Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G28600 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 1.0e-157 560.5 317 100.0
AT5G17510 Arabidopsis thaliana HOM05D004645 ORTHO05D005693 3.0e-154 548.9 319 97.2
Carub.0006s1574 Capsella rubella HOM05D004645 ORTHO05D005693 3.5e-147 525.4 323 93.2
BcaB08g36765 Brassica carinata HOM05D004645 ORTHO05D005693 3.9e-146 521.9 321 93.5
A10p21880 Brassica napus HOM05D004645 ORTHO05D005693 1.6e-144 516.5 322 92.2
BraA10t44247Z Brassica rapa HOM05D004645 ORTHO05D005693 1.6e-144 516.5 322 92.2
BolC9t58802H Brassica oleracea HOM05D004645 ORTHO05D005693 3.7e-144 515.4 318 93.7
BcaC04g18782 Brassica carinata HOM05D004645 ORTHO05D005693 6.3e-144 514.6 319 93.4
C09p59630 Brassica napus HOM05D004645 ORTHO05D005693 1.8e-143 513.1 318 93.4
Sp6g26710 Schrenkiella parvula HOM05D004645 ORTHO05D005693 2.0e-142 509.6 326 91.7
Aa31LG11G12160 Aethionema arabicum HOM05D004645 ORTHO05D005693 1.6e-139 500.0 324 89.2
THA.LOC104820831 Tarenaya hassleriana HOM05D004645 ORTHO05D005693 7.7e-134 481.1 325 83.4
Thhalv10013879m.g Eutrema salsugineum HOM05D004645 ORTHO05D005693 2.1e-131 473.0 320 88.4
CARHR195680 Cardamine hirsuta HOM05D004645 ORTHO05D005693 2.0e-126 456.4 321 86.6
THA.LOC104802906 Tarenaya hassleriana HOM05D004645 ORTHO05D005693 1.7e-120 436.8 327 74.6
Thecc.05G223300 Theobroma cacao HOM05D004645 ORTHO05D005693 1.2e-107 394.0 329 73.6
Duzib177G0889 Durio zibethinus HOM05D004645 ORTHO05D005693 2.6e-105 386.3 348 69.5
Gohir.D03G055700 Gossypium hirsutum HOM05D004645 ORTHO05D005693 5.7e-105 385.2 334 72.2
Gorai.003G058500 Gossypium raimondii HOM05D004645 ORTHO05D005693 1.3e-104 384.0 337 71.5
Gohir.A02G114700 Gossypium hirsutum HOM05D004645 ORTHO05D005693 6.3e-104 381.7 333 71.2
CSS0046309 Camellia sinensis var. sinensis HOM05D004645 ORTHO05D005693 8.3e-104 381.3 324 72.5
Manes.09G130100 Manihot esculenta HOM05D004645 ORTHO05D005693 2.0e-102 376.7 330 70.0
Ciclev10031859m.g Citrus clementina HOM05D004645 ORTHO05D005693 1.0e-101 374.4 325 70.8
Lj1g0014871 Lotus japonicus HOM05D004645 ORTHO05D005693 1.3e-101 374.0 324 71.3
Glyma.12G014000 Glycine max HOM05D004645 ORTHO05D005693 2.9e-101 372.9 326 69.3
VMungo1127G1262 Vigna mungo HOM05D004645 ORTHO05D005693 2.9e-101 372.9 333 69.4
CANSAT21G0324 Cannabis sativa HOM05D004645 ORTHO05D005693 6.6e-101 371.7 321 71.3
Dinv01810 Davidia involucrata HOM05D004645 ORTHO05D005693 8.6e-101 371.3 337 70.3
Actinidia33801 Actinidia chinensis HOM05D004645 ORTHO05D005693 1.1e-100 370.9 332 72.6
