM05D003596 ORTHO05D004256 1.9e-38 162.2 89 82.0
PSO210G3757 Papaver somniferum HOM05D003596 ORTHO05D004256 2.7e-37 158.3 89 80.9
MELO3C016892.2 Cucumis melo HOM05D003596 ORTHO05D004256 3.6e-37 157.9 89 79.8
Potri.018G060000 Populus trichocarpa HOM05D003596 ORTHO05D004256 3.6e-37 157.9 89 78.7
Migut.A00103 Erythranthe guttata HOM05D003596 ORTHO05D004256 6.1e-37 157.1 89 78.7
EL10Ac2g03812 Beta vulgaris HOM05D003596 ORTHO05D004256 8.0e-37 156.8 89 78.7
PSO210G4954 Papaver somniferum HOM05D003596 ORTHO05D004256 8.0e-37 156.8 89 79.8
Prupe.1G407700 Prunus persica HOM05D003596 ORTHO05D004256 1.4e-36 156.0 89 77.5
Ciclev10008761m.g Citrus clementina HOM05D003596 ORTHO05D004256 1.8e-36 155.6 88 76.1
CsaV3_4G035870 Cucumis sativus L. HOM05D003596 ORTHO05D004256 1.8e-36 155.6 89 77.5
Sed0005044 Sechium edule HOM05D003596 ORTHO05D004256 1.8e-36 155.6 89 78.7
CAN.G143.21 Capsicum annuum HOM05D003596 ORTHO05D004256 2.3e-36 155.2 89 77.5
FAN15G0358 Fragaria x ananassa HOM05D003596 ORTHO05D004256 2.3e-36 155.2 89 79.8
Lj1g0007600 Lotus japonicus HOM05D003596 ORTHO05D004256 2.3e-36 155.2 89 76.4
THA.LOC104803716 Tarenaya hassleriana HOM05D003596 ORTHO05D004256 2.3e-36 155.2 89 77.5
CANSAT21G2424 Cannabis sativa HOM05D003596 ORTHO05D004256 3.0e-36 154.8 89 78.7
Gohir.A05G040200 Gossypium hirsutum HOM05D003596 ORTHO05D004256 3.0e-36 154.8 89 77.5
Aa31sc651G10 Aethionema arabicum HOM05D003596 ORTHO05D004256 3.9e-36 154.5 79 86.1
Lsat_1_v5_gn_7_60761 Lactuca sativa HOM05D003596 ORTHO05D004256 3.9e-36 154.5 89 75.3
arahy.Tifrunner.gnm1.ann1.YCFU7L Arachis hypogaea HOM05D003596 ORTHO05D004256 5.2e-36 154.1 89 76.4
Sabra18G0052600 Salix brachista HOM05D003596 ORTHO05D004256 5.2e-36 154.1 89 75.3
Aqoxy7G03993 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 6.7e-36 153.7 89 75.3
Cpa.g.sc91.83 Carica papaya HOM05D003596 ORTHO05D004256 6.7e-36 153.7 89 74.2
TPR.G3519 Trifolium pratense HOM05D003596 ORTHO05D004256 6.7e-36 153.7 89 75.3
Ah.10g034070 Amaranthus hybridus HOM05D003596 ORTHO05D004256 8.8e-36 153.3 89 75.3
AUR62009106 Chenopodium quinoa HOM05D003596 ORTHO05D004256 8.8e-36 153.3 89 75.3
AUR62020561 Chenopodium quinoa HOM05D003596 ORTHO05D004256 8.8e-36 153.3 89 76.4
Duzib150G0181 Durio zibethinus HOM05D003596 ORTHO05D004256 8.8e-36 153.3 89 77.5
Gohir.A05G040250 Gossypium hirsutum HOM05D003596 ORTHO05D004256 8.8e-36 153.3 88 76.1
Gohir.D05G041700 Gossypium hirsutum HOM05D003596 ORTHO05D004256 8.8e-36 153.3 89 76.4
MD15G1054300 Malus domestica HOM05D003596 ORTHO05D004256 8.8e-36 153.3 89 76.4
Psat5g035520 Pisum sativum HOM05D003596 ORTHO05D004256 8.8e-36 153.3 89 75.3
FvH4_2g31420 Fragaria vesca HOM05D003596 ORTHO05D004256 1.1e-35 152.9 89 78.7
Gorai.009G042400 Gossypium raimondii HOM05D003596 ORTHO05D004256 1.1e-35 152.9 89 76.4
Medtr3g104740 Medicago truncatula HOM05D003596 ORTHO05D004256 1.1e-35 152.9 89 75.3
Nitab4.5_0002797g0010 Nicotiana tabacum HOM05D003596 ORTHO05D004256 1.1e-35 152.9 89 76.4
QL02p000417 Quercus lobata HOM05D003596 ORTHO05D004256 1.1e-35 152.9 88 76.1
Thecc.09G058900 Theobroma cacao HOM05D003596 ORTHO05D004256 1.1e-35 152.9 89 76.4
