Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 2.5e-156 555.4 289 100.0
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 5.4e-151 537.7 289 95.5
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 6.0e-150 534.3 289 95.5
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 7.3e-148 527.3 289 92.7
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 1.4e-146 523.1 289 93.1
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 5.8e-145 517.7 289 93.1
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 5.8e-145 517.7 289 93.1
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 5.8e-145 517.7 289 93.1
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 4.9e-144 514.6 289 91.7
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 2.4e-143 512.3 289 91.7
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 4.1e-143 511.5 289 92.0
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 1.4e-138 496.5 289 86.2
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 8.4e-128 460.7 290 81.7
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 2.4e-122 442.6 280 78.9
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 1.2e-121 440.3 280 78.6
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 8.4e-120 434.1 280 77.5
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 1.9e-119 433.0 280 77.9
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 9.3e-119 430.6 280 78.2
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 9.3e-119 430.6 279 76.0
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 9.3e-119 430.6 280 75.7
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 1.2e-118 430.3 280 76.1
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 2.3e-117 426.0 280 75.4
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 3.9e-117 425.2 280 73.9
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 8.7e-117 424.1 279 74.6
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 1.5e-116 423.3 283 76.3
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 7.3e-116 421.0 279 73.8
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 1.6e-115 419.9 280 73.9
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 1.6e-115 419.9 279 73.8
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 2.1e-115 419.5 280 73.6
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 2.1e-115 419.5 280 73.9
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 2.8e-115 419.1 280 74.3
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 3.6e-115 418.7 280 73.9
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 6.2e-115 417.9 280 75.7
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 6.2e-115 417.9 280 73.9
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 1.8e-114 416.4 279 72.8
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 1.8e-114 416.4 279 72.4
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 2.4e-114 416.0 280 72.9
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 4.0e-114 415.2 282 72.7
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 4.0e-114 415.2 282 72.7
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 5.3e-114 414.8 279 73.1
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 9.0e-114 414.1 280 74.3
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 2.6e-113 412.5 280 72.9
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 7.6e-113 411.0 280 72.9
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 9.9e-113 410.6 280 71.4
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 3.8e-112 408.7 279 71.7
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 3.8e-112 408.7 279 73.5
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 1.9e-111 406.4 279 71.3
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 3.2e-111 405.6 280 71.8
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 9.3e-111 404.1 279 71.0
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 2.1e-110 402.9 287 69.7
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 2.7e-110 402.5 283 71.4
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 4.6e-110 401.7 282 70.2
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 1.3e-109 400.2 280 70.4
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 2.3e-109 399.4 280 70.7
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 3.9e-109 398.7 279 69.9
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 8.7e-109 397.5 279 69.2
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 1.1e-108 397.1 279 68.8
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 1.9e-108 396.4 280 68.9
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 2.1e-107 392.9 290 69.7
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 2.1e-107 392.9 249 77.1
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 6.2e-107 391.3 280 68.2
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 1.1e-106 390.6 283 67.1
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 3.1e-106 389.0 279 70.3
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 2.6e-105 386.0 283 67.8
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 9.9e-105 384.0 283 67.5
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 9.9e-105 384.0 291 68.4
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 1.3e-104 383.6 280 68.2
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 3.8e-104 382.1 283 67.1
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 4.9e-104 381.7 282 67.7
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 6.4e-104 381.3 280 68.6
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 1.9e-103 379.8 284 66.2
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 5.5e-103 378.3 246 72.4
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 9.3e-103 377.5 282 66.3
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 9.3e-103 377.5 280 67.5
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 2.1e-102 376.3 200 96.5
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 1.3e-101 373.6 313 61.7
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 1.3e-101 373.6 282 66.3
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 3.0e-101 372.5 291 63.9
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 8.7e-101 370.9 264 69.7
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 1.5e-100 370.2 284 65.8
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 2.5e-100 369.4 280 66.4
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 7.4e-100 367.9 287 63.8
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 2.1e-99 366.3 282 63.8
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 4.5e-97 358.6 282 63.8
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 2.2e-96 356.3 283 62.9
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 4.9e-96 355.1 282 64.5
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 6.5e-96 354.8 340 56.5
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 2.5e-95 352.8 271 65.3
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 2.7e-94 349.4 236 72.5
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 7.9e-94 347.8 236 74.2
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 1.0e-93 347.4 249 67.9
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 1.0e-93 347.4 239 70.7
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 2.3e-93 346.3 282 60.3
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 8.7e-93 344.4 282 59.9
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 1.8e-90 336.7 292 61.3
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 7.7e-89 331.3 321 54.2
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 3.9e-85 318.9 222 71.6
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 6.7e-85 318.2 282 56.4
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 3.7e-83 312.4 282 54.6
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 5.3e-82 308.5 287 52.6
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 1.3e-80 303.9 196 74.0
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 2.9e-80 302.8 280 58.2
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 2.6e-68 263.1 222 61.3
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 3.3e-68 262.7 284 54.2
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 4.1e-58 229.2 274 46.0
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 4.5e-57 225.7 143 76.2
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 8.8e-53 211.5 155 65.8
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 1.7e-51 207.2 323 39.6
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 5.5e-47 192.2 181 53.6
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 4.3e-39 166.0 185 50.8
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 9.5e-39 164.9 332 35.5
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 1.6e-38 164.1 125 60.8
Psat6g218400 Pisum sativum HOM05D006393 ORTHO05D008088 9.8e-36 154.8 116 67.2
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 6.4e-35 152.1 167 50.9
Glyma.05G012000 Glycine max HOM05D006393 ORTHO05D008088 7.8e-33 145.2 116 65.5
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.2e-25 121.3 183 41.0
Psat5g214680 Pisum sativum HOM05D006393 ORTHO05D008088 1.6e-25 120.9 95 61.1
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 4.6e-25 119.4 161 44.1
Eucgr.E03680 Eucalyptus grandis HOM05D006393 ORTHO05D008088 1.1e-23 114.8 84 65.5
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 7.6e-12 75.5 147 39.5
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 7.8e-09 65.5 58 55.2
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 3.9e-08 63.2 58 53.4
TAR636G3545 Trochodendron aralioides HOM05D006393 ORTHO05D008088 4.8e-06 56.2 44 61.4


User provided reference genes

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