Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 5.4e-50 200.7 100 100.0
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 5.4e-50 200.7 100 100.0
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 1.1e-45 186.4 100 92.0
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 2.0e-44 182.2 101 90.1
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 4.1e-42 174.5 103 84.5
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 4.1e-42 174.5 103 84.5
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 4.1e-42 174.5 103 84.5
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 7.1e-42 173.7 100 84.0
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 7.1e-42 173.7 100 88.0
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 1.2e-41 172.9 103 83.5
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 1.2e-41 172.9 103 83.5
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 2.8e-38 161.8 100 82.0
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 1.3e-35 152.9 104 74.0
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 6.2e-30 134.0 108 61.1
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 4.4e-28 127.9 109 55.0
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 9.9e-28 126.7 110 56.4
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 1.7e-27 125.9 109 56.9
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 2.9e-27 125.2 110 56.4
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 4.9e-27 124.4 101 62.4
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 6.4e-27 124.0 106 56.6
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 6.4e-27 124.0 109 54.1
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 8.4e-27 123.6 111 55.0
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 1.1e-26 123.2 106 54.7
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 1.4e-26 122.9 107 55.1
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 1.9e-26 122.5 106 55.7
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 1.9e-26 122.5 109 53.2
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 2.4e-26 122.1 109 52.3
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 4.2e-26 121.3 107 56.1
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 4.2e-26 121.3 107 56.1
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 4.2e-26 121.3 109 55.0
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 5.4e-26 120.9 109 55.0
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 7.1e-26 120.6 106 55.7
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 7.1e-26 120.6 111 55.9
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 1.6e-25 119.4 107 54.2
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.6e-25 119.4 111 53.2
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.6e-25 119.4 107 56.1
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 2.1e-25 119.0 102 55.9
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 2.1e-25 119.0 108 54.6
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 2.7e-25 118.6 108 54.6
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 3.5e-25 118.2 110 52.7
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 3.5e-25 118.2 107 54.2
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 4.6e-25 117.9 112 51.8
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 4.6e-25 117.9 112 51.8
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 4.6e-25 117.9 108 53.7
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 4.6e-25 117.9 108 53.7
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 6.0e-25 117.5 106 55.7
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 1.0e-24 116.7 108 50.9
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 1.3e-24 116.3 106 50.9
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 1.7e-24 115.9 96 56.2
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 2.3e-24 115.5 108 53.7
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 2.3e-24 115.5 109 52.3
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 3.0e-24 115.2 105 55.2
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 3.0e-24 115.2 111 51.4
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 3.0e-24 115.2 109 53.2
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 3.9e-24 114.8 108 54.6
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 3.9e-24 114.8 111 51.4
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 3.9e-24 114.8 107 55.1
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 3.9e-24 114.8 109 54.1
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 3.9e-24 114.8 109 51.4
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 8.7e-24 113.6 107 54.2
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 8.7e-24 113.6 108 52.8
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 8.7e-24 113.6 108 51.9
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 1.1e-23 113.2 111 52.3
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.1e-23 113.2 109 53.2
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 1.5e-23 112.8 98 55.1
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 1.5e-23 112.8 107 51.4
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 1.5e-23 112.8 111 51.4
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 3.3e-23 111.7 101 57.4
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 4.3e-23 111.3 108 50.9
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 4.3e-23 111.3 108 53.7
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 4.3e-23 111.3 108 51.9
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 5.6e-23 110.9 108 52.8
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 7.3e-23 110.5 109 49.5
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 9.6e-23 110.2 106 55.7
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 9.6e-23 110.2 109 50.5
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 9.6e-23 110.2 111 50.5
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 9.6e-23 110.2 100 56.0
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 9.6e-23 110.2 108 50.9
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 1.6e-22 109.4 108 50.9
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 2.1e-22 109.0 101 54.5
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 2.8e-22 108.6 107 50.5
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 2.8e-22 108.6 107 50.5
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 2.8e-22 108.6 100 56.0
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 6.2e-22 107.5 108 49.1
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.4e-21 106.3 109 53.2
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 5.3e-21 104.4 104 54.8
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 5.3e-21 104.4 105 56.2
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 1.2e-20 103.2 109 50.5
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 1.5e-20 102.8 96 54.2
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 2.0e-20 102.4 99 51.5
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 9.9e-20 100.1 107 47.7
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 2.9e-19 98.6 103 48.5
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 6.4e-19 97.4 101 48.5
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 1.1e-18 96.7 72 63.9
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 1.2e-17 93.2 68 61.8
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 3.5e-17 91.7 65 67.7
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 3.5e-17 91.7 70 62.9
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 4.6e-17 91.3 67 61.2
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 3.9e-16 88.2 99 48.5
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 3.9e-16 88.2 67 59.7
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 1.9e-15 85.9 96 44.8
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 5.3e-13 77.8 99 42.4
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 8.4e-11 70.5 109 41.3
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 3.9e-08 61.6 73 42.5
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 6.2e-06 54.3 38 73.7


User provided reference genes

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