Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 0.0e+00 1390.6 700 100.0
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 0.0e+00 1348.6 700 96.0
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 0.0e+00 1318.9 701 94.4
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 0.0e+00 1283.9 698 91.4
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 0.0e+00 1266.9 700 90.1
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 0.0e+00 1242.3 700 88.9
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 0.0e+00 1242.3 701 88.3
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 0.0e+00 1239.9 701 88.9
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 0.0e+00 1239.6 701 88.7
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 0.0e+00 1234.6 700 88.4
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 0.0e+00 1230.7 697 88.8
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 0.0e+00 1169.1 701 83.9
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 7.4e-255 884.0 477 90.8
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 9.7e-247 857.1 693 68.7
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.2e-244 850.1 694 65.7
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 1.6e-241 839.7 712 62.1
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 1.8e-240 836.3 723 61.5
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 8.8e-240 833.9 719 61.2
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 2.6e-239 832.4 719 60.6
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 6.3e-238 827.8 719 60.9
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 2.0e-236 822.8 711 61.5
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 1.7e-235 819.7 716 60.8
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 8.5e-235 817.4 706 61.0
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 1.2e-233 813.5 702 61.4
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 3.6e-233 812.0 717 59.7
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 1.0e-232 810.4 717 60.3
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 1.8e-232 809.7 706 60.8
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 5.2e-232 808.1 717 60.1
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 5.2e-232 808.1 699 60.4
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 9.8e-231 803.9 707 59.8
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 1.7e-230 803.1 708 60.7
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 7.0e-229 797.7 711 58.5
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 2.0e-228 796.2 710 58.0
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 2.0e-228 796.2 706 57.9
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 3.5e-228 795.4 703 60.7
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 4.5e-228 795.0 721 58.5
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 1.7e-227 793.1 691 61.1
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 2.2e-227 792.7 716 57.7
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 5.0e-227 791.6 741 56.8
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 1.1e-226 790.4 699 58.9
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 1.5e-226 790.0 686 59.5
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 1.6e-225 786.6 709 58.0
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 6.1e-225 784.6 700 58.0
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 8.0e-225 784.3 742 58.0
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 2.3e-224 782.7 695 59.3
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 2.3e-224 782.7 710 58.5
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 3.0e-224 782.3 698 58.7
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 4.0e-224 781.9 711 58.1
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 4.0e-224 781.9 714 56.7
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 5.2e-224 781.6 709 57.3
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.0e-223 779.6 743 56.1
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 9.8e-223 777.3 711 57.5
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 1.7e-222 776.5 700 59.6
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 2.8e-222 775.8 701 57.2
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 2.8e-222 775.8 703 57.9
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 4.5e-220 768.5 700 56.7
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.0e-219 767.3 743 55.3
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 2.9e-219 765.8 711 58.2
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.5e-218 763.5 756 54.9
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 1.5e-218 763.5 697 58.4
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 5.6e-218 761.5 690 59.1
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 1.2e-217 760.4 689 56.3
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.2e-217 760.4 750 54.5
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 1.4e-216 756.9 688 58.3
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 6.8e-216 754.6 700 57.1
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 8.9e-216 754.2 706 56.7
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.2e-215 753.8 720 55.6
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 1.1e-213 747.3 652 59.2
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 5.4e-213 745.0 689 57.9
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 3.5e-212 742.3 708 55.4
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 1.7e-211 740.0 704 55.8
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 6.6e-211 738.0 706 55.9
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 1.1e-210 737.3 701 57.2
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.9e-210 736.5 681 56.4
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 3.3e-210 735.7 654 59.9
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 4.3e-210 735.3 697 57.2
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 2.1e-209 733.0 722 55.0
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 1.0e-208 730.7 674 57.0
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 2.6e-207 726.1 710 55.2
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 1.3e-206 723.8 712 54.4
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 6.4e-206 721.5 700 55.7
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 1.7e-203 713.4 724 53.6
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 2.3e-203 713.0 666 56.8
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 6.6e-203 711.4 680 55.9
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 6.6e-203 711.4 701 55.1
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 1.5e-202 710.3 684 54.8
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 9.5e-202 707.6 715 53.6
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 2.8e-201 706.1 611 59.2
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 1.1e-200 704.1 643 55.5
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.1e-197 694.1 692 55.1
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 1.2e-196 690.6 598 61.2
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 1.6e-193 680.2 699 53.9
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 1.8e-192 676.8 602 57.6
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 3.1e-192 676.0 665 54.9
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 5.4e-189 665.2 692 53.0
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 3.5e-188 662.5 730 50.5
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 7.8e-188 661.4 594 57.6
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 2.3e-187 659.8 700 51.6
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 7.3e-186 654.8 709 52.6
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 1.8e-184 650.2 767 48.9
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.2e-182 643.3 640 55.8
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 1.1e-173 614.4 701 49.5
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 1.1e-173 614.4 707 47.8
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 7.1e-173 611.7 597 57.0
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 3.9e-171 605.9 514 60.1
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 3.9e-171 605.9 695 50.6
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 9.3e-157 558.1 609 49.1
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 1.2e-143 514.6 634 48.3
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 7.7e-143 511.9 416 63.7
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 8.5e-142 508.4 530 54.2
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 4.8e-129 466.1 426 55.9
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 6.1e-116 422.5 750 39.1
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 4.7e-108 396.4 769 35.0
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 4.3e-101 373.2 711 35.3
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 3.6e-100 370.2 290 67.6
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 2.7e-87 327.4 469 40.9
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.5e-77 295.0 328 47.9
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 7.3e-77 292.7 330 47.9
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 5.3e-59 233.4 234 51.3
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 4.5e-58 230.3 287 48.4
A02p05250 Brassica napus HOM05D005666 ORTHO05D007183 1.0e-54 219.2 306 45.1
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 3.8e-49 200.7 263 46.4
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 1.4e-43 182.2 460 30.7
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 6.9e-43 179.9 251 40.6
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 7.6e-42 176.4 156 60.9
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 6.9e-35 153.3 708 26.6
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 1.7e-33 148.7 156 50.6
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 8.2e-28 129.8 124 57.3
BolC2t06938H Brassica oleracea HOM05D005666 ORTHO05D043081 4.4e-21 107.5 183 43.7
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 1.4e-19 102.4 91 60.4
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 2.2e-17 95.1 62 77.4
FvH4_6g51172 Fragaria vesca HOM05D005666 ORTHO05D007183 5.9e-10 70.5 61 63.9
SEGI_03684 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 1.3e-09 69.3 90 46.7
Thecc.05G064500 Theobroma cacao HOM05D005666 ORTHO05D007183 3.0e-06 58.2 103 37.9


User provided reference genes

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