Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G21190 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 9.1e-160 567.4 413 100.0
AT5G10660 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 1.2e-119 434.1 393 84.2
CARHR202650 Cardamine hirsuta HOM05D008799 ORTHO05D010975 2.2e-105 386.7 414 66.2
Carub.0006s0914 Capsella rubella HOM05D008799 ORTHO05D010975 5.4e-104 382.1 417 73.6
Sp6g32790 Schrenkiella parvula HOM05D008799 ORTHO05D010975 7.8e-103 378.3 414 71.0
BcaB01g06270 Brassica carinata HOM05D008799 ORTHO05D010975 4.8e-84 315.8 435 61.1
BraA03t09809Z Brassica rapa HOM05D008799 ORTHO05D010975 2.4e-83 313.5 434 60.6
A03p04690 Brassica napus HOM05D008799 ORTHO05D010975 5.8e-82 308.9 429 66.0
BcaB05g21498 Brassica carinata HOM05D008799 ORTHO05D010975 7.1e-80 302.0 419 58.7
A02p00590 Brassica napus HOM05D008799 ORTHO05D010975 1.3e-78 297.7 416 60.6
BcaC03g13324 Brassica carinata HOM05D008799 ORTHO05D010975 2.0e-74 283.9 417 61.2
C03p05400 Brassica napus HOM05D008799 ORTHO05D010975 1.7e-73 280.8 434 56.7
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 1.7e-73 280.8 433 56.8
A10p26930 Brassica napus HOM05D008799 ORTHO05D010975 3.9e-70 269.6 414 55.3
BraA10t44744Z Brassica rapa HOM05D008799 ORTHO05D010975 5.6e-69 265.8 417 50.8
BraA02t05042Z Brassica rapa HOM05D008799 ORTHO05D010975 9.6e-69 265.0 416 59.4
Aa31LG3G16460 Aethionema arabicum HOM05D008799 ORTHO05D010975 6.2e-68 262.3 453 52.3
C02p04580 Brassica napus HOM05D008799 ORTHO05D010975 2.0e-66 257.3 417 58.0
BcaB01g05508 Brassica carinata HOM05D008799 ORTHO05D010975 7.9e-63 245.4 434 56.5
C09p66120 Brassica napus HOM05D008799 ORTHO05D010975 4.3e-61 239.6 417 47.7
BolC9t59432H Brassica oleracea HOM05D008799 ORTHO05D010975 4.3e-61 239.6 417 47.7
CARHR188570 Cardamine hirsuta HOM05D008799 ORTHO05D010975 7.4e-61 238.8 447 50.3
BcaC04g19292 Brassica carinata HOM05D008799 ORTHO05D010975 9.6e-61 238.4 241 62.7
BcaB08g37100 Brassica carinata HOM05D008799 ORTHO05D010975 2.5e-56 223.8 242 62.0
BolC2t06418H Brassica oleracea HOM05D008799 ORTHO05D010975 1.6e-55 221.1 417 57.8
THA.LOC104814972 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 3.0e-54 216.9 419 49.9
Sp2g22570 Schrenkiella parvula HOM05D008799 ORTHO05D010975 5.1e-54 216.1 449 48.8
AT5G24880 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 1.9e-53 214.2 452 49.1
A06p35660 Brassica napus HOM05D008799 ORTHO05D010975 9.7e-53 211.8 427 50.4
AL6G36554 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 3.1e-51 206.8 458 47.4
Thhalv10004239m.g Eutrema salsugineum HOM05D008799 ORTHO05D010975 3.1e-51 206.8 391 51.4
BraA06t26491Z Brassica rapa HOM05D008799 ORTHO05D010975 4.1e-51 206.5 445 50.3
THA.LOC104803324 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 1.3e-49 201.4 417 41.2
BcaNung05897 Brassica carinata HOM05D008799 ORTHO05D010975 2.5e-48 197.2 434 51.6
C07p42890 Brassica napus HOM05D008799 ORTHO05D010975 2.3e-46 190.7 442 48.4
BolC7t44817H Brassica oleracea HOM05D008799 ORTHO05D010975 2.3e-46 190.7 442 48.4
Carub.0006s2273 Capsella rubella HOM05D008799 ORTHO05D010975 2.0e-37 161.0 436 48.9
Aa31LG11G4080 Aethionema arabicum HOM05D008799 ORTHO05D010975 2.2e-20 104.4 255 42.4
BolC2t12057H Brassica oleracea HOM05D008799 ORTHO05D010975 1.2e-15 88.6 260 40.4
Potri.006G274600 Populus trichocarpa HOM05D014278 ORTHO05D009846 3.8e-09 67.0 445 27.9
AT5G10680 Arabidopsis thaliana HOM05D000372 ORTHO05D003436 6.6e-09 66.2 70 84.3
Manes.16G135600 Manihot esculenta HOM05D014278 ORTHO05D009846 4.3e-08 63.5 440 34.3
Cpa.g.sc23.16 Carica papaya HOM05D013263 ORTHO05D009846 7.3e-08 62.8 50 74.0
Sabra18G0011200 Salix brachista HOM05D014278 ORTHO05D009846 7.3e-08 62.8 446 25.3
Sabra18G0013600 Salix brachista HOM05D014278 ORTHO05D009846 7.3e-08 62.8 446 25.3


User provided reference genes

Program Settings