Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 0.0e+00 2542.7 1287 100.0
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 0.0e+00 2516.1 1287 99.1
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 0.0e+00 2506.5 1287 98.7
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 0.0e+00 2485.7 1287 98.0
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 0.0e+00 2476.4 1288 97.6
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 0.0e+00 2468.7 1292 96.8
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 0.0e+00 2459.5 1295 96.5
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 0.0e+00 2445.2 1287 96.8
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 2412.1 1290 95.3
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 2407.5 1293 95.1
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 0.0e+00 2377.1 1293 94.1
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 0.0e+00 2364.3 1287 92.6
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2231.4 1288 86.3
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 0.0e+00 2229.9 1288 86.1
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2226.8 1288 85.9
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 0.0e+00 2220.3 1289 86.0
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 0.0e+00 2194.1 1288 84.9
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 0.0e+00 2189.8 1289 84.8
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 0.0e+00 2189.5 1299 83.6
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 0.0e+00 2187.1 1288 84.1
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 0.0e+00 2185.2 1289 84.5
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 0.0e+00 2179.1 1290 84.5
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2178.7 1289 84.2
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 0.0e+00 2176.7 1289 83.8
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 0.0e+00 2172.9 1288 84.2
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 0.0e+00 2172.9 1288 84.4
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 0.0e+00 2171.7 1287 84.0
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 0.0e+00 2170.2 1290 83.7
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 0.0e+00 2169.0 1290 87.0
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 0.0e+00 2165.2 1288 83.5
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2156.7 1287 83.5
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 2156.7 1286 83.6
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 0.0e+00 2156.3 1287 83.4
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 2154.8 1320 82.3
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2154.8 1287 83.4
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2154.0 1288 83.5
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 0.0e+00 2153.3 1289 83.7
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2152.1 1287 83.3
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2149.8 1298 82.7
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 0.0e+00 2149.8 1288 83.5
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 0.0e+00 2146.3 1286 82.9
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2144.4 1289 83.2
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 0.0e+00 2144.4 1289 83.2
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 0.0e+00 2140.2 1286 82.9
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 0.0e+00 2131.3 1292 83.4
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 2130.9 1294 82.5
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2128.2 1305 81.9
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2124.0 1305 81.7
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 0.0e+00 2107.0 1298 81.1
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 0.0e+00 2107.0 1296 81.1
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 0.0e+00 2104.3 1289 81.6
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 0.0e+00 2104.3 1289 82.0
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 0.0e+00 2101.2 1287 81.2
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 2100.1 1288 82.1
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 0.0e+00 2097.4 1290 81.2
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 0.0e+00 2094.7 1288 80.7
