Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 1.0e-148 530.0 265 100.0
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 1.0e-140 503.4 265 93.6
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 6.5e-135 484.2 265 89.4
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 4.6e-133 478.0 265 89.4
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 4.6e-133 478.0 265 89.4
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 6.7e-132 474.2 256 91.8
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 2.5e-131 472.2 257 91.1
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 3.3e-131 471.9 262 88.5
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 1.4e-129 466.5 262 88.9
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 9.1e-129 463.8 262 89.7
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 9.1e-129 463.8 262 89.7
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 2.2e-114 416.0 262 80.2
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 2.6e-112 409.1 258 81.0
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 3.4e-99 365.5 261 69.0
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 1.5e-94 350.1 257 68.5
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 2.1e-93 346.3 257 68.5
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 8.0e-93 344.4 259 67.2
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 1.4e-92 343.6 246 69.9
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 1.4e-92 343.6 248 69.0
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 2.3e-92 342.8 261 65.1
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 2.0e-91 339.7 256 66.8
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 2.0e-91 339.7 257 66.5
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 3.4e-91 339.0 258 64.7
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 6.3e-90 334.7 247 66.8
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 2.4e-89 332.8 261 64.0
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 3.1e-89 332.4 259 64.1
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 3.1e-89 332.4 244 68.9
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 5.4e-89 331.6 254 65.7
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 7.0e-89 331.3 250 67.6
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 7.0e-89 331.3 255 65.9
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 7.0e-89 331.3 246 66.3
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 7.0e-89 331.3 245 66.1
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 9.2e-89 330.9 259 64.9
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 9.2e-89 330.9 265 62.3
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 1.6e-88 330.1 247 66.4
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 2.0e-88 329.7 246 68.3
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 3.5e-88 328.9 257 65.0
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 3.5e-88 328.9 246 67.9
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 5.9e-88 328.2 254 65.7
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 5.9e-88 328.2 255 65.1
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 5.9e-88 328.2 246 67.1
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 1.3e-87 327.0 257 64.2
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 2.9e-87 325.9 246 65.9
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 2.9e-87 325.9 244 65.6
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 3.3e-86 322.4 251 64.1
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 4.3e-86 322.0 239 67.8
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.1e-85 319.7 248 64.1
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 2.8e-85 319.3 280 61.8
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.8e-85 319.3 255 62.7
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 8.0e-85 317.8 240 67.5
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 8.0e-85 317.8 251 62.2
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 8.0e-85 317.8 245 64.5
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 1.4e-84 317.0 245 65.7
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 1.8e-84 316.6 245 65.7
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 2.3e-84 316.2 264 64.0
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 8.9e-84 314.3 258 60.1
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 1.2e-83 313.9 259 61.0
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 1.5e-83 313.5 264 63.3
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 2.6e-83 312.8 259 62.9
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 3.4e-83 312.4 251 62.9
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 4.4e-83 312.0 239 66.1
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 7.5e-83 311.2 288 56.6
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 1.7e-82 310.1 248 64.1
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 2.9e-82 309.3 256 62.1
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 8.3e-82 307.8 260 62.7
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 1.9e-81 306.6 257 59.9
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 1.9e-81 306.6 258 61.2
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 9.2e-81 304.3 253 62.5
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 1.6e-80 303.5 245 63.3
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 2.0e-80 303.1 248 62.5
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 2.0e-80 303.1 260 59.6
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.5e-80 302.4 273 57.9
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 3.5e-80 302.4 258 61.2
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 4.6e-80 302.0 280 57.1
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 2.3e-79 299.7 279 57.3
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 3.9e-79 298.9 257 58.0
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 6.6e-79 298.1 272 57.7
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 6.6e-79 298.1 254 61.8
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 1.1e-78 297.4 250 62.8
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 1.5e-78 297.0 257 59.1
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 2.5e-78 296.2 243 62.6
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 3.3e-78 295.8 250 62.0
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 4.3e-78 295.4 239 62.8
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 5.6e-78 295.0 279 56.6
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 5.6e-78 295.0 257 58.8
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 7.3e-78 294.7 226 65.9
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 9.5e-78 294.3 258 57.0
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 2.8e-77 292.7 259 60.2
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 1.1e-76 290.8 243 62.1
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 1.8e-76 290.0 256 59.0
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 5.4e-73 278.5 252 56.0
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 4.6e-72 275.4 236 62.7
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 6.6e-71 271.6 276 53.3
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 2.5e-70 269.6 266 57.1
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 2.1e-69 266.5 281 50.9
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 6.6e-63 245.0 193 65.8
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 4.4e-59 232.3 249 51.8
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 4.4e-59 232.3 183 67.2
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 1.9e-57 226.9 130 88.5
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 2.8e-53 213.0 131 74.8
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 3.1e-52 209.5 231 48.5
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 6.9e-52 208.4 269 43.5
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 1.2e-51 207.6 260 44.2
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 7.3e-46 188.3 263 44.1
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 1.1e-44 184.5 121 71.1
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 2.2e-42 176.8 180 46.1
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 5.1e-39 165.6 245 44.1
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 1.1e-36 157.9 247 41.7
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 9.3e-33 144.8 121 58.7
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 8.2e-21 105.1 151 41.7
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 1.5e-19 100.9 140 37.1
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 1.4e-17 94.4 114 46.5
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 3.6e-16 89.7 111 51.4
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 5.9e-11 72.4 46 69.6
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.5e-09 67.0 38 84.2
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 7.2e-09 65.5 46 63.0


User provided reference genes

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