Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G18130 Arabidopsis lyrata HOM05D011375 ORTHO05D013410 0.0e+00 1183.3 618 100.0
AT5G07790 Arabidopsis thaliana HOM05D011375 ORTHO05D013410 1.1e-283 979.5 621 84.7
Carub.0006s0671 Capsella rubella HOM05D011375 ORTHO05D013410 4.3e-246 854.7 633 75.0
Sp6g35150 Schrenkiella parvula HOM05D011375 ORTHO05D013410 2.0e-187 659.8 637 63.4
CARHR205390 Cardamine hirsuta HOM05D011375 ORTHO05D013410 1.5e-171 607.1 633 61.3
Aa31LG3G18680 Aethionema arabicum HOM05D011375 ORTHO05D013410 1.4e-127 461.1 657 51.0
Thhalv10015619m.g Eutrema salsugineum HOM05D011375 ORTHO05D013410 4.6e-123 446.0 523 56.4
C03p03880 Brassica napus HOM05D011375 ORTHO05D013410 3.4e-118 429.9 632 50.9
BolC3t12926H Brassica oleracea HOM05D011375 ORTHO05D013410 3.7e-117 426.4 632 50.8
A03p03460 Brassica napus HOM05D011375 ORTHO05D013410 3.0e-114 416.8 630 50.6
BraA03t09696Z Brassica rapa HOM05D011375 ORTHO05D013410 4.3e-105 386.3 638 48.4
AT5G61300 Arabidopsis thaliana HOM05D011375 ORTHO05D013410 1.3e-69 268.5 643 39.0
Carub.0008s2198 Capsella rubella HOM05D011375 ORTHO05D013410 6.3e-64 249.6 656 36.3
AL8G37960 Arabidopsis lyrata HOM05D011375 ORTHO05D013410 1.2e-62 245.4 649 36.7
THA.LOC104801405 Tarenaya hassleriana HOM05D011375 ORTHO05D013410 3.4e-62 243.8 697 34.6
Thhalv10003964m.g Eutrema salsugineum HOM05D011375 ORTHO05D013410 7.7e-62 242.7 626 37.1
CARHR275060 Cardamine hirsuta HOM05D011375 ORTHO05D013410 3.4e-33 147.5 638 30.4
Manes.06G088300 Manihot esculenta HOM05D001536 ORTHO05D001442 1.1e-12 79.3 777 25.1
Ah.11g048120 Amaranthus hybridus HOM05D001536 ORTHO05D001442 1.6e-11 75.5 650 24.6
CANSAT50G0006 Cannabis sativa HOM05D001536 ORTHO05D001442 1.8e-10 72.0 244 27.5
Duzib068G0802 Durio zibethinus HOM05D001536 ORTHO05D001442 4.0e-10 70.9 253 27.7
Gohir.D03G095100 Gossypium hirsutum HOM05D001536 ORTHO05D001442 2.6e-09 68.2 249 29.3
Gorai.003G099300 Gossypium raimondii HOM05D001536 ORTHO05D001442 5.8e-09 67.0 247 29.1
EL10Ac5g11082 Beta vulgaris HOM05D001536 ORTHO05D001442 1.3e-08 65.9 712 25.3
Glyma.04G165100 Glycine max HOM05D001536 ORTHO05D001442 1.7e-08 65.5 201 27.4
Duzib205G0516 Durio zibethinus HOM05D001536 ORTHO05D001442 2.9e-08 64.7 240 26.7
Gohir.A03G068500 Gossypium hirsutum HOM05D001536 ORTHO05D001442 2.9e-08 64.7 246 28.0
Thecc.03G095800 Theobroma cacao HOM05D001536 ORTHO05D001442 2.9e-08 64.7 127 39.4
COL.COLO4_38302 Corchorus olitorius HOM05D001536 ORTHO05D001442 3.7e-08 64.3 161 34.8
Manes.14G082800 Manihot esculenta HOM05D001536 ORTHO05D001442 6.4e-08 63.5 285 27.0
VMungo1309G1429 Vigna mungo HOM05D001536 ORTHO05D001442 1.1e-07 62.8 211 28.4
Dinv10677 Davidia involucrata HOM05D001536 ORTHO05D001442 1.4e-07 62.4 180 30.6
Hund05858 Selenicereus undatus HOM05D001536 ORTHO05D001442 1.4e-07 62.4 204 29.9
Atru.chr9.313 Acer truncatum HOM05D001536 ORTHO05D001442 2.4e-07 61.6 238 30.3
HanXRQChr17g0545441 Helianthus annuus HOM05D001536 ORTHO05D001442 2.4e-07 61.6 190 28.4
Sed0018687 Sechium edule HOM05D001536 ORTHO05D001442 2.4e-07 61.6 177 31.1
SGA_v2.0_scaffold36G14432 Striga asiatica HOM05D001536 ORTHO05D001442 2.4e-07 61.6 183 29.0
Phvul.009G184400 Phaseolus vulgaris HOM05D001536 ORTHO05D001442 4.1e-07 60.8 216 29.6
DCAR_025403 Daucus carota HOM05D001536 ORTHO05D001442 5.4e-07 60.5 246 31.7
ECA233G2264 Erigeron canadensis HOM05D001536 ORTHO05D001442 7.0e-07 60.1 196 28.6
Peaxi162Scf00274g00008 Petunia axillaris HOM05D001536 ORTHO05D001442 9.2e-07 59.7 470 25.1
Lsat_1_v5_gn_3_56361 Lactuca sativa HOM05D001536 ORTHO05D001442 1.2e-06 59.3 241 26.1
SHI27316 Sapria himalayana HOM05D001536 ORTHO05D001442 1.6e-06 58.9 68 45.6
CARHR062240 Cardamine hirsuta HOM05D001536 ORTHO05D001442 2.0e-06 58.5 233 28.3
Dinv38761 Davidia involucrata HOM05D001536 ORTHO05D001442 2.7e-06 58.2 215 31.2
Hma1.2p1_0354F.1_g133660 Hydrangea macrophylla HOM05D001536 ORTHO05D001442 2.7e-06 58.2 222 29.7
Migut.L01226 Erythranthe guttata HOM05D001536 ORTHO05D001442 3.5e-06 57.8 198 31.3
Thhalv10018101m.g Eutrema salsugineum HOM05D001536 ORTHO05D001442 4.6e-06 57.4 226 28.8
Carub.0002s1596 Capsella rubella HOM05D001536 ORTHO05D001442 6.0e-06 57.0 227 30.4
Cpa.g.sc13.308 Carica papaya HOM05D001536 ORTHO05D001442 6.0e-06 57.0 696 23.1
FAN13G1067 Fragaria x ananassa HOM05D001536 ORTHO05D001442 6.0e-06 57.0 224 28.1
Sc11g0002250 Simmondsia chinensis HOM05D001536 ORTHO05D001442 6.0e-06 57.0 213 27.2
Actinidia09237 Actinidia chinensis HOM05D000001 ORTHO05D000003 7.8e-06 56.6 164 29.3
Aqoxy3G03549 Aquilegia oxysepala HOM05D001536 ORTHO05D001442 7.8e-06 56.6 316 27.2
Ciclev10018667m.g Citrus clementina HOM05D001536 ORTHO05D001442 7.8e-06 56.6 223 28.7


User provided reference genes

Program Settings