vmacro17443 Vaccinium macrocarpon HOM05D003596 ORTHO05D004256 1.1e-35 152.9 89 76.4
vmacro22567 Vaccinium macrocarpon HOM05D003596 ORTHO05D004256 1.1e-35 152.9 89 76.4
COL.COLO4_21105 Corchorus olitorius HOM05D003596 ORTHO05D004256 1.5e-35 152.5 89 75.3
PGR031G3048 Punica granatum HOM05D003596 ORTHO05D004256 1.5e-35 152.5 88 75.0
Sopen08g018080 Solanum pennellii HOM05D003596 ORTHO05D004256 1.5e-35 152.5 89 75.3
Sopen08g018130 Solanum pennellii HOM05D003596 ORTHO05D004256 1.5e-35 152.5 89 75.3
CiPaw.15G034900 Carya illinoinensis HOM05D003596 ORTHO05D004256 2.0e-35 152.1 89 77.5
Ca_15814_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 2.0e-35 152.1 89 76.4
Ca_15848_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 2.0e-35 152.1 89 76.4
SalBow4G3232 Salvia bowleyana HOM05D003596 ORTHO05D004256 2.0e-35 152.1 89 77.5
DCAR_003143 Daucus carota HOM05D003596 ORTHO05D004256 2.6e-35 151.8 89 74.2
Eucgr.C00673 Eucalyptus grandis HOM05D003596 ORTHO05D004256 2.6e-35 151.8 89 76.4
Rhsim05G0069300 Rhododendron simsii HOM05D003596 ORTHO05D004256 2.6e-35 151.8 89 76.4
RcHm_v2.0_Chr6g0311401 Rosa chinensis HOM05D003596 ORTHO05D004256 2.6e-35 151.8 89 77.5
Solyc08g062610.4 Solanum lycopersicum HOM05D003596 ORTHO05D004256 2.6e-35 151.8 89 75.3
AUR62020565 Chenopodium quinoa HOM05D003596 ORTHO05D004256 3.3e-35 151.4 89 75.3
Manes.16G083300 Manihot esculenta HOM05D003596 ORTHO05D004256 3.3e-35 151.4 89 76.4
Oeu018037.2 Olea europaea HOM05D003596 ORTHO05D004256 3.3e-35 151.4 89 73.0
Zm00001eb385240 Zea mays HOM05D003596 ORTHO05D004256 3.3e-35 151.4 89 73.0
CSS0012931 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 4.4e-35 151.0 89 75.3
CSS0037935 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 4.4e-35 151.0 89 75.3
Haze_18139 Corylus avellana HOM05D003596 ORTHO05D004256 4.4e-35 151.0 89 75.3
Dinv12460 Davidia involucrata HOM05D003596 ORTHO05D004256 4.4e-35 151.0 89 76.4
FAN24G3537 Fragaria x ananassa HOM05D003596 ORTHO05D004256 4.4e-35 151.0 89 77.5
HanXRQChr03g0071431 Helianthus annuus HOM05D003596 ORTHO05D004256 4.4e-35 151.0 89 74.2
Nitab4.5_0006016g0010 Nicotiana tabacum HOM05D003596 ORTHO05D004256 5.7e-35 150.6 89 75.3
PSO210G3791 Papaver somniferum HOM05D003596 ORTHO05D004256 5.7e-35 150.6 89 76.4
TAR626G0212 Trochodendron aralioides HOM05D003596 ORTHO05D004256 5.7e-35 150.6 89 73.0
unitig_748.g7532 Utricularia gibba HOM05D003596 ORTHO05D004256 5.7e-35 150.6 88 73.9
Lj8C494T3 Lonicera japonica HOM05D003596 ORTHO05D004256 7.4e-35 150.2 89 76.4
Sopen08g018090 Solanum pennellii HOM05D003596 ORTHO05D004256 7.4e-35 150.2 89 74.2
MSTRG.25976 Avicennia marina HOM05D003596 ORTHO05D004256 9.7e-35 149.8 89 73.0
Gorai.009G042500 Gossypium raimondii HOM05D003596 ORTHO05D004256 1.3e-34 149.4 89 75.3
Nn8g38751 Nelumbo nucifera HOM05D003596 ORTHO05D004256 1.3e-34 149.4 88 73.9
ClCG05G018100 Citrullus lanatus HOM05D003596 ORTHO05D004256 1.7e-34 149.1 84 78.6
Cc08_g11040 Coffea canephora HOM05D003596 ORTHO05D004256 1.7e-34 149.1 88 73.9
MELO3C016893.2 Cucumis melo HOM05D003596 ORTHO05D004256 2.8e-34 148.3 89 74.2
GSVIVG01035424001 Vitis vinifera HOM05D003596 ORTHO05D004256 2.8e-34 148.3 87 75.9
