Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G29260 Arabidopsis lyrata HOM05D004955 ORTHO05D005965 1.5e-311 1072.0 555 100.0
AT5G18070 Arabidopsis thaliana HOM05D004955 ORTHO05D005965 8.4e-294 1013.1 554 94.4
Carub.0006s1636 Capsella rubella HOM05D004955 ORTHO05D005965 4.3e-290 1000.7 556 93.0
Thhalv10013080m.g Eutrema salsugineum HOM05D004955 ORTHO05D005965 2.2e-278 961.8 559 90.7
Sp6g26230 Schrenkiella parvula HOM05D004955 ORTHO05D005965 2.7e-276 954.9 559 89.6
CARHR195050 Cardamine hirsuta HOM05D004955 ORTHO05D005965 3.5e-276 954.5 556 90.6
C09p58920 Brassica napus HOM05D004955 ORTHO05D005965 3.3e-266 921.4 555 85.6
BolC9t58736H Brassica oleracea HOM05D004955 ORTHO05D005965 2.9e-262 908.3 555 85.0
BraA10t44206Z Brassica rapa HOM05D004955 ORTHO05D005965 6.5e-262 907.1 555 84.5
BcaC04g18728 Brassica carinata HOM05D004955 ORTHO05D005965 1.1e-261 906.4 555 84.7
A10p21440 Brassica napus HOM05D004955 ORTHO05D005965 8.8e-259 896.7 556 83.6
Aa31LG9G15390 Aethionema arabicum HOM05D004955 ORTHO05D005965 6.9e-256 887.1 563 83.1
C03p10070 Brassica napus HOM05D004955 ORTHO05D005965 3.1e-248 861.7 554 80.1
BraA03t10187Z Brassica rapa HOM05D004955 ORTHO05D005965 3.5e-247 858.2 554 79.8
BcaB01g05173 Brassica carinata HOM05D004955 ORTHO05D005965 1.9e-245 852.4 555 79.8
BolC3t13493H Brassica oleracea HOM05D004955 ORTHO05D005965 1.9e-245 852.4 555 79.8
A03p08630 Brassica napus HOM05D004955 ORTHO05D005965 2.3e-243 845.5 554 79.1
THA.LOC104814429 Tarenaya hassleriana HOM05D004955 ORTHO05D005965 8.8e-243 843.6 556 77.7
BcaB08g36711 Brassica carinata HOM05D004955 ORTHO05D005965 2.0e-223 779.2 557 75.6
QL12p007112 Quercus lobata HOM05D004955 ORTHO05D005965 4.9e-217 758.1 562 70.3
COL.COLO4_17563 Corchorus olitorius HOM05D004955 ORTHO05D005965 4.6e-215 751.5 559 69.4
FvH4_5g21180 Fragaria vesca HOM05D004955 ORTHO05D005965 5.0e-214 748.0 559 68.7
RcHm_v2.0_Chr7g0208321 Rosa chinensis HOM05D004955 ORTHO05D005965 8.6e-214 747.3 559 68.5
Thecc.07G110200 Theobroma cacao HOM05D004955 ORTHO05D005965 1.9e-213 746.1 559 69.6
Ciclev10031124m.g Citrus clementina HOM05D004955 ORTHO05D005965 1.6e-212 743.0 557 68.4
Cpa.g.sc39.114 Carica papaya HOM05D004955 ORTHO05D005965 3.6e-212 741.9 559 69.1
Duzib213G0438 Durio zibethinus HOM05D004955 ORTHO05D005965 3.6e-212 741.9 559 68.7
Psat2g174720 Pisum sativum HOM05D004955 ORTHO05D005965 3.6e-212 741.9 560 70.5
Gohir.A01G044000 Gossypium hirsutum HOM05D004955 ORTHO05D005965 1.4e-211 740.0 561 68.3
Sabra01G0115600 Salix brachista HOM05D004955 ORTHO05D005965 1.4e-211 740.0 559 69.1
FAN18G2324 Fragaria x ananassa HOM05D004955 ORTHO05D005965 5.2e-211 738.0 578 66.4
Prupe.5G046300 Prunus persica HOM05D004955 ORTHO05D005965 5.2e-211 738.0 559 67.8
Potri.001G146900 Populus trichocarpa HOM05D004955 ORTHO05D005965 2.6e-210 735.7 559 68.3
MD06G1040100 Malus domestica HOM05D004955 ORTHO05D005965 4.4e-210 734.9 560 68.8
Gorai.002G043000 Gossypium raimondii HOM05D004955 ORTHO05D005965 7.5e-210 734.2 561 68.1
FAN08G3652 Fragaria x ananassa HOM05D004955 ORTHO05D005965 9.8e-210 733.8 556 68.2
TAR375G0042 Trochodendron aralioides HOM05D004955 ORTHO05D005965 9.8e-210 733.8 559 68.3
Ca_24631_v3 Cicer arietinum L. HOM05D004955 ORTHO05D005965 2.2e-209 732.6 558 68.5
