Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 1.0e-54 216.5 108 100.0
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 2.5e-53 211.8 108 98.1
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 7.4e-53 210.3 108 97.2
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 1.3e-52 209.5 108 96.3
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 1.6e-52 209.1 108 96.3
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 2.8e-52 208.4 108 96.3
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 3.7e-52 208.0 108 95.4
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 6.2e-52 207.2 108 95.4
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 1.1e-51 206.5 108 94.4
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 1.4e-51 206.1 107 94.4
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 1.4e-51 206.1 107 94.4
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 1.4e-51 206.1 107 94.4
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 4.0e-51 204.5 107 93.5
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 9.9e-50 199.9 108 92.6
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 9.9e-50 199.9 108 90.7
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.7e-49 199.1 102 98.0
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 2.6e-42 175.3 105 81.0
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 7.6e-42 173.7 105 81.0
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 1.7e-41 172.6 105 79.0
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 2.2e-41 172.2 100 82.0
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 2.2e-41 172.2 108 76.9
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 3.8e-41 171.4 107 76.6
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 6.5e-41 170.6 108 76.9
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 6.5e-41 170.6 108 76.9
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 6.5e-41 170.6 108 76.9
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 8.4e-41 170.2 105 80.0
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 1.4e-40 169.5 105 78.1
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 1.4e-40 169.5 108 75.9
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 3.2e-40 168.3 105 78.1
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 5.5e-40 167.5 108 77.8
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 5.5e-40 167.5 108 75.9
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 7.1e-40 167.2 107 77.6
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 9.3e-40 166.8 102 80.4
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.2e-39 166.4 105 80.0
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 1.6e-39 166.0 106 77.4
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 1.6e-39 166.0 106 77.4
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 2.7e-39 165.2 103 76.7
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 3.5e-39 164.9 107 75.7
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 3.5e-39 164.9 108 72.2
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 6.0e-39 164.1 101 79.2
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 6.0e-39 164.1 103 74.8
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 7.9e-39 163.7 100 77.0
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.0e-38 163.3 108 74.1
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 1.8e-38 162.5 101 77.2
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 3.9e-38 161.4 105 75.2
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 6.7e-38 160.6 102 77.5
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 8.7e-38 160.2 100 79.0
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 8.7e-38 160.2 100 79.0
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 1.1e-37 159.8 103 74.8
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.1e-37 159.8 100 75.0
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.1e-37 159.8 100 78.0
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.1e-37 159.8 104 73.1
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 1.5e-37 159.5 97 75.3
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.9e-37 159.1 105 73.3
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 2.5e-37 158.7 101 76.2
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 3.3e-37 158.3 105 75.2
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 7.4e-37 157.1 97 76.3
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 9.7e-37 156.8 97 76.3
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 1.3e-36 156.4 106 75.5
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 1.6e-36 156.0 100 72.0
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 2.2e-36 155.6 102 79.4
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 2.2e-36 155.6 97 75.3
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 2.2e-36 155.6 101 67.3
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 2.2e-36 155.6 100 70.0
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 2.2e-36 155.6 91 80.2
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 2.8e-36 155.2 100 77.0
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 2.8e-36 155.2 100 71.0
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 8.2e-36 153.7 100 76.0
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 8.2e-36 153.7 100 76.0
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 8.2e-36 153.7 92 79.3
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 1.4e-35 152.9 100 77.0
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 1.4e-35 152.9 100 70.0
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 1.8e-35 152.5 99 72.7
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.8e-35 152.5 103 70.9
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 2.4e-35 152.1 101 68.3
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.4e-35 152.1 92 77.2
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 3.1e-35 151.8 96 71.9
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 3.1e-35 151.8 101 68.3
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 4.1e-35 151.4 106 66.0
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 5.3e-35 151.0 101 74.3
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 6.9e-35 150.6 98 71.4
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 9.0e-35 150.2 101 67.3
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 9.0e-35 150.2 101 67.3
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 9.0e-35 150.2 101 71.3
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 4.5e-34 147.9 99 68.7
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 7.6e-34 147.1 135 57.8
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.0e-33 146.7 101 74.3
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.0e-33 146.7 96 68.8
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 1.2e-31 139.8 79 87.3
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.7e-31 138.7 151 52.3
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 8.8e-30 133.7 81 79.0
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 1.9e-29 132.5 87 73.6
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 7.4e-29 130.6 100 64.0
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 8.2e-28 127.1 91 64.8
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 8.2e-28 127.1 86 69.8
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 3.1e-27 125.2 87 70.1
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 4.1e-27 124.8 86 72.1
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 6.9e-27 124.0 80 72.5
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.5e-26 122.9 90 63.3
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.3e-25 119.8 102 61.8
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 6.5e-25 117.5 58 96.6
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 4.2e-24 114.8 81 71.6
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 4.2e-24 114.8 88 62.5
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 5.5e-24 114.4 86 65.1
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.6e-23 112.8 77 74.0
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 4.7e-23 111.3 55 96.4
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 3.9e-22 108.2 85 63.5
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 1.1e-21 106.7 86 54.7
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 5.7e-21 104.4 95 54.7
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 2.2e-20 102.4 70 68.6
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 1.8e-19 99.4 74 63.5
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.8e-19 99.4 56 85.7
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 3.9e-14 81.6 56 71.4
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 8.2e-12 73.9 53 66.0
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.6e-07 58.5 53 56.6
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 4.7e-07 58.2 45 60.0


User provided reference genes

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