Actinidia29320 Actinidia chinensis HOM05D003596 ORTHO05D004256 3.7e-34 147.9 88 75.0
Cfa017996 Carpinus fangiana HOM05D003596 ORTHO05D004256 3.7e-34 147.9 89 74.2
Glyma.04G054100 Glycine max HOM05D003596 ORTHO05D004256 3.7e-34 147.9 89 71.9
VMungo1309G0065 Vigna mungo HOM05D003596 ORTHO05D004256 3.7e-34 147.9 89 70.8
CSS0026815 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 4.8e-34 147.5 89 74.2
Lj1g0006265 Lotus japonicus HOM05D003596 ORTHO05D004256 4.8e-34 147.5 89 69.7
CiPaw.15G035100 Carya illinoinensis HOM05D003596 ORTHO05D004256 6.3e-34 147.1 85 77.6
TWI63G1485 Tripterygium wilfordii HOM05D003596 ORTHO05D004256 1.1e-33 146.4 89 71.9
Hma1.2p1_0732F.1_g210080 Hydrangea macrophylla HOM05D003596 ORTHO05D004256 1.4e-33 146.0 87 75.9
Os06g0574100 Oryza sativa ssp. japonica HOM05D003596 ORTHO05D004256 1.8e-33 145.6 84 75.0
SGA_v2.0_scaffold64G21855 Striga asiatica HOM05D003596 ORTHO05D004256 1.8e-33 145.6 89 70.8
Lalb_Chr08g0244911 Lupinus albus HOM05D003596 ORTHO05D004256 2.4e-33 145.2 89 71.9
Phvul.009G079900 Phaseolus vulgaris HOM05D003596 ORTHO05D004256 3.1e-33 144.8 89 68.5
Hund03308 Selenicereus undatus HOM05D003596 ORTHO05D004256 3.1e-33 144.8 89 70.8
ATR0051G014 Amborella trichopoda HOM05D003596 ORTHO05D004256 1.2e-32 142.9 89 70.8
Sc06g0001060 Simmondsia chinensis HOM05D003596 ORTHO05D004256 2.0e-32 142.1 89 71.9
ECA240G3089 Erigeron canadensis HOM05D003596 ORTHO05D004256 3.5e-32 141.4 79 78.5
HPP92_023980 Vanilla planifolia HOM05D003596 ORTHO05D004256 4.5e-32 141.0 88 64.8
arahy.Tifrunner.gnm1.ann1.N0QBSQ Arachis hypogaea HOM05D003596 ORTHO05D004256 2.9e-31 138.3 81 72.8
Peaxi162Scf00070g00020 Petunia axillaris HOM05D003596 ORTHO05D004256 2.9e-31 138.3 83 72.3
HPP92_024003 Vanilla planifolia HOM05D003596 ORTHO05D004256 2.9e-31 138.3 88 62.5
CDE02G3165 Ceratophyllum demersum HOM05D003596 ORTHO05D004256 8.5e-31 136.7 84 72.6
Glyma.06G054400 Glycine max HOM05D003596 ORTHO05D004256 1.1e-30 136.3 89 65.2
Sopen08g018100 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-30 134.4 85 69.4
SEGI_31297 Sequoiadendron giganteum HOM05D003596 ORTHO05D004256 7.2e-30 133.7 85 67.1
CiPaw.15G035400 Carya illinoinensis HOM05D003596 ORTHO05D004256 1.8e-28 129.0 89 67.4
AagrBONN_evm.TU.Sc2ySwM_117.2988 Anthoceros agrestis HOM05D003596 ORTHO05D004256 6.7e-28 127.1 88 59.1
Pp3c17_22760 Physcomitrium patens HOM05D003596 ORTHO05D004256 2.6e-27 125.2 89 60.7
Aa31LG7G10160 Aethionema arabicum HOM05D003596 ORTHO05D004256 4.4e-27 124.4 65 83.1
Mapoly0103s0018 Marchantia polymorpha HOM05D003596 ORTHO05D004256 4.4e-27 124.4 89 60.7
CBR_g6365 Chara braunii HOM05D003596 ORTHO05D004256 1.7e-26 122.5 88 58.0
SMO271G0076 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 7.0e-25 117.1 89 53.9
Dinv12458 Davidia involucrata HOM05D003596 ORTHO05D004256 1.2e-24 116.3 71 71.8
Atru.chr7.1921 Acer truncatum HOM05D003596 ORTHO05D004256 7.7e-24 113.6 87 56.3
QL02p000424 Quercus lobata HOM05D003596 ORTHO05D004256 7.7e-24 113.6 70 71.4
MBI05_g40673_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 3.8e-23 111.3 88 54.5