Gohir.A13G158000 Gossypium hirsutum HOM05D004645 ORTHO05D005693 1.9e-100 370.2 325 73.2
Glyma.09G223000 Glycine max HOM05D004645 ORTHO05D005693 3.3e-100 369.4 335 68.1
Manes.08G160200 Manihot esculenta HOM05D004645 ORTHO05D005693 3.3e-100 369.4 329 67.8
CSS0029852 Camellia sinensis var. sinensis HOM05D004645 ORTHO05D005693 5.6e-100 368.6 332 71.1
CiPaw.06G036400 Carya illinoinensis HOM05D004645 ORTHO05D005693 1.2e-99 367.5 326 69.9
CiPaw.05G212200 Carya illinoinensis HOM05D004645 ORTHO05D005693 1.6e-99 367.1 322 69.9
Thhalv10020936m.g Eutrema salsugineum HOM05D004645 ORTHO05D005693 2.1e-99 366.7 354 68.4
TWI60G0474 Tripterygium wilfordii HOM05D004645 ORTHO05D005693 4.7e-99 365.5 341 66.3
GSVIVG01024286001 Vitis vinifera HOM05D004645 ORTHO05D005693 4.7e-99 365.5 252 75.4
Phvul.011G016900 Phaseolus vulgaris HOM05D004645 ORTHO05D005693 8.0e-99 364.8 325 66.5
Hma1.2p1_0419F.1_g149550 Hydrangea macrophylla HOM05D004645 ORTHO05D005693 6.8e-98 361.7 355 66.2
MD01G1239600 Malus domestica HOM05D004645 ORTHO05D005693 8.9e-98 361.3 317 69.1
Duzib128G1942 Durio zibethinus HOM05D004645 ORTHO05D005693 1.2e-97 360.9 334 68.3
Atru.chr12.1851 Acer truncatum HOM05D004645 ORTHO05D005693 1.5e-97 360.5 326 70.2
Medtr0004s0240 Medicago truncatula HOM05D004645 ORTHO05D005693 1.5e-97 360.5 325 70.8
Gohir.D13G162500 Gossypium hirsutum HOM05D004645 ORTHO05D005693 2.6e-97 359.8 321 72.3
Hund09812 Selenicereus undatus HOM05D004645 ORTHO05D005693 3.7e-96 355.9 247 76.1
arahy.Tifrunner.gnm1.ann1.3IB4NC Arachis hypogaea HOM05D004645 ORTHO05D005693 8.3e-96 354.8 347 67.4
arahy.Tifrunner.gnm1.ann1.7F5N7U Arachis hypogaea HOM05D004645 ORTHO05D005693 8.3e-96 354.8 347 67.4
Nitab4.5_0009278g0030 Nicotiana tabacum HOM05D004645 ORTHO05D005693 1.1e-95 354.4 327 60.2
Potri.013G076800 Populus trichocarpa HOM05D004645 ORTHO05D005693 3.2e-95 352.8 334 62.6
Lj5g0009502 Lotus japonicus HOM05D004645 ORTHO05D005693 9.2e-95 351.3 321 70.7
Solyc03g097300.4 Solanum lycopersicum HOM05D004645 ORTHO05D005693 2.0e-94 350.1 329 62.9
Sopen03g028070 Solanum pennellii HOM05D004645 ORTHO05D005693 2.0e-94 350.1 329 62.9
TAR629G2315 Trochodendron aralioides HOM05D004645 ORTHO05D005693 2.7e-94 349.7 326 69.6
PGR119G0624 Punica granatum HOM05D004645 ORTHO05D005693 3.5e-94 349.4 327 68.5
Prupe.2G329500 Prunus persica HOM05D004645 ORTHO05D005693 1.0e-93 347.8 329 68.1
Oeu028988.1 Olea europaea HOM05D004645 ORTHO05D005693 1.3e-93 347.4 322 64.6
Potri.019G042800 Populus trichocarpa HOM05D004645 ORTHO05D005693 3.9e-93 345.9 370 62.2
