Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G19880 Arabidopsis lyrata HOM05D009072 ORTHO05D013961 2.4e-43 179.1 142 100.0
AT5G09480 Arabidopsis thaliana HOM05D009072 ORTHO05D013961 1.2e-31 140.2 145 86.2
Carub.0006s0805 Capsella rubella HOM05D009072 ORTHO05D013961 1.2e-29 133.7 143 83.9
BcaB08g37201 Brassica carinata HOM05D009072 ORTHO05D013961 1.7e-25 119.8 144 70.8
A10p27810 Brassica napus HOM05D009072 ORTHO05D013961 5.0e-25 118.2 144 68.1
CARHR203900 Cardamine hirsuta HOM05D009072 ORTHO05D013961 4.7e-23 111.7 134 79.1
BraA03t09759Z Brassica rapa HOM05D009072 ORTHO05D013961 7.0e-19 97.8 138 72.5
A03p04150 Brassica napus HOM05D009072 ORTHO05D013961 2.0e-18 96.3 138 71.7
C03p04610 Brassica napus HOM05D009072 ORTHO05D013961 2.7e-18 95.9 154 59.7
BcaB01g05573 Brassica carinata HOM05D009072 ORTHO05D013961 5.9e-18 94.7 135 70.4
Thhalv10014586m.g Eutrema salsugineum HOM05D009072 ORTHO05D013961 1.4e-14 83.6 202 54.5
Sp6g33850 Schrenkiella parvula HOM05D009072 ORTHO05D013961 2.2e-12 76.3 204 54.4
C09p67900 Brassica napus HOM05D009072 ORTHO05D013961 3.5e-10 68.9 44 77.3
BolC9t59550H Brassica oleracea HOM05D009072 ORTHO05D013961 3.5e-10 68.9 44 77.3
BraA10t44830Z Brassica rapa HOM05D009072 ORTHO05D012584 5.9e-10 68.2 44 77.3
Aa31LG3G17500 Aethionema arabicum HOM05D009072 ORTHO05D013961 2.3e-06 56.2 55 52.7
BolC3t12993H Brassica oleracea HOM05D000856 ORTHO05D104791 2.3e-06 56.2 126 61.1


User provided reference genes

Program Settings