MBI11_g17711_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 5.0e-23 110.9 88 53.4
Lj8A493G26 Lonicera japonica HOM05D003596 ORTHO05D004256 1.1e-22 109.8 89 62.9
PSO063G3496 Papaver somniferum HOM05D003596 ORTHO05D004256 3.2e-22 108.2 90 53.3
HanXRQChr11g0345821 Helianthus annuus HOM05D003596 ORTHO05D004256 4.2e-22 107.8 119 43.7
PSO832G4098 Papaver somniferum HOM05D003596 ORTHO05D004256 2.3e-20 102.1 86 53.5
MBI07_g28657_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 3.0e-20 101.7 90 51.1
MBI05_g40674_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 1.2e-19 99.8 89 51.7
PSO832G1397 Papaver somniferum HOM05D003596 ORTHO05D004256 1.2e-19 99.8 90 47.8
PSO063G0821 Papaver somniferum HOM05D003596 ORTHO05D004256 1.5e-19 99.4 90 46.7
Aqoxy7G04015 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 5.7e-19 97.4 87 47.1
MBI05_g21322_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 5.7e-19 97.4 90 48.9
MCO13G046 Micromonas commoda HOM05D003596 ORTHO05D004256 1.7e-18 95.9 91 46.2
PSO386G0091 Papaver somniferum HOM05D003596 ORTHO05D004256 1.7e-18 95.9 91 49.5
PSO339G1340 Papaver somniferum HOM05D003596 ORTHO05D004256 2.8e-18 95.1 90 46.7
PSO229G0119 Papaver somniferum HOM05D003596 ORTHO05D004256 1.1e-17 93.2 90 45.6
PSO675G3982 Papaver somniferum HOM05D003596 ORTHO05D004256 4.1e-17 91.3 90 44.4
PSO675G8489 Papaver somniferum HOM05D003596 ORTHO05D004256 4.1e-17 91.3 90 44.4
Aqoxy7G01445 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 7.0e-17 90.5 89 46.1
Cre09.g398700 Chlamydomonas reinhardtii HOM05D003596 ORTHO05D004256 1.6e-16 89.4 90 42.2
PSO832G4001 Papaver somniferum HOM05D003596 ORTHO05D004256 3.8e-15 84.7 91 49.5
SMO115G0275 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 3.8e-15 84.7 89 38.2
PSO063G4959 Papaver somniferum HOM05D003596 ORTHO05D004256 1.1e-14 83.2 91 48.4
PSO384G1072 Papaver somniferum HOM05D003596 ORTHO05D004256 1.1e-14 83.2 91 45.1
PSO384G1609 Papaver somniferum HOM05D003596 ORTHO05D004256 1.1e-14 83.2 91 45.1
SMO358G0603 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 4.2e-14 81.3 87 36.8
SMO111G0057 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 2.1e-13 79.0 87 36.8
Psat5g035440 Pisum sativum HOM05D003596 ORTHO05D004256 4.7e-13 77.8 54 61.1
Psat5g131440 Pisum sativum HOM05D003596 ORTHO05D004256 4.7e-13 77.8 54 61.1
ClCG05G018110 Citrullus lanatus HOM05D003596 ORTHO05D004256 6.1e-13 77.4 89 44.9
MBI05_g38197_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 1.0e-12 76.6 70 48.6
MBI12_g10638_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 1.0e-12 76.6 49 67.3
Cfa024591 Carpinus fangiana HOM05D000084 ORTHO05D004256 5.2e-12 74.3 78 41.0
Aqoxy7G04012 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 3.4e-11 71.6 74 47.3
BcaNung02153 Brassica carinata HOM05D003596 ORTHO05D004256 3.4e-11 71.6 40 75.0
PSO386G0153 Papaver somniferum HOM05D003596 ORTHO05D004256 5.7e-11 70.9 77 41.6
MBI05_g18185_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 3.9e-07 58.2 58 39.7
MBI05_g21326_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D002168 1.5e-06 56.2 77 39.0


User provided reference genes

Program Settings