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 2090.8 1289 81.2
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 0.0e+00 2086.6 1311 80.7
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 0.0e+00 2086.6 1290 81.0
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 0.0e+00 2080.8 1289 80.7
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2073.1 1289 79.7
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 0.0e+00 2070.4 1290 79.2
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 0.0e+00 2070.4 1289 79.4
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 2070.0 1288 80.2
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 2057.0 1288 79.7
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2054.6 1289 79.3
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 2044.6 1288 79.3
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2044.2 1287 80.0
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 2044.2 1290 79.7
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 0.0e+00 2035.0 1309 79.4
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 0.0e+00 1965.3 1218 79.8
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 1961.0 1417 72.1
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 1923.3 1553 66.8
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 0.0e+00 1912.9 1295 73.7
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 0.0e+00 1911.0 1223 78.1
Cc10_g10590 Coffea canephora HOM05D002281 ORTHO05D005599 0.0e+00 1892.5 1174 80.4
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 0.0e+00 1877.8 1292 72.1
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 0.0e+00 1741.5 1316 69.6
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 0.0e+00 1649.4 960 86.1
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 0.0e+00 1635.2 955 85.9
RcHm_v2.0_Chr3g0448901 Rosa chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1572.0 934 82.2
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 0.0e+00 1563.5 1069 75.4
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1510.4 1329 57.6
HPP92_013019 Vanilla planifolia HOM05D002281 ORTHO05D005599 0.0e+00 1510.4 1205 64.1
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 0.0e+00 1506.5 1298 58.9
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 0.0e+00 1494.6 1294 58.8
Lalb_Chr18g0044201 Lupinus albus HOM05D002281 ORTHO05D005599 0.0e+00 1491.5 909 80.4
MELO3C015463.2 Cucumis melo HOM05D002281 ORTHO05D005599 0.0e+00 1490.3 936 78.3
Actinidia03823 Actinidia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1489.6 907 80.4
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 0.0e+00 1464.1 1294 57.9
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 0.0e+00 1442.6 1185 64.6
CsaV3_1G040360 Cucumis sativus L. HOM05D002281 ORTHO05D005599 0.0e+00 1439.9 911 77.9
ClCG03G011410 Citrullus lanatus HOM05D002281 ORTHO05D005599 0.0e+00 1439.5 910 77.6
MD12G1252900 Malus domestica HOM05D002281 ORTHO05D005599 0.0e+00 1407.1 847 81.9
Peaxi162Scf00285g00226 Petunia axillaris HOM05D002281 ORTHO05D005599 0.0e+00 1382.5 909 75.2
DCAR_005524 Daucus carota HOM05D002281 ORTHO05D005599 0.0e+00 1328.5 952 70.7
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1321.2 1312 52.2
ATR0787G096 Amborella trichopoda HOM05D002281 ORTHO05D005599 0.0e+00 1286.2 920 68.8
Hma1.2p1_0153F.1_g067920 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 1117.4 687 81.2
Ah.06g188740 Amaranthus hybridus HOM05D002281 ORTHO05D005599 1.4e-246 857.4 824 56.2
CAN.G61.7 Capsicum annuum HOM05D002281 ORTHO05D005599 2.8e-244 849.7 803 57.5
Lj2A49T37 Lonicera japonica HOM05D002281 ORTHO05D005599 7.5e-237 825.1 480 87.1
AUR62006997 Chenopodium quinoa HOM05D002281 ORTHO05D005599 1.2e-213 748.0 499 78.4
MD12G1252700 Malus domestica HOM05D002281 ORTHO05D005599 2.9e-204 716.8 455 81.3
SHI14430 Sapria himalayana HOM05D002281 ORTHO05D005599 5.3e-198 696.0 553 65.6
Actinidia03824 Actinidia chinensis HOM05D002281 ORTHO05D005599 1.5e-176 624.8 349 91.7
SEGI_41506 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 5.9e-173 612.8 420 71.9
RcHm_v2.0_Chr3g0448911 Rosa chinensis HOM05D002281 ORTHO05D005599 1.1e-171 608.6 349 89.4
CAN.G61.6 Capsicum annuum HOM05D002281 ORTHO05D005599 3.9e-169 600.1 348 89.1
