Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 6.0e-70 267.7 167 100.0
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 8.1e-67 257.3 169 95.3
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 3.1e-66 255.4 167 94.0
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 6.4e-64 247.7 167 90.4
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 5.4e-63 244.6 166 91.0
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 5.1e-61 238.0 167 90.4
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 5.1e-61 238.0 167 90.4
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 1.3e-59 233.4 160 92.5
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 8.1e-59 230.7 160 90.6
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 1.6e-54 216.5 166 85.5
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 4.0e-50 201.8 168 82.1
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 1.7e-48 196.4 171 78.9
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 1.7e-48 196.4 170 80.0
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 7.1e-47 191.0 173 79.2
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 9.7e-44 180.6 184 60.9
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 6.1e-38 161.4 158 65.2
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 1.4e-37 160.2 167 70.1
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 8.8e-37 157.5 162 68.5
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 1.5e-36 156.8 160 64.4
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 4.3e-36 155.2 112 71.4
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 5.7e-36 154.8 161 65.2
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 7.4e-36 154.5 119 70.6
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 2.2e-35 152.9 160 71.9
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 2.8e-35 152.5 109 76.1
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 2.8e-35 152.5 159 63.5
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 3.7e-35 152.1 160 68.1
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 8.2e-35 151.0 163 68.7
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 2.4e-34 149.4 160 61.9
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 3.1e-34 149.1 163 64.4
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 3.1e-34 149.1 161 64.0
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 5.3e-34 148.3 125 70.4
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 9.1e-34 147.5 110 71.8
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 9.1e-34 147.5 122 67.2
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 1.2e-33 147.1 158 65.2
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 1.2e-33 147.1 118 69.5
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 1.5e-33 146.7 158 66.5
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 2.0e-33 146.4 160 63.1
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.6e-33 146.0 162 71.0
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 3.4e-33 145.6 162 71.6
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 7.7e-33 144.4 108 72.2
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 7.7e-33 144.4 118 66.9
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.0e-32 144.1 160 65.0
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.3e-32 143.7 160 64.4
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 1.7e-32 143.3 119 65.5
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 1.7e-32 143.3 162 60.5
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 2.2e-32 142.9 112 69.6
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 2.2e-32 142.9 101 73.3
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 2.2e-32 142.9 113 69.0
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 2.9e-32 142.5 117 68.4
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 2.9e-32 142.5 117 68.4
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 3.8e-32 142.1 107 72.0
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 3.8e-32 142.1 105 72.4
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 3.8e-32 142.1 163 64.4
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 5.0e-32 141.7 108 67.6
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 6.5e-32 141.4 110 70.9
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 6.5e-32 141.4 110 71.8
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 6.5e-32 141.4 104 74.0
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 8.5e-32 141.0 101 75.2
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 1.1e-31 140.6 124 66.1
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 1.9e-31 139.8 121 64.5
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 2.5e-31 139.4 109 71.6
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 2.5e-31 139.4 118 66.1
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 7.2e-31 137.9 111 66.7
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 9.4e-31 137.5 101 71.3
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 1.2e-30 137.1 171 62.6
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 4.7e-30 135.2 118 68.6
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 6.1e-30 134.8 108 71.3
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 6.1e-30 134.8 113 65.5
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 7.9e-30 134.4 106 72.6
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 1.4e-29 133.7 108 64.8
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 1.4e-29 133.7 101 72.3
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 1.8e-29 133.3 103 72.8
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 2.3e-29 132.9 109 70.6
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 2.3e-29 132.9 101 73.3
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 3.0e-29 132.5 116 63.8
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 3.9e-29 132.1 119 64.7
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 3.9e-29 132.1 119 64.7
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 3.9e-29 132.1 119 64.7
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 3.9e-29 132.1 119 64.7
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 5.1e-29 131.7 105 68.6
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 6.7e-29 131.3 101 73.3
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.5e-28 130.2 119 63.9
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 4.4e-28 128.6 162 60.5
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 7.4e-28 127.9 120 60.8
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 9.7e-28 127.5 112 62.5
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 9.7e-28 127.5 117 61.5
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 1.7e-27 126.7 112 62.5
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 2.8e-27 125.9 105 65.7
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 4.8e-27 125.2 119 60.5
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 1.8e-26 123.2 109 62.4
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 3.1e-26 122.5 120 59.2
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 6.9e-26 121.3 101 64.4
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 9.1e-26 120.9 109 62.4
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.0e-25 119.8 84 79.8
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 4.5e-25 118.6 102 69.6
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 5.9e-25 118.2 82 76.8
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 1.3e-24 117.1 79 77.2
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 1.3e-24 117.1 106 60.4
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 1.7e-24 116.7 218 50.5
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 3.8e-24 115.5 212 50.0
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 3.8e-24 115.5 79 78.5
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 1.1e-23 114.0 122 55.7
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 2.5e-23 112.8 84 67.9
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 7.2e-23 111.3 110 58.2
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 2.1e-22 109.8 114 51.8
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 1.4e-21 107.1 121 52.9
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 5.2e-21 105.1 122 52.5
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 2.2e-19 99.8 91 59.3
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 6.3e-19 98.2 83 66.3
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 8.2e-19 97.8 173 56.6
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 8.2e-19 97.8 87 60.9
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 7.0e-18 94.7 118 50.8
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 5.5e-15 85.1 78 66.7
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 1.2e-14 84.0 88 55.7
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 1.4e-13 80.5 53 73.6
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 5.2e-13 78.6 107 51.4
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 2.0e-12 76.6 86 50.0
Nitab4.5_0000784g0080 Nicotiana tabacum HOM05D006881 ORTHO05D008423 3.2e-07 59.3 118 39.0


User provided reference genes

Program Settings