RcHm_v2.0_Chr1g0384691 Rosa chinensis HOM05D004645 ORTHO05D005693 8.6e-93 344.7 327 66.7
PGSC0003DMG400026490 Solanum tuberosum HOM05D004645 ORTHO05D005693 1.9e-92 343.6 329 63.5
CAN.G732.33 Capsicum annuum HOM05D004645 ORTHO05D005693 5.6e-92 342.0 325 63.4
Gorai.013G184600 Gossypium raimondii HOM05D004645 ORTHO05D005693 1.6e-91 340.5 323 70.0
AL3G13140 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 8.0e-91 338.2 328 67.7
FAN10G3994 Fragaria x ananassa HOM05D004645 ORTHO05D005693 1.8e-90 337.0 324 64.5
FvH4_7g34300 Fragaria vesca HOM05D004645 ORTHO05D005693 2.3e-90 336.7 329 64.1
TWI32G1082 Tripterygium wilfordii HOM05D004645 ORTHO05D005693 4.0e-90 335.9 322 67.4
Peaxi162Scf00516g00425 Petunia axillaris HOM05D004645 ORTHO05D005693 1.5e-89 334.0 324 67.6
Sp3g02460 Schrenkiella parvula HOM05D004645 ORTHO05D005693 4.4e-89 332.4 336 66.4
Sed0013778 Sechium edule HOM05D004645 ORTHO05D005693 5.8e-89 332.0 323 67.2
Nitab4.5_0000021g0850 Nicotiana tabacum HOM05D004645 ORTHO05D005693 7.5e-89 331.6 248 70.2
HanXRQChr11g0333681 Helianthus annuus HOM05D004645 ORTHO05D005693 1.3e-88 330.9 320 60.3
ECA238G1292 Erigeron canadensis HOM05D004645 ORTHO05D005693 1.7e-88 330.5 246 72.0
Aa31LG5G13980 Aethionema arabicum HOM05D000507 ORTHO05D000416 2.2e-88 330.1 256 70.3
HanXRQChr14g0434641 Helianthus annuus HOM05D004645 ORTHO05D005693 2.2e-88 330.1 320 60.9
Lsat_1_v5_gn_8_3080 Lactuca sativa HOM05D004645 ORTHO05D005693 4.9e-88 328.9 319 63.6
Carub.0003s0260 Capsella rubella HOM05D004645 ORTHO05D005693 6.4e-88 328.6 343 64.1
MSTRG.26920 Avicennia marina HOM05D004645 ORTHO05D005693 8.3e-88 328.2 322 60.2
Oeu027899.1 Olea europaea HOM05D004645 ORTHO05D005693 1.9e-87 327.0 321 63.6
Lalb_Chr03g0037841 Lupinus albus HOM05D004645 ORTHO05D005693 5.4e-87 325.5 321 66.0
Lj3C883G6 Lonicera japonica HOM05D000507 ORTHO05D000416 7.0e-87 325.1 249 73.9
TAR633G2534 Trochodendron aralioides HOM05D004645 ORTHO05D005693 9.2e-87 324.7 241 73.0
Lalb_Chr19g0140101 Lupinus albus HOM05D004645 ORTHO05D005693 1.6e-86 323.9 320 59.7
ClCG09G013170 Citrullus lanatus HOM05D004645 ORTHO05D005693 6.0e-86 322.0 325 64.9
TPR.G9835 Trifolium pratense HOM05D004645 ORTHO05D005693 1.7e-85 320.5 324 67.0
Cc02_g00050 Coffea canephora HOM05D004645 ORTHO05D005693 2.3e-85 320.1 328 62.5
MELO3C014340.2 Cucumis melo HOM05D004645 ORTHO05D005693 3.0e-85 319.7 326 66.0
FAN03G2055 Fragaria x ananassa HOM05D004645 ORTHO05D005693 8.6e-85 318.2 349 62.2
COL.COLO4_15124 Corchorus olitorius HOM05D004645 ORTHO05D005693 1.5e-84 317.4 216 79.2