Gohir.D01G034800 Gossypium hirsutum HOM05D004955 ORTHO05D005965 4.9e-209 731.5 561 67.7
CiPaw.12G060300 Carya illinoinensis HOM05D004955 ORTHO05D005965 6.4e-209 731.1 560 67.9
Nn1g00613 Nelumbo nucifera HOM05D004955 ORTHO05D005965 6.4e-209 731.1 558 67.9
GSVIVG01013229001 Vitis vinifera HOM05D004955 ORTHO05D005965 2.4e-208 729.2 559 67.1
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea HOM05D004955 ORTHO05D005965 3.2e-208 728.8 560 68.2
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea HOM05D004955 ORTHO05D005965 3.2e-208 728.8 560 68.2
Dinv28916 Davidia involucrata HOM05D004955 ORTHO05D005965 3.2e-208 728.8 561 68.3
VMungo1215G2917 Vigna mungo HOM05D004955 ORTHO05D005965 4.1e-208 728.4 559 68.2
Lj2g0012431 Lotus japonicus HOM05D004955 ORTHO05D005965 8.6e-206 720.7 559 67.6
GSVIVG01011242001 Vitis vinifera HOM05D004955 ORTHO05D005965 2.5e-205 719.2 559 66.7
FAN13G2236 Fragaria x ananassa HOM05D004955 ORTHO05D005965 3.3e-205 718.8 580 65.5
Eucgr.D02153 Eucalyptus grandis HOM05D004955 ORTHO05D005965 2.1e-204 716.1 558 67.6
CSS0027312 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 3.6e-204 715.3 559 67.3
CSS0030337 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 6.2e-204 714.5 559 67.1
FAN04G2254 Fragaria x ananassa HOM05D004955 ORTHO05D005965 6.2e-204 714.5 567 65.8
Glyma.20G095000 Glycine max HOM05D004955 ORTHO05D005965 6.2e-204 714.5 561 67.2
Medtr5g013970 Medicago truncatula HOM05D004955 ORTHO05D005965 8.1e-204 714.1 560 67.0
Nitab4.5_0002055g0140 Nicotiana tabacum HOM05D004955 ORTHO05D005965 8.1e-204 714.1 559 66.5
PSO017G5366 Papaver somniferum HOM05D004955 ORTHO05D005965 1.8e-203 713.0 555 66.1
PGR031G1993 Punica granatum HOM05D004955 ORTHO05D005965 1.8e-203 713.0 557 66.4
Phvul.002G003600 Phaseolus vulgaris HOM05D004955 ORTHO05D005965 3.1e-203 712.2 558 66.7
Sed0006321 Sechium edule HOM05D004955 ORTHO05D005965 3.1e-203 712.2 559 67.8
DCAR_005602 Daucus carota HOM05D004955 ORTHO05D005965 1.2e-202 710.3 559 66.7
CsaV3_1G038770 Cucumis sativus L. HOM05D004955 ORTHO05D005965 2.0e-202 709.5 560 67.1
Sopen08g025850 Solanum pennellii HOM05D004955 ORTHO05D005965 4.4e-202 708.4 559 66.2
MELO3C015301.2 Cucumis melo HOM05D004955 ORTHO05D005965 5.8e-202 708.0 552 67.9
PSO541G5086 Papaver somniferum HOM05D004955 ORTHO05D005965 5.8e-202 708.0 555 65.2
Rhsim09G0128800 Rhododendron simsii HOM05D004955 ORTHO05D005965 7.5e-202 707.6 561 66.7
Glyma.07G096600 Glycine max HOM05D004955 ORTHO05D005965 9.9e-202 707.2 562 66.5
Peaxi162Scf00084g00922 Petunia axillaris HOM05D004955 ORTHO05D005965 1.7e-201 706.4 586 63.7
Atru.BG.31.p Acer truncatum HOM05D004955 ORTHO05D005965 2.9e-201 705.7 543 68.0
vmacro21668 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 2.9e-201 705.7 561 67.2
PSO063G1154 Papaver somniferum HOM05D004955 ORTHO05D005965 3.7e-201 705.3 555 65.4
Sc07g0008830 Simmondsia chinensis HOM05D004955 ORTHO05D005965 8.3e-201 704.1 559 65.1
Aqoxy3G03106 Aquilegia oxysepala HOM05D004955 ORTHO05D005965 1.1e-200 703.7 587 63.0
Solyc08g077270.4 Solanum lycopersicum HOM05D004955 ORTHO05D005965 1.1e-200 703.7 559 65.8
Migut.E00798 Erythranthe guttata HOM05D004955 ORTHO05D005965 1.4e-200 703.4 556 66.4
