Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G19780 Arabidopsis lyrata HOM05D004981 ORTHO05D005635 2.0e-155 552.7 352 100.0
AT5G09390 Arabidopsis thaliana HOM05D004981 ORTHO05D005635 5.2e-140 501.5 352 91.2
Carub.0006s0794 Capsella rubella HOM05D004981 ORTHO05D005635 4.0e-132 475.3 357 89.9
Thhalv10013574m.g Eutrema salsugineum HOM05D004981 ORTHO05D005635 4.6e-120 435.3 371 81.9
Sp6g33940 Schrenkiella parvula HOM05D004981 ORTHO05D005635 3.3e-118 429.1 348 77.9
CARHR204020 Cardamine hirsuta HOM05D004981 ORTHO05D005635 2.0e-107 393.3 345 78.0
A10p27880 Brassica napus HOM05D004981 ORTHO05D005635 2.7e-104 382.9 352 68.8
BraA10t44837Z Brassica rapa HOM05D004981 ORTHO05D005635 5.1e-103 378.6 352 68.2
Aa31LG3G17630 Aethionema arabicum HOM05D004981 ORTHO05D005635 7.4e-102 374.8 362 67.4
BcaB08g37209 Brassica carinata HOM05D004981 ORTHO05D005635 5.5e-97 358.6 303 74.9
C09p67980 Brassica napus HOM05D004981 ORTHO05D005635 3.3e-94 349.4 301 66.8
BolC9t59557H Brassica oleracea HOM05D004981 ORTHO05D005635 3.3e-94 349.4 301 67.1
THA.LOC104818438 Tarenaya hassleriana HOM05D004981 ORTHO05D005635 1.6e-80 303.9 400 58.0
VMungo0540G0644 Vigna mungo HOM05D004981 ORTHO05D005635 3.3e-62 243.0 377 49.9
Medtr2g008810 Medicago truncatula HOM05D004981 ORTHO05D005635 7.0e-60 235.3 367 48.8
Duzib132G0770 Durio zibethinus HOM05D004981 ORTHO05D005635 4.5e-59 232.6 420 45.7
Gohir.D13G054600 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.0e-58 231.5 412 46.8
Phvul.006G206700 Phaseolus vulgaris HOM05D004981 ORTHO05D005635 3.8e-58 229.6 376 50.3
Cpa.g.sc49.24 Carica papaya HOM05D004981 ORTHO05D005635 6.5e-58 228.8 295 50.8
Gorai.013G061400 Gossypium raimondii HOM05D004981 ORTHO05D005635 1.1e-57 228.0 412 46.6
Gohir.A13G067000 Gossypium hirsutum HOM05D004981 ORTHO05D005635 2.5e-57 226.9 412 46.6
arahy.Tifrunner.gnm1.ann1.NS4PA6 Arachis hypogaea HOM05D004981 ORTHO05D005635 3.2e-57 226.5 417 45.8
arahy.Tifrunner.gnm1.ann1.NXB9BB Arachis hypogaea HOM05D004981 ORTHO05D005635 3.2e-57 226.5 421 45.1
Gohir.A03G173700 Gossypium hirsutum HOM05D004981 ORTHO05D005635 3.2e-57 226.5 418 44.3
Glyma.15G053300 Glycine max HOM05D004981 ORTHO05D005635 1.2e-56 224.6 420 45.0
TWI59G1067 Tripterygium wilfordii HOM05D004981 ORTHO05D005635 2.7e-56 223.4 410 44.4
Manes.06G012400 Manihot esculenta HOM05D004981 ORTHO05D005635 4.7e-56 222.6 414 44.7
Ca_00133_v3 Cicer arietinum L. HOM05D004981 ORTHO05D005635 6.1e-56 222.2 405 44.2
MELO3C018646.2 Cucumis melo HOM05D004981 ORTHO05D005635 6.1e-56 222.2 407 44.7
Thecc.02G139100 Theobroma cacao HOM05D004981 ORTHO05D005635 6.1e-56 222.2 310 48.1
Lj6g0025255 Lotus japonicus HOM05D004981 ORTHO05D005635 8.0e-56 221.9 423 43.3
Sed0011642 Sechium edule HOM05D004981 ORTHO05D005635 8.0e-56 221.9 406 43.8
