Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 8.6e-260 899.8 462 100.0
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 3.3e-243 844.7 464 92.5
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 1.9e-238 828.9 462 92.0
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 3.3e-227 791.6 462 87.2
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 1.0e-220 770.0 467 85.2
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 7.4e-219 763.8 469 84.6
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 2.9e-215 751.9 466 84.3
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 3.1e-209 731.9 470 81.1
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 3.1e-209 731.9 470 81.1
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 5.3e-209 731.1 470 81.3
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 5.3e-209 731.1 470 81.3
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 2.0e-208 729.2 470 81.1
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 1.1e-198 696.8 467 75.4
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 2.5e-182 642.5 466 71.7
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 1.1e-169 600.5 423 70.7
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 1.4e-169 600.1 431 70.1
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 5.4e-169 598.2 420 70.0
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 2.0e-168 596.3 416 71.9
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 1.9e-166 589.7 407 71.5
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 2.5e-166 589.3 411 70.8
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 3.3e-166 589.0 448 67.0
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 4.3e-166 588.6 427 69.6
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 4.3e-166 588.6 448 67.0
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 4.3e-166 588.6 448 66.5
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 7.3e-166 587.8 427 68.9
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 7.3e-166 587.8 424 69.6
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 1.6e-165 586.6 427 69.3
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 1.6e-165 586.6 422 69.7
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.1e-165 586.3 420 69.5
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.1e-165 586.3 420 69.5
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 2.1e-165 586.3 409 71.4
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 2.8e-165 585.9 403 71.7
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 3.6e-165 585.5 396 73.0
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 8.0e-165 584.3 411 70.3
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 1.8e-164 583.2 410 70.5
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 2.3e-164 582.8 403 71.0
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 3.0e-164 582.4 400 72.5
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 5.2e-164 581.6 422 68.7
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 8.9e-164 580.9 412 70.6
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 1.2e-163 580.5 420 70.2
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 1.2e-163 580.5 422 68.7
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 1.5e-163 580.1 448 65.4
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 1.5e-163 580.1 412 69.2
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 2.0e-163 579.7 465 64.9
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 2.0e-163 579.7 411 70.6
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 3.4e-163 578.9 386 73.6
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 3.4e-163 578.9 389 72.5
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 5.7e-163 578.2 386 73.6
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 5.7e-163 578.2 449 65.9
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 9.8e-163 577.4 399 70.7
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 2.2e-162 576.2 386 73.3
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 8.3e-162 574.3 386 73.1
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 1.1e-161 573.9 410 68.8
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 1.8e-161 573.2 419 67.5
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 2.4e-161 572.8 394 72.8
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 4.1e-161 572.0 453 65.1
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 4.1e-161 572.0 399 71.2
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 4.1e-161 572.0 473 62.8
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 5.4e-161 571.6 408 69.1
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 7.0e-161 571.2 381 74.3
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 9.2e-161 570.9 391 72.4
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 1.2e-160 570.5 410 70.2
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 1.2e-160 570.5 430 67.7
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 2.0e-160 569.7 411 70.6
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 5.9e-160 568.2 446 65.5
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 5.9e-160 568.2 450 63.8
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 2.3e-159 566.2 375 73.9
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 3.9e-159 565.5 377 72.1
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 3.9e-159 565.5 428 68.5
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 3.9e-159 565.5 423 66.9
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 8.6e-159 564.3 428 68.5
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 4.3e-158 562.0 396 69.2
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 5.6e-158 561.6 416 67.3
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 7.3e-158 561.2 419 66.6
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 1.4e-156 557.0 401 70.3
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 3.1e-156 555.8 421 66.5
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 4.0e-156 555.4 439 63.1
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 5.2e-156 555.1 377 71.6
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 1.5e-155 553.5 380 70.3
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.5e-155 553.5 428 67.8
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 2.6e-155 552.7 428 67.5
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 5.8e-155 551.6 394 69.8
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 9.8e-155 550.8 389 70.4
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 8.3e-154 547.7 426 64.6
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 1.4e-153 547.0 420 65.2
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 9.2e-153 544.3 400 67.2
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 1.2e-152 543.9 387 70.0
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 1.7e-151 540.0 398 66.6
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 1.7e-151 540.0 406 66.3
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 6.6e-151 538.1 387 69.8
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 1.5e-150 537.0 422 66.6
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 2.8e-149 532.7 409 65.3
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 3.6e-149 532.3 387 68.5
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 5.8e-147 525.0 446 62.8
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 1.9e-145 520.0 379 67.3
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 6.2e-141 505.0 388 65.2
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 1.7e-138 496.9 410 64.1
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 6.4e-138 495.0 395 63.0
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 3.0e-135 486.1 392 62.0
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 3.8e-130 469.2 361 68.4
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 7.1e-129 464.9 313 72.2
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 7.8e-128 461.5 343 66.5
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 1.7e-127 460.3 399 56.6
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 1.7e-106 390.6 411 52.3
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 1.3e-103 380.9 384 52.3
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 2.5e-102 376.7 381 51.4
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 1.1e-100 371.3 246 72.8
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 5.9e-99 365.5 364 51.6
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 5.0e-98 362.5 397 47.1
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 7.9e-96 355.1 401 49.1
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.3e-95 354.4 383 47.5
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 8.5e-82 308.5 322 47.8
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 1.8e-76 290.8 387 44.4
Rhsim01G0096400 Rhododendron simsii HOM05D005548 ORTHO05D007497 2.8e-69 266.9 339 41.9
AUR62021498 Chenopodium quinoa HOM05D005548 ORTHO05D007497 1.2e-48 198.4 137 68.6
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 5.2e-39 166.4 249 41.4
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 6.8e-39 166.0 113 71.7
Oeu048670.1 Olea europaea HOM05D005548 ORTHO05D007497 2.5e-33 147.5 101 64.4
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.6e-27 128.3 90 70.0
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 4.6e-27 126.7 90 70.0
SEGI_35049 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 3.0e-26 124.0 258 34.1
SEGI_23308 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.2e-24 118.6 315 30.5
Ah.12g056490 Amaranthus hybridus HOM05D005548 ORTHO05D007497 1.2e-22 112.1 83 68.7
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.2e-22 112.1 72 75.0
Dinv06981 Davidia involucrata HOM05D005548 ORTHO05D045157 2.6e-22 110.9 81 66.7
MCO02G293 Micromonas commoda HOM05D005548 ORTHO05D007497 2.1e-19 101.3 355 27.6
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 8.7e-18 95.9 134 47.0
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.6e-16 91.7 97 51.5
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 6.4e-13 79.7 72 58.3
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 4.6e-11 73.6 88 45.5
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 7.8e-11 72.8 53 64.2


User provided reference genes

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