Migut.E00912 Erythranthe guttata HOM05D004955 ORTHO05D005965 3.2e-200 702.2 556 66.2
Lj3A396G10 Lonicera japonica HOM05D004955 ORTHO05D005965 4.1e-200 701.8 560 65.4
CAN.G799.17 Capsicum annuum HOM05D004955 ORTHO05D005965 5.4e-200 701.4 559 65.5
TWI81G0724 Tripterygium wilfordii HOM05D004955 ORTHO05D005965 9.2e-200 700.7 560 64.6
Hund14430 Selenicereus undatus HOM05D004955 ORTHO05D005965 7.8e-199 697.6 571 64.4
CANSAT80G1132 Cannabis sativa HOM05D004955 ORTHO05D005965 1.3e-198 696.8 560 64.3
MD16G1269200 Malus domestica HOM05D004955 ORTHO05D005965 1.3e-198 696.8 568 65.8
Haze_07894 Corylus avellana HOM05D004955 ORTHO05D005965 5.1e-198 694.9 562 65.1
MBI04_g44837_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 1.1e-197 693.7 576 63.5
SalBow6G1446 Salvia bowleyana HOM05D004955 ORTHO05D005965 1.9e-197 693.0 559 63.7
ATR0829G014 Amborella trichopoda HOM05D004955 ORTHO05D005965 2.5e-197 692.6 563 63.8
MSTRG.1970 Avicennia marina HOM05D004955 ORTHO05D005965 3.3e-197 692.2 559 64.8
EL10Ac5g12196 Beta vulgaris HOM05D004955 ORTHO05D005965 3.1e-195 685.6 559 63.0
Lsat_1_v5_gn_6_66461 Lactuca sativa HOM05D004955 ORTHO05D005965 5.2e-195 684.9 558 64.7
Cc05_g03300 Coffea canephora HOM05D004955 ORTHO05D005965 5.8e-194 681.4 558 64.0
Oeu039341.2 Olea europaea HOM05D004955 ORTHO05D005965 1.3e-193 680.2 583 62.8
vmacro00352 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 3.8e-193 678.7 538 67.1
HanXRQChr14g0455871 Helianthus annuus HOM05D004955 ORTHO05D005965 9.2e-192 674.1 535 66.2
Nitab4.5_0006693g0050 Nicotiana tabacum HOM05D004955 ORTHO05D005965 9.2e-192 674.1 516 67.4
HPP92_017500 Vanilla planifolia HOM05D004955 ORTHO05D005965 1.3e-190 670.2 555 62.3
Manes.15G172800 Manihot esculenta HOM05D004955 ORTHO05D005965 2.3e-190 669.5 525 67.2
AUR62007230 Chenopodium quinoa HOM05D004955 ORTHO05D005965 8.7e-190 667.5 559 62.8
AUR62018770 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.1e-189 667.2 559 62.8
MBI04_g29834_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 1.2e-188 663.7 566 62.4
Lalb_Chr16g0379231 Lupinus albus HOM05D004955 ORTHO05D005965 1.2e-186 657.1 496 69.6
AUR62001104 Chenopodium quinoa HOM05D004955 ORTHO05D005965 2.6e-186 656.0 560 62.3
ClCG03G017340 Citrullus lanatus HOM05D004955 ORTHO05D005965 1.4e-184 650.2 560 63.4
SEGI_00537 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 1.0e-182 644.0 555 61.6
ECA233G2813 Erigeron canadensis HOM05D004955 ORTHO05D005965 1.1e-181 640.6 554 61.6
PGSC0003DMG400024224 Solanum tuberosum HOM05D004955 ORTHO05D005965 1.4e-179 633.6 496 66.3
Os07g0195400 Oryza sativa ssp. japonica HOM05D004955 ORTHO05D005965 4.0e-179 632.1 537 58.5
Actinidia25945 Actinidia chinensis HOM05D004955 ORTHO05D005965 3.4e-178 629.0 556 61.2
CSS0006893 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 6.4e-177 624.8 491 65.2
SGA_v2.0_scaffold18G08384 Striga asiatica HOM05D004955 ORTHO05D005965 2.4e-176 622.9 497 64.4
Zm00001eb119880 Zea mays HOM05D004955 ORTHO05D005965 3.5e-175 619.0 552 57.1
unitig_21.g20378 Utricularia gibba HOM05D004955 ORTHO05D005965 3.1e-163 579.3 547 58.0
Haze_08303 Corylus avellana HOM05D004955 ORTHO05D005965 3.0e-158 562.8 424 68.2