CSS0034779 Camellia sinensis var. sinensis HOM05D004981 ORTHO05D005635 1.4e-55 221.1 409 45.2
CANSAT11G0061 Cannabis sativa HOM05D004981 ORTHO05D005635 1.4e-55 221.1 396 47.2
Duzib248G0633 Durio zibethinus HOM05D004981 ORTHO05D005635 4.0e-55 219.5 292 49.7
Gorai.005G219800 Gossypium raimondii HOM05D004981 ORTHO05D005635 4.0e-55 219.5 420 45.5
CsaV3_7G006460 Cucumis sativus L. HOM05D004981 ORTHO05D005635 5.2e-55 219.2 407 44.5
Glyma.08G179200 Glycine max HOM05D004981 ORTHO05D005635 6.7e-55 218.8 420 45.2
Lalb_Chr20g0123041 Lupinus albus HOM05D004981 ORTHO05D005635 6.7e-55 218.8 413 45.3
Atru.chr5.2124 Acer truncatum HOM05D004981 ORTHO05D005635 2.0e-54 217.2 431 46.6
Potri.001G205700 Populus trichocarpa HOM05D004981 ORTHO05D005635 2.0e-54 217.2 417 42.7
CiPaw.06G153000 Carya illinoinensis HOM05D004981 ORTHO05D005635 2.6e-54 216.9 275 51.3
Gohir.D02G196800 Gossypium hirsutum HOM05D004981 ORTHO05D005635 2.6e-54 216.9 420 45.0
Potri.003G023700 Populus trichocarpa HOM05D004981 ORTHO05D005635 4.4e-54 216.1 405 44.7
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 2.8e-53 213.4 406 44.1
GSVIVG01029180001 Vitis vinifera HOM05D004981 ORTHO05D005635 4.8e-53 212.6 417 44.8
Psat1g216680 Pisum sativum HOM05D004981 ORTHO05D005635 6.3e-53 212.2 328 44.8
COL.COLO4_24958 Corchorus olitorius HOM05D004981 ORTHO05D005635 4.1e-52 209.5 249 53.0
PGR142G3166 Punica granatum HOM05D004981 ORTHO05D005635 1.6e-51 207.6 410 45.4
PGSC0003DMG400011507 Solanum tuberosum HOM05D004981 ORTHO05D005635 1.6e-51 207.6 396 44.9
Solyc04g009060.4 Solanum lycopersicum HOM05D004981 ORTHO05D005635 2.7e-51 206.8 395 45.1
QL11p020696 Quercus lobata HOM05D004981 ORTHO05D005635 4.5e-51 206.1 282 49.3
Dinv24195 Davidia involucrata HOM05D004981 ORTHO05D005635 5.9e-51 205.7 416 44.2
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 1.0e-50 204.9 240 54.6
CDE10G0645 Ceratophyllum demersum HOM05D004981 ORTHO05D005635 1.0e-50 204.9 414 42.3
Sopen04g004240 Solanum pennellii HOM05D004981 ORTHO05D005635 2.2e-50 203.8 395 44.8
TPR.G9514 Trifolium pratense HOM05D004981 ORTHO05D005635 2.2e-50 203.8 333 48.9
Ciclev10025761m.g Citrus clementina HOM05D004981 ORTHO05D005635 5.0e-50 202.6 415 43.1
ClCG09G015370 Citrullus lanatus HOM05D004981 ORTHO05D005635 6.5e-50 202.2 411 42.3
Prupe.8G061500 Prunus persica HOM05D004981 ORTHO05D005635 6.5e-50 202.2 326 43.9
Sc20g0002060 Simmondsia chinensis HOM05D004981 ORTHO05D005635 6.5e-50 202.2 297 46.1
Dinv09034 Davidia involucrata HOM05D004981 ORTHO05D005635 1.5e-49 201.1 232 53.9
Eucgr.I02666 Eucalyptus grandis HOM05D004981 ORTHO05D005635 1.9e-49 200.7 236 57.2
HanXRQChr16g0514321 Helianthus annuus HOM05D004981 ORTHO05D005635 1.9e-49 200.7 368 45.7
Migut.B00612 Erythranthe guttata HOM05D004981 ORTHO05D005635 2.5e-49 200.3 364 45.6
