Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 6.2e-82 307.4 151 100.0
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 3.9e-76 288.1 151 94.0
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 1.7e-71 272.7 151 88.1
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 7.1e-70 267.3 151 85.4
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 9.3e-70 266.9 151 86.1
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 7.3e-67 257.3 151 84.1
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 1.6e-66 256.1 151 83.4
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 4.8e-66 254.6 152 82.9
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 1.1e-62 243.4 151 79.5
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 1.2e-61 240.0 142 82.4
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 3.4e-56 221.9 153 72.5
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 8.4e-55 217.2 149 68.5
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 1.6e-53 213.0 149 65.1
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 2.1e-53 212.6 150 65.3
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 3.5e-53 211.8 149 67.1
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 7.9e-53 210.7 147 66.7
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 3.0e-52 208.8 147 68.7
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 3.9e-52 208.4 149 65.8
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 8.7e-52 207.2 149 65.8
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 1.9e-51 206.1 149 65.1
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 4.3e-51 204.9 149 64.4
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 9.6e-51 203.8 149 63.8
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 9.6e-51 203.8 150 66.7
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 1.3e-50 203.4 148 67.6
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 1.6e-50 203.0 147 63.3
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 2.1e-50 202.6 147 63.9
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.8e-50 202.2 150 64.0
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 2.8e-50 202.2 147 63.3
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 3.7e-50 201.8 148 64.2
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 4.8e-50 201.4 148 64.2
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 4.8e-50 201.4 152 65.8
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 6.2e-50 201.1 147 65.3
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 8.1e-50 200.7 147 62.6
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.1e-49 200.3 147 64.6
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 1.4e-49 199.9 147 63.3
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 2.4e-49 199.1 149 61.7
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 4.0e-49 198.4 148 62.8
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 5.3e-49 198.0 147 64.6
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 5.3e-49 198.0 148 64.2
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 5.3e-49 198.0 147 65.3
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 9.0e-49 197.2 140 64.3
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 1.5e-48 196.4 149 62.4
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 1.5e-48 196.4 149 61.7
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 2.0e-48 196.1 148 64.2
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.0e-48 196.1 147 63.9
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 2.6e-48 195.7 147 65.3
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 3.4e-48 195.3 147 61.9
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 4.5e-48 194.9 151 60.9
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 1.0e-47 193.7 150 60.7
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 1.7e-47 193.0 149 61.7
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 2.2e-47 192.6 139 67.6
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 2.9e-47 192.2 147 62.6
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 8.4e-47 190.7 151 60.9
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 1.4e-46 189.9 143 62.9
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 1.9e-46 189.5 150 60.0
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 2.5e-46 189.1 151 61.6
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 2.5e-46 189.1 144 59.7
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 3.2e-46 188.7 139 64.7
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 5.5e-46 188.0 148 57.4
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 1.2e-45 186.8 149 59.7
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 1.2e-45 186.8 151 59.6
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 3.5e-45 185.3 150 62.0
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 3.5e-45 185.3 150 60.0
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 7.9e-45 184.1 111 80.2
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 1.3e-44 183.3 178 52.2
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 3.9e-44 181.8 144 61.1
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 6.7e-44 181.0 198 48.0
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 2.5e-43 179.1 139 59.7
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 3.3e-43 178.7 138 60.9
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 4.3e-43 178.3 146 58.2
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 7.4e-43 177.6 145 60.0
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 7.4e-43 177.6 144 60.4
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 1.6e-42 176.4 143 57.3
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 2.1e-42 176.0 156 55.1
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 6.3e-42 174.5 128 65.6
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.1e-41 173.7 139 59.0
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 1.4e-41 173.3 148 56.8
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.0e-40 169.5 138 58.7
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 4.5e-40 168.3 152 55.3
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.7e-39 166.4 141 56.7
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 6.5e-39 164.5 138 54.3
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 8.5e-39 164.1 148 52.7
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 1.1e-38 163.7 148 53.4
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 1.3e-34 150.2 153 47.7
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 5.5e-30 134.8 128 49.2
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 2.7e-29 132.5 166 42.2
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 1.0e-23 114.0 64 81.2
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 2.2e-23 112.8 106 53.8
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 6.5e-23 111.3 149 39.6
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 3.2e-22 109.0 140 40.0
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.9e-14 83.2 71 59.2
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 4.2e-14 82.0 62 61.3
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.6e-13 80.1 83 43.4
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 1.8e-12 76.6 109 37.6
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 1.5e-11 73.6 76 47.4
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 9.7e-11 70.9 76 46.1
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 2.8e-10 69.3 64 53.1


User provided reference genes

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