Pp3c15_140 Physcomitrium patens HOM05D004955 ORTHO05D005965 1.9e-152 543.5 572 52.4
CBR_g36832 Chara braunii HOM05D004955 ORTHO05D005965 2.7e-151 539.7 592 51.4
SHI01417 Sapria himalayana HOM05D004955 ORTHO05D005965 4.6e-151 538.9 444 64.0
Haze_08299 Corylus avellana HOM05D004955 ORTHO05D005965 2.8e-148 529.6 513 57.9
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis HOM05D004955 ORTHO05D005965 7.7e-146 521.5 569 50.4
Mapoly0074s0077 Marchantia polymorpha HOM05D004955 ORTHO05D005965 7.2e-144 515.0 569 50.3
SGA_v2.0_scaffold157G37418 Striga asiatica HOM05D004955 ORTHO05D005965 1.4e-139 500.7 465 58.1
CDE08G0647 Ceratophyllum demersum HOM05D004955 ORTHO05D005965 4.1e-139 499.2 403 63.0
SMO174G0171 Selaginella moellendorffii HOM05D004955 ORTHO05D005965 2.2e-137 493.4 546 50.4
Dinv25184 Davidia involucrata HOM05D004955 ORTHO05D005965 2.7e-135 486.5 398 65.3
Atru.chr6.1775 Acer truncatum HOM05D004955 ORTHO05D005965 5.9e-130 468.8 358 68.4
PRCOL_00000375 Prasinoderma coloniale HOM05D004955 ORTHO05D005965 7.0e-123 445.3 536 48.1
Haze_08304 Corylus avellana HOM05D004955 ORTHO05D005965 1.6e-114 417.5 411 55.7
MCO08G085 Micromonas commoda HOM05D004955 ORTHO05D005965 2.7e-106 390.2 588 40.6
Glyma.01G201400 Glycine max HOM05D004955 ORTHO05D005965 1.0e-105 388.3 293 69.3
Nn3g19414 Nelumbo nucifera HOM05D004955 ORTHO05D005965 1.2e-98 364.8 283 65.4
TPR.G6765 Trifolium pratense HOM05D004955 ORTHO05D005965 1.0e-97 361.7 569 41.8
Cre08.g379700 Chlamydomonas reinhardtii HOM05D004955 ORTHO05D005965 1.1e-94 351.7 542 41.0
Glyma.16G093333 Glycine max HOM05D004955 ORTHO05D005965 5.8e-69 266.2 202 67.3
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 1.0e-57 228.8 487 35.5
MD09G1284100 Malus domestica HOM05D004955 ORTHO05D005965 2.2e-52 211.1 369 39.8
BcaB01g01790 Brassica carinata HOM05D004955 ORTHO05D005965 1.1e-51 208.8 148 73.0
Haze_26496 Corylus avellana HOM05D004955 ORTHO05D005965 1.9e-51 208.0 280 45.0
BcaB01g06395 Brassica carinata HOM05D004955 ORTHO05D005965 6.7e-41 172.9 100 88.0
Glyma.16G093267 Glycine max HOM05D004955 ORTHO05D005965 7.4e-40 169.5 144 65.3
Glyma.01G201300 Glycine max HOM05D004955 ORTHO05D005965 2.2e-36 157.9 144 62.5
SEGI_27182 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 2.2e-36 157.9 286 37.8
Haze_08302 Corylus avellana HOM05D004955 ORTHO05D005965 1.0e-33 149.1 197 48.7
CARHR185470 Cardamine hirsuta HOM05D004955 ORTHO05D005965 2.5e-32 144.4 87 85.1
Cc05_g03290 Coffea canephora HOM05D004955 ORTHO05D005965 5.3e-30 136.7 111 63.1
SHI01420 Sapria himalayana HOM05D004955 ORTHO05D000023 1.2e-26 125.6 108 60.2
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 2.1e-26 124.8 182 41.8
vmacro21667 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 2.3e-25 121.3 105 61.0
Glyma.16G093100 Glycine max HOM05D004955 ORTHO05D005965 2.5e-19 101.3 79 63.3
ATR0149G020 Amborella trichopoda HOM05D004955 ORTHO05D005965 2.1e-18 98.2 88 58.0
Ah.04g153990 Amaranthus hybridus HOM05D004955 ORTHO05D005965 4.1e-14 84.0 205 30.2
Haze_08300 Corylus avellana HOM05D004955 ORTHO05D005965 7.0e-14 83.2 89 53.9
SEGI_05540 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 1.0e-12 79.3 74 54.1


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