CAN.G274.6 Capsicum annuum HOM05D004981 ORTHO05D005635 1.6e-48 197.6 396 44.2
MBI02_g08724_MAGBIO Magnolia biondii HOM05D004981 ORTHO05D005635 1.6e-48 197.6 377 46.4
Sabra03G0014800 Salix brachista HOM05D004981 ORTHO05D005635 1.6e-48 197.6 226 53.1
TAR114G0002 Trochodendron aralioides HOM05D004981 ORTHO05D005635 2.1e-48 197.2 234 55.6
SGA_v2.0_scaffold83G26298 Striga asiatica HOM05D004981 ORTHO05D005635 2.7e-48 196.8 412 39.8
Lj5A239G83 Lonicera japonica HOM05D004981 ORTHO05D005635 3.6e-48 196.4 287 46.3
MD05G1045100 Malus domestica HOM05D004981 ORTHO05D005635 4.7e-48 196.1 425 42.1
Oeu047361.1 Olea europaea HOM05D004981 ORTHO05D005635 8.0e-48 195.3 324 43.2
Nn5g30124 Nelumbo nucifera HOM05D004981 ORTHO05D005635 5.2e-47 192.6 420 41.2
Rhsim05G0107500 Rhododendron simsii HOM05D004981 ORTHO05D005635 6.8e-47 192.2 234 53.4
Rhsim05G0107600 Rhododendron simsii HOM05D004981 ORTHO05D005635 1.5e-46 191.0 234 52.1
Cc02_g21590 Coffea canephora HOM05D004981 ORTHO05D005635 2.6e-46 190.3 406 42.6
Nitab4.5_0008051g0010 Nicotiana tabacum HOM05D004981 ORTHO05D005635 4.4e-46 189.5 315 44.8
MSTRG.20297 Avicennia marina HOM05D004981 ORTHO05D005635 9.8e-46 188.3 231 50.6
Sabra01G0158000 Salix brachista HOM05D004981 ORTHO05D005635 7.0e-44 182.2 291 43.6
Hma1.2p1_0704F.1_g206680 Hydrangea macrophylla HOM05D004981 ORTHO05D005635 1.6e-43 181.0 340 44.4
PSO781G0052 Papaver somniferum HOM05D004981 ORTHO05D005635 2.7e-43 180.3 378 43.9
ECA234G4021 Erigeron canadensis HOM05D004981 ORTHO05D005635 5.9e-43 179.1 382 43.2
RcHm_v2.0_Chr7g0191681 Rosa chinensis HOM05D004981 ORTHO05D005635 7.7e-43 178.7 384 43.0
Prupe.5G160300 Prunus persica HOM05D004981 ORTHO05D005635 1.3e-42 177.9 377 46.4
Medtr5g017190 Medicago truncatula HOM05D004981 ORTHO05D005635 3.8e-42 176.4 237 47.7
FAN18G1425 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.1e-41 174.9 385 42.1
Oeu011769.5 Olea europaea HOM05D004981 ORTHO05D005635 1.5e-41 174.5 340 39.1
Lsat_1_v5_gn_5_107300 Lactuca sativa HOM05D004981 ORTHO05D005635 2.5e-41 173.7 370 43.8
Peaxi162Scf00152g01024 Petunia axillaris HOM05D004981 ORTHO05D005635 4.2e-41 172.9 331 39.9
EL10Ac9g21471 Beta vulgaris HOM05D004981 ORTHO05D005635 5.5e-41 172.6 314 45.9
FAN04G0403 Fragaria x ananassa HOM05D004981 ORTHO05D005635 7.2e-41 172.2 386 42.7
Aqoxy6G00803 Aquilegia oxysepala HOM05D004981 ORTHO05D005635 1.4e-39 167.9 378 41.3
FAN08G0200 Fragaria x ananassa HOM05D004981 ORTHO05D005635 2.0e-38 164.1 228 50.4
FvH4_5g07000 Fragaria vesca HOM05D004981 ORTHO05D005635 2.6e-38 163.7 389 40.9
AUR62010122 Chenopodium quinoa HOM05D004981 ORTHO05D005635 3.4e-38 163.3 377 40.6
ATR0753G166 Amborella trichopoda HOM05D004981 ORTHO05D005635 7.5e-38 162.2 233 45.9
