Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G22510 Arabidopsis lyrata HOM05D007010 ORTHO05D008591 1.5e-69 266.2 147 100.0
AT5G11760 Arabidopsis thaliana HOM05D007010 ORTHO05D008591 8.0e-34 147.5 180 52.8
Sp6g31840 Schrenkiella parvula HOM05D007010 ORTHO05D008591 3.7e-23 112.1 146 46.6
Sp7g31830 Schrenkiella parvula HOM05D007010 ORTHO05D008591 1.1e-22 110.5 145 46.9
Carub.0006s1029 Capsella rubella HOM05D007010 ORTHO05D008591 3.1e-22 109.0 158 50.0
Aa31LG3G15440 Aethionema arabicum HOM05D007010 ORTHO05D008591 1.0e-20 104.0 149 45.6
Thhalv10014970m.g Eutrema salsugineum HOM05D007010 ORTHO05D008591 2.9e-20 102.4 162 43.8
CARHR201450 Cardamine hirsuta HOM05D007010 ORTHO05D008591 5.0e-20 101.7 152 38.8
Thhalv10027214m.g Eutrema salsugineum HOM05D007010 ORTHO05D008591 7.2e-19 97.8 144 41.7
BcaB03g11855 Brassica carinata HOM05D007010 ORTHO05D008591 1.4e-14 83.6 182 34.6
A08p17130 Brassica napus HOM05D007010 ORTHO05D008591 4.5e-13 78.6 183 33.9
Solyc12g095940.1 Solanum lycopersicum HOM05D007010 ORTHO05D008591 7.8e-13 77.8 115 40.9
Sopen12g031840 Solanum pennellii HOM05D007010 ORTHO05D008591 7.8e-13 77.8 115 40.9
PGSC0003DMG400029388 Solanum tuberosum HOM05D007010 ORTHO05D008591 1.3e-12 77.0 114 40.4
BcaC01g00931 Brassica carinata HOM05D007010 ORTHO05D008591 1.7e-12 76.6 177 33.9
C03p86090 Brassica napus HOM05D007010 ORTHO05D008591 1.7e-12 76.6 177 33.9
BolC3t20897H Brassica oleracea HOM05D007010 ORTHO05D008591 1.7e-12 76.6 177 33.9
Oeu037327.1 Olea europaea HOM05D007010 ORTHO05D008591 2.9e-12 75.9 142 35.2
ECA240G3686 Erigeron canadensis HOM05D007010 ORTHO05D008591 1.9e-11 73.2 128 31.2
THA.LOC104811249 Tarenaya hassleriana HOM05D007010 ORTHO05D008591 3.3e-11 72.4 140 34.3
TWI63G1421 Tripterygium wilfordii HOM05D007010 ORTHO05D008591 5.6e-11 71.6 143 31.5
CsaV3_4G035530 Cucumis sativus L. HOM05D007010 ORTHO05D008591 1.6e-10 70.1 107 37.4
CAN.G208.75 Capsicum annuum HOM05D007010 ORTHO05D008591 2.8e-10 69.3 115 38.3
Thecc.09G051700 Theobroma cacao HOM05D007010 ORTHO05D008591 2.8e-10 69.3 146 32.9
Nn8g38932 Nelumbo nucifera HOM05D007010 ORTHO05D008591 3.6e-10 68.9 135 34.1
Nn8g38936 Nelumbo nucifera HOM05D007010 ORTHO05D008591 3.6e-10 68.9 135 34.1
Oeu018653.1 Olea europaea HOM05D007010 ORTHO05D008591 3.6e-10 68.9 122 34.4
Gohir.A06G087901 Gossypium hirsutum HOM05D007010 ORTHO05D008591 4.0e-09 65.5 115 36.5
Potri.018G056000 Populus trichocarpa HOM05D007010 ORTHO05D008591 4.0e-09 65.5 137 32.1
SGA_v2.0_scaffold52G19071 Striga asiatica HOM05D007010 ORTHO05D008591 4.0e-09 65.5 144 31.9
Aa31LG8G6820 Aethionema arabicum HOM05D007010 ORTHO05D008591 5.2e-09 65.1 155 34.8
SalBow2G0398 Salvia bowleyana HOM05D007010 ORTHO05D008591 8.9e-09 64.3 126 33.3
SalBow2G1284 Salvia bowleyana HOM05D007010 ORTHO05D008591 8.9e-09 64.3 126 33.3
Eucgr.C02362 Eucalyptus grandis HOM05D007010 ORTHO05D008591 1.2e-08 63.9 134 30.6
Sed0004842 Sechium edule HOM05D007010 ORTHO05D008591 1.2e-08 63.9 107 36.4
TAR497G0007 Trochodendron aralioides HOM05D007010 ORTHO05D008591 1.5e-08 63.5 129 31.8
