Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 4.8e-70 267.7 134 100.0
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 4.7e-57 224.6 137 86.1
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 9.1e-45 183.7 143 69.9
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 2.1e-33 146.0 128 64.1
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 8.0e-33 144.1 138 61.6
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 8.3e-30 134.0 122 62.3
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 8.3e-30 134.0 122 62.3
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 2.4e-29 132.5 122 61.5
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 3.5e-28 128.6 134 56.0
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 4.6e-28 128.3 132 60.6
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 4.6e-28 128.3 132 60.6
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 6.0e-28 127.9 124 61.3
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 5.0e-27 124.8 139 56.8
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 5.6e-26 121.3 134 56.7
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 2.1e-25 119.4 139 52.5
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 1.7e-22 109.8 118 59.3
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 2.4e-21 105.9 134 53.0
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 4.1e-21 105.1 129 51.9
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 2.1e-20 102.8 139 51.1
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 2.1e-20 102.8 139 51.1
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 1.1e-16 90.5 65 67.7
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 3.1e-16 89.0 67 65.7
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 6.8e-16 87.8 75 54.7
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 2.6e-15 85.9 71 53.5
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 2.6e-15 85.9 102 44.1
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 3.4e-15 85.5 69 60.9
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 3.4e-15 85.5 91 52.7
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 3.4e-15 85.5 118 45.8
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 4.4e-15 85.1 75 54.7
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 4.4e-15 85.1 104 49.0
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 5.8e-15 84.7 100 47.0
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 7.6e-15 84.3 61 63.9
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 9.9e-15 84.0 137 40.9
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 9.9e-15 84.0 101 47.5
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 9.9e-15 84.0 98 44.9
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 1.3e-14 83.6 78 53.8
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 2.2e-14 82.8 72 55.6
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 6.4e-14 81.3 42 83.3
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 8.4e-14 80.9 78 51.3
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 8.4e-14 80.9 67 52.2
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 1.1e-13 80.5 98 41.8
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 1.4e-13 80.1 99 46.5
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 1.4e-13 80.1 124 37.9
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 1.4e-13 80.1 48 64.6
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 1.4e-13 80.1 34 91.2
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 1.9e-13 79.7 70 54.3
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 2.4e-13 79.3 99 43.4
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 2.4e-13 79.3 70 55.7
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 4.1e-13 78.6 70 45.7
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 5.4e-13 78.2 48 62.5
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 5.4e-13 78.2 88 44.3
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 5.4e-13 78.2 94 41.5
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 7.1e-13 77.8 34 85.3
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 7.1e-13 77.8 71 50.7
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 7.1e-13 77.8 61 52.5
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 7.1e-13 77.8 61 52.5
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 9.2e-13 77.4 63 58.7
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 1.2e-12 77.0 40 75.0
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.2e-12 77.0 61 52.5
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 1.6e-12 76.6 38 78.9
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 1.6e-12 76.6 46 67.4
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 2.1e-12 76.3 97 47.4
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 2.7e-12 75.9 38 76.3
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 2.7e-12 75.9 37 81.1
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 2.7e-12 75.9 38 78.9
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 4.6e-12 75.1 111 39.6
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 4.6e-12 75.1 67 58.2
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 6.0e-12 74.7 67 58.2
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 6.0e-12 74.7 67 58.2
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 7.8e-12 74.3 57 57.9
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 7.8e-12 74.3 39 71.8
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 1.3e-11 73.6 62 56.5
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.3e-11 73.6 61 57.4
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.7e-11 73.2 30 96.7
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 2.3e-11 72.8 30 93.3
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 3.0e-11 72.4 30 90.0
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 3.0e-11 72.4 30 90.0
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 3.9e-11 72.0 40 75.0
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 5.1e-11 71.6 32 87.5
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 5.1e-11 71.6 30 90.0
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 5.1e-11 71.6 88 42.0
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 5.1e-11 71.6 30 93.3
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 6.6e-11 71.2 30 93.3
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 6.6e-11 71.2 41 65.9
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 1.1e-10 70.5 68 51.5
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 1.1e-10 70.5 30 90.0
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 1.5e-10 70.1 88 40.9
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 1.5e-10 70.1 137 34.3
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 3.3e-10 68.9 30 90.0
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 4.3e-10 68.6 64 50.0
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 5.6e-10 68.2 69 47.8
AL6G28340 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.2e-09 67.0 73 47.9
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.2e-09 67.0 31 83.9
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 1.6e-09 66.6 31 83.9
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 2.8e-09 65.9 84 42.9
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 2.8e-09 65.9 61 52.5
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 2.8e-09 65.9 37 64.9
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 3.6e-09 65.5 116 38.8
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 4.7e-09 65.1 31 74.2
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 4.7e-09 65.1 32 75.0
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 4.7e-09 65.1 41 63.4
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 6.2e-09 64.7 90 40.0
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 6.2e-09 64.7 101 42.6
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 3.4e-07 58.9 30 73.3
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 2.2e-06 56.2 96 38.5


User provided reference genes

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