Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 1.1e-49 200.3 159 100.0
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 2.8e-48 195.7 159 98.7
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 2.9e-45 185.7 159 94.3
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 1.7e-42 176.4 159 92.5
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 1.9e-41 172.9 159 88.1
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 1.1e-39 167.2 159 85.5
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 1.1e-39 167.2 159 85.5
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 1.4e-39 166.8 159 83.6
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 3.1e-39 165.6 159 84.9
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 4.0e-39 165.2 159 87.4
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 6.8e-39 164.5 157 89.8
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 8.9e-39 164.1 159 84.3
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 2.2e-37 159.5 160 83.8
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 5.6e-33 144.8 175 72.6
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 5.2e-23 111.7 147 71.4
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 1.5e-22 110.2 168 63.7
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.7e-21 106.7 165 66.1
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 2.2e-21 106.3 68 79.4
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 2.9e-21 105.9 88 81.8
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 4.9e-21 105.1 167 67.1
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 4.9e-21 105.1 163 63.8
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 4.9e-21 105.1 162 62.3
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 8.4e-21 104.4 166 60.8
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 8.4e-21 104.4 164 63.4
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 1.1e-20 104.0 88 81.8
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 1.1e-20 104.0 155 65.8
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 1.1e-20 104.0 92 78.3
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 1.4e-20 103.6 150 71.3
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 1.9e-20 103.2 168 59.5
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 2.4e-20 102.8 151 66.9
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 3.2e-20 102.4 152 67.8
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 3.2e-20 102.4 158 61.4
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 4.2e-20 102.1 164 62.8
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 4.2e-20 102.1 174 60.3
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 4.2e-20 102.1 92 78.3
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 4.2e-20 102.1 165 65.5
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 7.1e-20 101.3 161 63.4
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 7.1e-20 101.3 150 66.0
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 7.1e-20 101.3 161 62.1
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 9.3e-20 100.9 67 76.1
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 9.3e-20 100.9 161 64.0
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 9.3e-20 100.9 162 61.1
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 2.7e-19 99.4 168 60.7
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 3.5e-19 99.0 164 59.1
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 4.6e-19 98.6 167 61.7
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 7.8e-19 97.8 88 77.3
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 7.8e-19 97.8 88 77.3
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 7.8e-19 97.8 168 60.1
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 1.0e-18 97.4 164 62.8
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.0e-18 97.4 67 73.1
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 1.0e-18 97.4 64 73.4
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 1.3e-18 97.1 165 61.2
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 1.3e-18 97.1 89 77.5
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 1.3e-18 97.1 166 62.0
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 1.7e-18 96.7 152 64.5
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 1.7e-18 96.7 146 68.5
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 1.7e-18 96.7 92 77.2
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 2.3e-18 96.3 67 71.6
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 2.3e-18 96.3 89 73.0
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 2.3e-18 96.3 163 64.4
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 3.0e-18 95.9 67 71.6
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 3.0e-18 95.9 91 75.8
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 3.9e-18 95.5 67 71.6
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 3.9e-18 95.5 67 71.6
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 3.9e-18 95.5 158 60.1
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 5.1e-18 95.1 165 61.2
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 8.7e-18 94.4 164 60.4
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 8.7e-18 94.4 155 67.1
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 1.1e-17 94.0 161 64.0
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 1.1e-17 94.0 152 65.8
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 1.1e-17 94.0 125 71.2
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 1.1e-17 94.0 164 62.2
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 1.5e-17 93.6 165 60.6
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 1.5e-17 93.6 166 60.8
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 1.5e-17 93.6 169 60.9
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 2.5e-17 92.8 167 62.9
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 2.5e-17 92.8 68 72.1
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 2.5e-17 92.8 162 61.1
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 2.5e-17 92.8 165 60.0
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 2.5e-17 92.8 170 58.8
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 3.3e-17 92.4 166 60.2
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 3.3e-17 92.4 92 75.0
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 7.3e-17 91.3 67 67.2
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 9.6e-17 90.9 165 60.0
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 1.6e-16 90.1 164 61.6
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.6e-16 90.1 67 70.1
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 1.6e-16 90.1 67 70.1
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 1.6e-16 90.1 149 64.4
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 2.1e-16 89.7 161 60.9
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 4.8e-16 88.6 92 67.4
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 6.2e-16 88.2 150 64.0
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 6.2e-16 88.2 145 66.2
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 8.1e-16 87.8 87 73.6
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 1.1e-15 87.4 67 65.7
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 1.1e-15 87.4 88 76.1
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 2.4e-15 86.3 92 72.8
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 5.3e-15 85.1 60 70.0
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 5.3e-15 85.1 150 62.7
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 5.3e-15 85.1 87 73.6
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 9.0e-15 84.3 157 61.1
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 1.5e-14 83.6 92 69.6
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 4.9e-13 78.6 77 54.5
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 1.4e-12 77.0 90 68.9
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 1.4e-12 77.0 65 60.0
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 1.4e-12 77.0 88 68.2
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 2.1e-11 73.2 67 55.2
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 1.3e-08 63.9 90 43.3


User provided reference genes

Program Settings