Lalb_Chr18g0044191 Lupinus albus HOM05D002281 ORTHO05D005599 3.9e-169 600.1 348 88.5
ATR0787G220 Amborella trichopoda HOM05D002281 ORTHO05D005599 5.3e-166 589.7 349 86.5
CDE01G0796 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 9.4e-163 578.9 451 65.2
ClCG03G011400 Citrullus lanatus HOM05D002281 ORTHO05D005599 2.8e-159 567.4 351 83.8
CsaV3_1G040370 Cucumis sativus L. HOM05D002281 ORTHO05D005599 4.2e-155 553.5 351 82.3
CDE01G0576 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 2.2e-151 541.2 381 70.3
CBR_g23328 Chara braunii HOM05D002281 ORTHO05D005599 1.1e-150 538.9 639 45.1
Psat0s2603g0080 Pisum sativum HOM05D002281 ORTHO05D005599 3.7e-143 513.8 333 75.7
vmacro19963 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 9.1e-142 509.2 395 70.6
Peaxi162Scf00285g00225 Petunia axillaris HOM05D002281 ORTHO05D005599 2.7e-138 497.7 275 91.6
Cpa.g.sc51.41 Carica papaya HOM05D002281 ORTHO05D005599 1.0e-137 495.7 299 79.3
DCAR_005525 Daucus carota HOM05D002281 ORTHO05D005599 1.5e-128 465.3 259 90.3
HPP92_013016 Vanilla planifolia HOM05D002281 ORTHO05D005599 2.3e-121 441.4 302 70.2
Haze_04492 Corylus avellana HOM05D002281 ORTHO05D005599 1.0e-116 426.0 276 81.5
CAN.G61.8 Capsicum annuum HOM05D002281 ORTHO05D005599 2.1e-114 418.3 408 56.1
Lj2A49G34 Lonicera japonica HOM05D002281 ORTHO05D005599 1.3e-111 409.1 243 82.7
HPP92_013015 Vanilla planifolia HOM05D002281 ORTHO05D005599 8.3e-111 406.4 348 62.9
arahy.Tifrunner.gnm1.ann1.I7KFZB Arachis hypogaea HOM05D002281 ORTHO05D005599 1.6e-101 375.6 264 76.5
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 2.8e-98 364.8 260 74.6
SEGI_00068 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 1.0e-84 319.7 264 60.6
vmacro19965 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 3.8e-71 274.6 166 78.9
Hma1.2p1_0153F.1_g067900 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 1.2e-69 269.6 154 89.0
CBR_g23326 Chara braunii HOM05D002281 ORTHO05D005599 6.0e-69 267.3 464 34.7
Ah.06g188770 Amaranthus hybridus HOM05D002281 ORTHO05D005599 9.3e-62 243.4 134 91.0
vmacro19966 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 5.9e-56 224.2 425 36.5
Cc10_g10600 Coffea canephora HOM05D002281 ORTHO05D005599 1.9e-54 219.2 130 86.9
SHI14432 Sapria himalayana HOM05D002281 ORTHO05D005599 2.7e-53 215.3 142 72.5
Lj2A50T26 Lonicera japonica HOM05D002281 ORTHO05D005599 5.1e-52 211.1 131 78.6
Lj2A49T38 Lonicera japonica HOM05D002281 ORTHO05D005599 1.5e-48 199.5 119 78.2
Lj2A49G35 Lonicera japonica HOM05D002281 ORTHO05D005599 5.5e-46 191.0 127 73.2
BraA03t10210Z Brassica rapa HOM05D002281 ORTHO05D005599 7.4e-43 180.6 123 78.9
CDE02G3044 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 2.6e-40 172.2 127 66.9
CBR_g74560 Chara braunii HOM05D002281 ORTHO05D005599 3.5e-40 171.8 164 58.5
A03p08860 Brassica napus HOM05D002281 ORTHO05D005599 1.0e-36 160.2 123 70.7
Gorai.007G272700 Gossypium raimondii HOM05D002281 ORTHO05D005599 2.0e-35 156.0 98 76.5
SEGI_02952 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 2.0e-35 156.0 113 67.3
Gohir.D11G253675 Gossypium hirsutum HOM05D002281 ORTHO05D005599 1.3e-34 153.3 98 75.5
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 3.1e-33 148.7 128 64.1
SEGI_33538 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 3.0e-28 132.1 95 64.2
Gohir.D11G253550 Gossypium hirsutum HOM05D002281 ORTHO05D005599 1.7e-26 126.3 73 78.1
Gorai.007G272500 Gossypium raimondii HOM05D002281 ORTHO05D005599 1.7e-26 126.3 73 76.7
SEGI_28731 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 3.1e-25 122.1 85 67.1
Gohir.A11G244201 Gossypium hirsutum HOM05D002281 ORTHO05D005599 2.3e-23 115.9 72 70.8
SHI14427 Sapria himalayana HOM05D000030 ORTHO05D000009 8.6e-23 114.0 112 56.2
Nn6g32299 Nelumbo nucifera HOM05D002281 ORTHO05D005599 1.2e-21 110.2 73 71.2
arahy.Tifrunner.gnm1.ann1.57298L Arachis hypogaea HOM05D002281 ORTHO05D005599 1.0e-15 90.5 104 51.0
HPP92_013017 Vanilla planifolia HOM05D002281 ORTHO05D005599 6.1e-13 81.3 54 72.2
QL06p040095 Quercus lobata HOM05D002281 ORTHO05D005599 1.4e-09 70.1 77 51.9
Ah.06g188760 Amaranthus hybridus HOM05D002281 ORTHO05D006774 2.0e-08 66.2 142 34.5
vmacro19964 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 5.0e-07 61.6 31 83.9


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