Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G22570 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 7.4e-94 347.1 159 100.0
AT5G11820 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 2.0e-83 312.4 158 89.9
Carub.0006s1035 Capsella rubella HOM05D008373 ORTHO05D010873 5.9e-83 310.8 158 86.7
Sp6g31780 Schrenkiella parvula HOM05D008373 ORTHO05D010873 2.3e-71 272.3 158 75.9
A10p25930 Brassica napus HOM05D008373 ORTHO05D010873 2.0e-70 269.2 154 76.6
CARHR201340 Cardamine hirsuta HOM05D008373 ORTHO05D010873 4.4e-70 268.1 154 74.7
BolC9t59329H Brassica oleracea HOM05D008373 ORTHO05D010873 1.7e-69 266.2 154 76.0
BraA10t44655Z Brassica rapa HOM05D008373 ORTHO05D010873 1.7e-69 266.2 154 76.0
BcaC04g19192 Brassica carinata HOM05D008373 ORTHO05D010873 4.8e-69 264.6 154 75.3
C09p65010 Brassica napus HOM05D008373 ORTHO05D010873 1.1e-68 263.5 154 74.7
Thhalv10015656m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 2.0e-67 259.2 156 73.1
BcaNung02651 Brassica carinata HOM05D008373 ORTHO05D010873 1.7e-66 256.1 156 74.4
A02p01220 Brassica napus HOM05D008373 ORTHO05D010873 1.6e-64 249.6 156 70.5
BraA02t05101Z Brassica rapa HOM05D008373 ORTHO05D010873 1.6e-64 249.6 156 70.5
BcaC03g13394 Brassica carinata HOM05D008373 ORTHO05D010873 2.7e-64 248.8 156 70.5
BolC2t06488H Brassica oleracea HOM05D008373 ORTHO05D010873 9.1e-60 233.8 147 70.7
C02p05400 Brassica napus HOM05D008373 ORTHO05D010873 2.0e-59 232.6 148 71.6
THA.LOC104811243 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 5.9e-51 204.5 155 58.1
THA.LOC104811315 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 1.6e-27 126.7 146 43.8
C07p41930 Brassica napus HOM05D008373 ORTHO05D010873 2.5e-25 119.4 150 42.0
BolC7t44724H Brassica oleracea HOM05D008373 ORTHO05D010873 2.5e-25 119.4 150 42.7
THA.LOC104811242 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 4.3e-25 118.6 149 43.0
A06p36550 Brassica napus HOM05D008373 ORTHO05D010873 1.2e-24 117.1 150 42.0
BraA06t26581Z Brassica rapa HOM05D008373 ORTHO05D010873 1.2e-24 117.1 150 42.0
THA.LOC104811314 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 2.8e-24 115.9 147 41.5
Thhalv10015698m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 1.1e-23 114.0 151 39.1
BcaNung03984 Brassica carinata HOM05D008373 ORTHO05D010873 4.0e-23 112.1 150 41.3
A02p39180 Brassica napus HOM05D008373 ORTHO05D010873 1.2e-22 110.5 147 40.1
BraA02t08883Z Brassica rapa HOM05D008373 ORTHO05D010873 1.5e-22 110.2 143 39.2
Sp2g21670 Schrenkiella parvula HOM05D008373 ORTHO05D010873 2.0e-22 109.8 149 38.9
AT5G26050 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 5.8e-22 108.2 153 40.5
AL6G38040 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 1.7e-21 106.7 153 39.9
Carub.0006s2381 Capsella rubella HOM05D008373 ORTHO05D010873 4.9e-21 105.1 150 39.3
CARHR187330 Cardamine hirsuta HOM05D008373 ORTHO05D010873 4.9e-21 105.1 144 38.9
BcaB04g19754 Brassica carinata HOM05D008373 ORTHO05D010873 6.4e-21 104.8 142 38.7
Aa31LG3G15380 Aethionema arabicum HOM05D008373 ORTHO05D010873 8.4e-21 104.4 115 44.3
BcaC04g23598 Brassica carinata HOM05D008373 ORTHO05D010873 1.4e-20 103.6 142 36.6
C09p06580 Brassica napus HOM05D008373 ORTHO05D010873 1.4e-20 103.6 142 36.6
BolC9t53584H Brassica oleracea HOM05D008373 ORTHO05D010873 1.4e-20 103.6 142 36.6
BraA09t36244Z Brassica rapa HOM05D008373 ORTHO05D010873 2.4e-20 102.8 142 37.3
A09p06020 Brassica napus HOM05D008373 ORTHO05D010873 3.2e-20 102.4 142 37.3
Thhalv10005364m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 7.1e-20 101.3 145 39.3
BcaC03g17838 Brassica carinata HOM05D000073 ORTHO05D008214 1.7e-13 80.1 145 34.5
AT5G26060 Arabidopsis thaliana HOM05D008373 ORTHO05D015254 3.8e-13 79.0 137 38.0
C07p41920 Brassica napus HOM05D008373 ORTHO05D015254 1.4e-12 77.0 137 36.5
BolC7t44722H Brassica oleracea HOM05D008373 ORTHO05D015254 1.9e-12 76.6 137 36.5
Thhalv10005065m.g Eutrema salsugineum HOM05D008373 ORTHO05D015254 1.9e-12 76.6 125 36.8
A06p36560 Brassica napus HOM05D008373 ORTHO05D015254 2.4e-12 76.3 137 36.5
BraA06t26582Z Brassica rapa HOM05D008373 ORTHO05D015254 2.4e-12 76.3 137 36.5
AL6G38050 Arabidopsis lyrata HOM05D008373 ORTHO05D015254 3.2e-12 75.9 125 37.6
BcaNung03983 Brassica carinata HOM05D008373 ORTHO05D015254 1.6e-11 73.6 124 36.3
Aa31LG11G5030 Aethionema arabicum HOM05D008373 ORTHO05D015254 3.5e-11 72.4 110 40.9
THA.LOC104799169 Tarenaya hassleriana HOM05D008373 ORTHO05D015254 1.7e-10 70.1 110 38.2
C02p58780 Brassica napus HOM05D008373 ORTHO05D010873 3.0e-10 69.3 99 37.4
CARHR187340 Cardamine hirsuta HOM05D008373 ORTHO05D015254 6.6e-10 68.2 122 36.9
Carub.0006s2382 Capsella rubella HOM05D008373 ORTHO05D015254 3.3e-09 65.9 125 34.4
BolC2t11937H Brassica oleracea HOM05D008373 ORTHO05D010873 6.2e-08 61.6 100 36.0
RhsimUnG0181400 Rhododendron simsii HOM05D000256 ORTHO05D000119 9.0e-07 57.8 125 34.4
Psat6g065280 Pisum sativum HOM05D000256 ORTHO05D000119 2.0e-06 56.6 97 38.1
Sed0019144 Sechium edule HOM05D000256 ORTHO05D000119 5.8e-06 55.1 109 33.0
Rhsim07G0183000 Rhododendron simsii HOM05D000560 ORTHO05D000417 7.6e-06 54.7 143 31.5
FAN24G1258 Fragaria x ananassa HOM05D009280 ORTHO05D012103 9.9e-06 54.3 124 30.6


User provided reference genes

Program Settings