Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 1.7e-57 225.7 109 100.0
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 3.0e-54 214.9 109 94.5
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 1.8e-51 205.7 109 91.7
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 3.8e-49 198.0 109 88.1
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 2.5e-48 195.3 104 88.5
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 1.2e-47 193.0 103 90.3
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 2.7e-47 191.8 104 87.5
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 2.7e-47 191.8 104 87.5
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 3.6e-47 191.4 104 88.5
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 3.6e-47 191.4 103 89.3
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 8.0e-47 190.3 104 88.5
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 8.0e-47 190.3 103 88.3
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 2.3e-46 188.7 104 86.5
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 2.3e-46 188.7 103 89.3
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 2.3e-46 188.7 103 89.3
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 1.2e-42 176.4 108 78.7
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 1.5e-32 142.9 85 78.8
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 2.5e-32 142.1 91 74.7
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 3.2e-32 141.7 91 73.6
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 5.5e-32 141.0 94 72.3
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 5.5e-32 141.0 85 77.6
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 7.2e-32 140.6 85 76.5
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.6e-31 139.4 91 72.5
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 2.7e-31 138.7 95 72.6
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 3.6e-31 138.3 96 70.8
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 4.7e-31 137.9 99 67.7
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 6.1e-31 137.5 91 72.5
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 6.1e-31 137.5 90 73.3
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 8.0e-31 137.1 91 71.4
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 8.0e-31 137.1 90 73.3
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 8.0e-31 137.1 81 76.5
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.0e-30 136.7 94 68.1
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.0e-30 136.7 94 68.1
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 1.0e-30 136.7 84 76.2
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 1.4e-30 136.3 91 71.4
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 1.4e-30 136.3 101 70.3
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 1.8e-30 136.0 78 75.6
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 1.8e-30 136.0 97 62.9
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 1.8e-30 136.0 105 68.6
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 2.3e-30 135.6 89 73.0
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 5.2e-30 134.4 81 79.0
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 5.2e-30 134.4 74 82.4
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 5.2e-30 134.4 94 68.1
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 6.8e-30 134.0 95 63.2
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 6.8e-30 134.0 93 73.1
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 8.8e-30 133.7 88 69.3
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 8.8e-30 133.7 78 76.9
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 8.8e-30 133.7 79 79.7
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 1.2e-29 133.3 102 63.7
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 1.2e-29 133.3 95 63.2
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 2.0e-29 132.5 81 72.8
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 2.6e-29 132.1 72 83.3
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 2.6e-29 132.1 99 65.7
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 3.4e-29 131.7 74 78.4
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 3.4e-29 131.7 84 71.4
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 5.7e-29 131.0 88 69.3
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 7.5e-29 130.6 82 75.6
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 7.5e-29 130.6 71 84.5
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 7.5e-29 130.6 71 84.5
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 7.5e-29 130.6 84 71.4
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 7.5e-29 130.6 98 64.3
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 9.8e-29 130.2 74 79.7
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 1.3e-28 129.8 73 78.1
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 1.3e-28 129.8 74 78.4
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 1.7e-28 129.4 73 82.2
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 1.7e-28 129.4 73 82.2
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 1.7e-28 129.4 74 78.4
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 2.2e-28 129.0 80 73.8
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 2.8e-28 128.6 89 70.8
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 6.3e-28 127.5 74 78.4
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 6.3e-28 127.5 72 80.6
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 1.1e-27 126.7 101 65.3
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 1.1e-27 126.7 84 69.0
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 1.4e-27 126.3 74 78.4
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 1.8e-27 125.9 73 78.1
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 3.1e-27 125.2 73 75.3
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 3.1e-27 125.2 73 78.1
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 3.1e-27 125.2 78 76.9
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 4.1e-27 124.8 73 76.7
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 4.1e-27 124.8 92 62.0
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 5.4e-27 124.4 73 78.1
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 5.4e-27 124.4 70 78.6
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 7.0e-27 124.0 73 76.7
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 9.1e-27 123.6 85 67.1
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 9.1e-27 123.6 85 67.1
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.2e-26 123.2 91 67.0
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 2.7e-26 122.1 95 62.1
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 3.5e-26 121.7 78 74.4
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 3.5e-26 121.7 74 77.0
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 1.7e-25 119.4 87 63.2
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 3.8e-25 118.2 95 62.1
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 5.0e-25 117.9 72 75.0
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 3.3e-24 115.2 74 70.3
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 1.0e-22 110.2 112 53.6
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 1.5e-21 106.3 62 75.8
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 1.5e-21 106.3 96 50.0
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 2.0e-21 105.9 72 62.5
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 2.0e-21 105.9 72 63.9
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 5.7e-21 104.4 77 63.6
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 4.9e-20 101.3 62 74.2
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 2.4e-19 99.0 102 57.8
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 5.4e-19 97.8 56 76.8
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 2.7e-18 95.5 64 57.8
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 1.1e-16 90.1 70 48.6
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 1.5e-16 89.7 69 50.7
BNapus_Darmor_BZH_scaffold_38p01260 Brassica napus HOM05D004779 ORTHO05D005737 1.3e-12 76.6 44 79.5
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 3.2e-11 72.0 40 82.5
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 7.8e-10 67.4 38 73.7
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 2.3e-09 65.9 39 76.9
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 1.1e-08 63.5 35 80.0
Os07g0164200 Oryza sativa ssp. japonica HOM05D007267 ORTHO05D009053 9.5e-08 60.5 40 72.5
arahy.Tifrunner.gnm1.ann1.RKVJ8T Arachis hypogaea HOM05D007267 ORTHO05D009053 2.8e-07 58.9 35 77.1
Lsat_1_v5_gn_5_53160 Lactuca sativa HOM05D007267 ORTHO05D009053 1.1e-06 57.0 38 68.4
Lsat_1_v5_gn_6_53880 Lactuca sativa HOM05D007267 ORTHO05D009053 3.1e-06 55.5 39 66.7
Gorai.006G118000 Gossypium raimondii HOM05D007267 ORTHO05D009053 8.9e-06 53.9 40 60.0


User provided reference genes

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