Atru.chr1.3280 Acer truncatum HOM05D007010 ORTHO05D008591 2.0e-08 63.2 151 31.1
Lsat_1_v5_gn_9_89520 Lactuca sativa HOM05D007010 ORTHO05D008591 2.6e-08 62.8 148 35.1
Pp3c2_14930 Physcomitrium patens HOM05D007010 ORTHO05D008591 5.8e-08 61.6 157 32.5
QL05p000846 Quercus lobata HOM05D007010 ORTHO05D008591 5.8e-08 61.6 106 34.9
QL05p001142 Quercus lobata HOM05D007010 ORTHO05D008591 5.8e-08 61.6 106 36.8
Haze_03853 Corylus avellana HOM05D007010 ORTHO05D008591 7.5e-08 61.2 107 37.4
Gohir.D06G088700 Gossypium hirsutum HOM05D007010 ORTHO05D008591 7.5e-08 61.2 115 33.0
TAR383G0702 Trochodendron aralioides HOM05D007010 ORTHO05D008591 7.5e-08 61.2 126 31.7
CANSAT56G1710 Cannabis sativa HOM05D007010 ORTHO05D008591 1.3e-07 60.5 135 31.9
SalBow7G3522 Salvia bowleyana HOM05D007010 ORTHO05D008591 1.3e-07 60.5 122 30.3
Hund03353 Selenicereus undatus HOM05D007010 ORTHO05D008591 1.3e-07 60.5 145 33.8
TPR.G16317 Trifolium pratense HOM05D007010 ORTHO05D008591 1.3e-07 60.5 147 29.3
Nn8g38933 Nelumbo nucifera HOM05D007010 ORTHO05D008591 1.7e-07 60.1 131 32.1
Lj7P280T30 Lonicera japonica HOM05D007010 ORTHO05D008591 2.9e-07 59.3 124 31.5
BraA08t33674Z Brassica rapa HOM05D007010 ORTHO05D008591 4.9e-07 58.5 173 30.1
ATR0697G019 Amborella trichopoda HOM05D007010 ORTHO05D008591 8.3e-07 57.8 33 66.7
Cfa017938 Carpinus fangiana HOM05D007010 ORTHO05D008591 8.3e-07 57.8 33 63.6
Duzib168G1521 Durio zibethinus HOM05D007010 ORTHO05D008591 8.3e-07 57.8 117 32.5
Migut.L00284 Erythranthe guttata HOM05D007010 ORTHO05D008591 8.3e-07 57.8 150 27.3
HanXRQChr13g0410661 Helianthus annuus HOM05D007010 ORTHO05D008591 1.1e-06 57.4 153 28.8
Lj4g0022512 Lotus japonicus HOM05D007010 ORTHO05D008591 1.4e-06 57.0 33 63.6
Psat7g115760 Pisum sativum HOM05D007010 ORTHO05D008591 1.4e-06 57.0 148 30.4
Ciclev10009901m.g Citrus clementina HOM05D007010 ORTHO05D008591 1.9e-06 56.6 143 30.1
Sc09g0009690 Simmondsia chinensis HOM05D007010 ORTHO05D008591 1.9e-06 56.6 114 32.5
Prupe.1G414500 Prunus persica HOM05D007010 ORTHO05D008591 2.4e-06 56.2 73 34.2
FAN27G2071 Fragaria x ananassa HOM05D007010 ORTHO05D008591 3.2e-06 55.8 33 60.6
Glyma.07G198700 Glycine max HOM05D007010 ORTHO05D008591 3.2e-06 55.8 150 29.3
FvH4_2g32140 Fragaria vesca HOM05D007010 ORTHO05D008591 4.1e-06 55.5 33 60.6
FAN24G3148 Fragaria x ananassa HOM05D007010 ORTHO05D008591 4.1e-06 55.5 33 60.6
Lalb_Chr05g0218511 Lupinus albus HOM05D007010 ORTHO05D008591 4.1e-06 55.5 131 29.8
RcHm_v2.0_Chr6g0310541 Rosa chinensis HOM05D007010 ORTHO05D008591 4.1e-06 55.5 33 60.6
Cpa.g.sc7.196 Carica papaya HOM05D007010 ORTHO05D008591 5.4e-06 55.1 127 26.8
Potri.006G232200 Populus trichocarpa HOM05D007010 ORTHO05D008591 5.4e-06 55.1 135 28.9
CBR_g70706 Chara braunii HOM05D007010 ORTHO05D008591 7.0e-06 54.7 33 63.6
Medtr4g088585 Medicago truncatula HOM05D007010 ORTHO05D008591 7.0e-06 54.7 152 29.6
SEGI_19332 Sequoiadendron giganteum HOM05D007010 ORTHO05D008591 7.0e-06 54.7 107 41.1
Mapoly0094s0032 Marchantia polymorpha HOM05D007010 ORTHO05D008591 9.2e-06 54.3 146 29.5


User provided reference genes

Program Settings