COL.COLO4_15286 Corchorus olitorius HOM05D004981 ORTHO05D005635 7.5e-38 162.2 228 51.8
DCAR_021855 Daucus carota HOM05D004981 ORTHO05D005635 7.5e-38 162.2 362 38.1
TPR.G21754 Trifolium pratense HOM05D004981 ORTHO05D005635 7.5e-38 162.2 206 51.0
Hund00058 Selenicereus undatus HOM05D004981 ORTHO05D005635 4.9e-37 159.5 336 40.8
SalBow5G0436 Salvia bowleyana HOM05D004981 ORTHO05D005635 1.1e-36 158.3 357 39.8
PSO541G0435 Papaver somniferum HOM05D004981 ORTHO05D005635 3.1e-36 156.8 376 40.4
vmacro19928 Vaccinium macrocarpon HOM05D004981 ORTHO05D005635 1.7e-34 151.0 317 38.8
HPP92_013108 Vanilla planifolia HOM05D004981 ORTHO05D005635 2.3e-34 150.6 222 42.8
MD14G1166200 Malus domestica HOM05D004981 ORTHO05D005635 2.9e-34 150.2 371 42.6
Os09g0372400 Oryza sativa ssp. japonica HOM05D004981 ORTHO05D005635 6.6e-34 149.1 322 41.0
Nitab4.5_0000480g0020 Nicotiana tabacum HOM05D004981 ORTHO05D005635 1.1e-33 148.3 321 36.4
Zm00001eb311320 Zea mays HOM05D004981 ORTHO05D005635 1.5e-33 147.9 404 36.6
SEGI_39436 Sequoiadendron giganteum HOM05D004981 ORTHO05D005635 3.3e-33 146.7 324 38.0
Mapoly0041s0053 Marchantia polymorpha HOM05D004981 ORTHO05D005635 8.0e-32 142.1 401 37.7
Lj1g0016172 Lotus japonicus HOM05D004981 ORTHO05D005635 2.3e-31 140.6 316 37.0
Pp3c22_4170 Physcomitrium patens HOM05D004981 ORTHO05D005635 8.9e-31 138.7 388 37.1
AagrBONN_evm.TU.Sc2ySwM_117.1804 Anthoceros agrestis HOM05D004981 ORTHO05D005635 5.7e-30 136.0 230 43.5
AUR62013118 Chenopodium quinoa HOM05D004981 ORTHO05D005635 2.4e-28 130.6 337 34.4
SMO356G0631 Selaginella moellendorffii HOM05D004981 ORTHO05D005635 5.4e-28 129.4 331 40.2
C05p07220 Brassica napus HOM05D001624 ORTHO05D005635 1.0e-26 125.2 105 64.8
Ah.01g009580 Amaranthus hybridus HOM05D004981 ORTHO05D005635 1.2e-22 111.7 267 34.8
HPP92_013085 Vanilla planifolia HOM05D004981 ORTHO05D005635 3.2e-20 103.6 311 32.5
CBR_g31506 Chara braunii HOM05D004981 ORTHO05D005635 1.7e-18 97.8 240 35.8
FAN08G2142 Fragaria x ananassa HOM05D004981 ORTHO05D005635 5.6e-17 92.8 366 33.9
Thecc.06G050700 Theobroma cacao HOM05D004981 ORTHO05D005635 2.8e-16 90.5 88 50.0
VMungo1383G1991 Vigna mungo HOM05D004981 ORTHO05D005635 4.4e-14 83.2 138 43.5
BcaC05g24776 Brassica carinata HOM05D004981 ORTHO05D005635 2.9e-13 80.5 56 71.4
BolC7t41892H Brassica oleracea HOM05D004981 ORTHO05D042093 1.4e-12 78.2 85 62.4
BraA08t32917Z Brassica rapa HOM05D004981 ORTHO05D005635 6.0e-11 72.8 105 48.6
BolC5t29476H Brassica oleracea HOM05D004981 ORTHO05D005635 1.3e-10 71.6 49 71.4
RcHm_v2.0_Chr7g0224681 Rosa chinensis HOM05D004981 ORTHO05D005635 1.6e-08 64.7 113 42.5
FAN21G1455 Fragaria x ananassa HOM05D004981 ORTHO05D005635 6.2e-08 62.8 69 55.1
FvH4_4g13240 Fragaria vesca HOM05D004981 ORTHO05D005635 3.1e-07 60.5 107 41.1


User provided reference genes

Program Settings