PSO063G6220 Papaver somniferum HOM05D004645 ORTHO05D005693 9.5e-84 314.7 323 65.0
PSO782G2658 Papaver somniferum HOM05D004645 ORTHO05D005693 2.1e-83 313.5 322 64.3
AT3G03460 Arabidopsis thaliana HOM05D004645 ORTHO05D005693 2.8e-83 313.2 333 65.5
Sabra19G0053400 Salix brachista HOM05D004645 ORTHO05D005693 3.6e-83 312.8 286 62.2
CsaV3_6G036830 Cucumis sativus L. HOM05D004645 ORTHO05D005693 9.8e-81 304.7 252 67.5
Aqoxy5G00549 Aquilegia oxysepala HOM05D004645 ORTHO05D005693 4.9e-80 302.4 332 60.8
BNapus_Darmor_BZH_scaffold_162p00170 Brassica napus HOM05D004645 ORTHO05D005693 7.1e-79 298.5 325 64.3
BolC1t05829H Brassica oleracea HOM05D004645 ORTHO05D005693 7.1e-79 298.5 325 64.3
Migut.L00703 Erythranthe guttata HOM05D004645 ORTHO05D005693 4.6e-78 295.8 340 57.6
Haze_00365 Corylus avellana HOM05D004645 ORTHO05D005693 1.3e-77 294.3 211 75.4
AUR62028214 Chenopodium quinoa HOM05D004645 ORTHO05D005693 1.9e-76 290.4 245 64.1
QL09p020526 Quercus lobata HOM05D004645 ORTHO05D005693 2.1e-75 287.0 210 74.8
unitig_92.g28227 Utricularia gibba HOM05D004645 ORTHO05D005693 2.1e-75 287.0 237 65.0
CDE04G1041 Ceratophyllum demersum HOM05D004645 ORTHO05D005693 4.7e-75 285.8 324 54.3
HanXRQChr05g0156891 Helianthus annuus HOM05D004645 ORTHO05D005693 4.7e-75 285.8 240 67.5
vmacro06368 Vaccinium macrocarpon HOM05D004645 ORTHO05D005693 1.1e-74 284.6 226 72.6
A06p26400 Brassica napus HOM05D004645 ORTHO05D005693 2.3e-74 283.5 328 62.2
BNapus_Darmor_BZH_scaffold_78p00150 Brassica napus HOM05D004645 ORTHO05D005693 2.3e-74 283.5 328 62.2
BraA01t04578Z Brassica rapa HOM05D004645 ORTHO05D005693 5.2e-74 282.3 328 62.2
Ca_19601_v3 Cicer arietinum L. HOM05D004645 ORTHO05D005693 1.2e-73 281.2 218 72.5
ECA233G1188 Erigeron canadensis HOM05D004645 ORTHO05D005693 4.4e-73 279.3 237 65.0
SHI15009 Sapria himalayana HOM05D004645 ORTHO05D005693 4.4e-73 279.3 334 56.0
DCAR_010525 Daucus carota HOM05D004645 ORTHO05D005693 9.9e-73 278.1 227 69.2
EL10Ac3g05041 Beta vulgaris HOM05D004645 ORTHO05D005693 3.8e-72 276.2 405 48.1
AUR62002096 Chenopodium quinoa HOM05D004645 ORTHO05D005693 3.8e-72 276.2 236 63.6
SGA_v2.0_scaffold18G08211 Striga asiatica HOM05D004645 ORTHO05D005693 1.6e-70 270.8 341 54.3
Os12g0465700 Oryza sativa ssp. japonica HOM05D004645 ORTHO05D005693 2.1e-70 270.4 319 53.9
DCAR_014580 Daucus carota HOM05D004645 ORTHO05D005693 1.7e-69 267.3 326 51.2
Ah.04g156130 Amaranthus hybridus HOM05D004645 ORTHO05D005693 5.1e-69 265.8 334 55.4
Sc08g0005180 Simmondsia chinensis HOM05D004645 ORTHO05D005693 6.2e-67 258.8 213 73.2
