Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 0.0e+00 1364.0 688 100.0
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 0.0e+00 1187.6 685 88.9
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 0.0e+00 1106.3 692 82.4
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 8.5e-296 1020.0 698 77.7
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 9.1e-290 1000.0 696 76.1
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 9.5e-271 936.8 692 74.3
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 2.9e-259 898.7 702 71.7
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 1.1e-247 860.1 699 69.5
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 3.3e-247 858.6 704 68.9
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 1.6e-246 856.3 710 67.0
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 9.9e-244 847.0 703 68.4
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 1.1e-194 684.1 736 55.8
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 1.1e-154 551.2 735 47.6
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 1.3e-110 404.8 779 36.8
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 2.8e-105 387.1 490 46.1
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 1.1e-104 385.2 570 44.2
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 6.9e-104 382.5 677 38.3
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 2.0e-103 380.9 570 41.9
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 9.9e-103 378.6 692 37.7
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 3.8e-102 376.7 541 43.3
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 1.1e-101 375.2 576 41.5
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 1.4e-101 374.8 402 49.3
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 1.9e-101 374.4 386 52.3
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 7.1e-101 372.5 321 58.6
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 7.1e-101 372.5 384 53.6
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 7.1e-101 372.5 554 41.5
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 1.2e-100 371.7 694 39.2
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 1.2e-100 371.7 693 38.7
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 2.1e-100 370.9 321 57.3
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 6.0e-100 369.4 658 39.7
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 1.0e-99 368.6 281 64.1
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 1.0e-99 368.6 323 57.3
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 1.3e-99 368.2 657 39.4
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 3.0e-99 367.1 548 42.9
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 3.0e-99 367.1 675 37.9
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 6.7e-99 365.9 563 42.1
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 8.7e-99 365.5 601 40.8
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 1.1e-98 365.2 391 52.4
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 2.5e-98 364.0 321 57.9
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 1.3e-97 361.7 371 50.9
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 2.1e-97 360.9 674 38.3
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 3.7e-97 360.1 678 37.6
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 1.4e-96 358.2 389 50.9
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 1.4e-96 358.2 374 50.8
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 1.8e-96 357.8 333 55.9
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 3.1e-96 357.1 374 50.8
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 9.0e-96 355.5 598 40.1
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 3.4e-95 353.6 553 42.3
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.7e-94 351.3 321 56.4
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 1.7e-94 351.3 692 38.9
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 2.9e-94 350.5 677 39.1
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 3.8e-94 350.1 549 41.3
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 4.9e-94 349.7 308 58.1
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 4.9e-94 349.7 400 49.0
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 6.5e-94 349.4 543 41.3
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 1.4e-93 348.2 315 56.5
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 7.1e-93 345.9 306 56.9
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 1.2e-92 345.1 385 49.6
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 1.2e-92 345.1 676 37.4
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 2.1e-92 344.4 621 39.5
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 3.5e-92 343.6 379 51.2
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.0e-91 342.0 379 50.7
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 1.3e-91 341.7 545 41.1
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 2.3e-91 340.9 578 40.5
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 2.3e-91 340.9 662 38.2
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 3.0e-91 340.5 656 37.5
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 5.1e-91 339.7 425 46.8
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 3.3e-90 337.0 394 48.7
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 3.3e-90 337.0 421 46.6
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 1.3e-89 335.1 315 54.3
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 3.7e-89 333.6 311 55.6
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 1.4e-88 331.6 311 55.3
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 2.0e-87 327.8 314 54.5
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 4.5e-87 326.6 681 34.8
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 1.7e-86 324.7 393 49.1
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 1.1e-85 322.0 680 34.6
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 2.2e-81 307.8 391 45.3
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 5.0e-78 296.6 391 44.2
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 8.5e-78 295.8 263 57.0
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 6.1e-76 289.7 509 37.9
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 1.4e-75 288.5 210 65.2
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 2.3e-75 287.7 473 42.3
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 3.3e-74 283.9 232 59.5
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 1.3e-73 282.0 186 69.4
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 8.2e-73 279.3 487 41.7
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 4.1e-72 276.9 391 44.2
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 7.0e-72 276.2 479 40.3
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 4.5e-71 273.5 323 45.8
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 1.6e-68 265.0 250 58.4
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 4.4e-66 256.9 553 35.6
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 2.8e-65 254.2 203 61.6
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 7.0e-64 249.6 246 54.9
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 4.8e-57 226.9 304 41.8
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 9.1e-56 222.6 177 63.8
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 2.7e-55 221.1 257 47.1
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 1.9e-53 214.9 271 41.3
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 4.8e-49 200.3 261 47.5
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 2.0e-47 194.9 246 45.1
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 5.9e-47 193.4 462 33.1
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 1.8e-43 181.8 181 47.0
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 2.6e-42 177.9 120 68.3
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 1.8e-40 171.8 119 67.2
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 1.6e-39 168.7 565 29.6
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 1.2e-26 125.9 315 29.8
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 4.3e-21 107.5 172 41.9
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 4.3e-21 107.5 172 41.9
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 7.3e-21 106.7 137 47.4
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 1.1e-19 102.8 135 44.4


User provided reference genes

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