BcaC09g47748 Brassica carinata HOM05D004645 ORTHO05D005693 1.1e-66 258.1 319 58.9
Lj3g0007707 Lotus japonicus HOM05D004645 ORTHO05D005693 1.4e-66 257.7 205 70.7
Rhsim03G0224700 Rhododendron simsii HOM05D004645 ORTHO05D005693 2.4e-66 256.9 333 58.0
Cfa016080 Carpinus fangiana HOM05D004645 ORTHO05D005693 3.2e-63 246.5 183 73.2
HPP92_006448 Vanilla planifolia HOM05D004645 ORTHO05D005693 1.7e-61 240.7 330 57.0
ATR0582G008 Amborella trichopoda HOM05D004645 ORTHO05D005693 3.3e-60 236.5 322 48.1
SEGI_39287 Sequoiadendron giganteum HOM05D004645 ORTHO05D005693 4.9e-48 196.1 263 46.8
HPP92_027983 Vanilla planifolia HOM05D004645 ORTHO05D005693 1.1e-47 194.9 212 63.2
CARHR077490 Cardamine hirsuta HOM05D004645 ORTHO05D005693 4.2e-47 193.0 220 59.1
Psat7g154680 Pisum sativum HOM05D004645 ORTHO05D005693 1.0e-37 161.8 154 63.0
FAN01G0394 Fragaria x ananassa HOM05D004645 ORTHO05D005693 5.1e-37 159.5 102 83.3
TAR636G0353 Trochodendron aralioides HOM05D004645 ORTHO05D005693 1.5e-36 157.9 131 69.5
AagrBONN_evm.TU.Sc2ySwM_228.1766 Anthoceros agrestis HOM05D004645 ORTHO05D005693 9.1e-26 122.1 156 44.9
Mapoly0012s0180 Marchantia polymorpha HOM05D004645 ORTHO05D005693 1.5e-25 121.3 148 41.9
Pp3c11_2710 Physcomitrium patens HOM05D004645 ORTHO05D005693 2.2e-24 117.5 136 44.1
HPP92_028759 Vanilla planifolia HOM05D004645 ORTHO05D005693 1.9e-23 114.4 213 45.1
Os04g0393100 Oryza sativa ssp. japonica HOM05D004645 ORTHO05D005693 1.4e-21 108.2 121 45.5
Os04g0393200 Oryza sativa ssp. japonica HOM05D004645 ORTHO05D005693 1.7e-19 101.3 119 44.5
CBR_g4003 Chara braunii HOM05D004645 ORTHO05D005693 2.8e-19 100.5 148 38.5
Cpa.g.c34419 Carica papaya HOM05D004645 ORTHO05D005693 1.4e-18 98.2 124 59.7
Actinidia04560 Actinidia chinensis HOM05D004645 ORTHO05D005693 1.8e-18 97.8 112 64.3
Zm00001eb421230 Zea mays HOM05D004645 ORTHO05D005693 9.1e-18 95.5 130 38.5
Dinv17242 Davidia involucrata HOM05D004645 ORTHO05D005693 1.0e-16 92.0 115 66.1
Psat0s904g0040 Pisum sativum HOM05D004645 ORTHO05D005693 4.2e-15 86.7 112 51.8
FAN01G2860 Fragaria x ananassa HOM05D004645 ORTHO05D005693 8.8e-13 79.0 115 55.7
Haze_00364 Corylus avellana HOM05D004645 ORTHO05D005693 1.1e-12 78.6 121 60.3
AL3G45560 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 2.6e-12 77.4 53 64.2
Sabra13G0065800 Salix brachista HOM05D004645 ORTHO05D005693 7.4e-12 75.9 104 51.9
QL09p020516 Quercus lobata HOM05D004645 ORTHO05D005693 1.8e-10 71.2 37 78.4
ECA075G0001 Erigeron canadensis HOM05D004645 ORTHO05D005693 2.9e-08 63.9 35 80.0


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