Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 1.6e-277 958.7 459 100.0
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 2.2e-276 954.9 459 99.6
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 2.5e-275 951.4 459 98.9
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 3.6e-274 947.6 459 98.3
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 2.8e-271 937.9 459 97.6
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 3.7e-271 937.6 459 95.2
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 3.7e-271 937.6 459 95.2
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 2.4e-270 934.9 459 95.0
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 7.0e-270 933.3 459 94.8
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 9.1e-270 932.9 459 96.9
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 2.1e-266 921.8 486 90.9
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 3.6e-258 894.4 460 88.9
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 2.6e-248 861.7 459 85.6
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 1.4e-246 855.9 459 85.4
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 3.2e-246 854.7 459 84.7
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.9e-243 845.5 459 84.1
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.6e-243 844.0 459 83.7
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 7.3e-243 843.6 459 83.0
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 6.2e-242 840.5 459 82.4
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 5.2e-241 837.4 475 80.8
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 7.5e-240 833.6 461 82.4
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 8.3e-239 830.1 460 82.0
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 1.4e-238 829.3 459 81.9
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 1.9e-238 828.9 460 82.8
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 1.9e-238 828.9 461 82.9
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 2.4e-238 828.6 459 82.1
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 7.1e-238 827.0 460 81.7
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.6e-237 825.9 459 81.7
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.7e-237 825.1 461 82.6
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 6.0e-237 823.9 459 81.5
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.9e-236 821.2 461 82.4
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 5.1e-236 820.8 459 80.8
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 6.6e-236 820.5 459 80.4
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 6.6e-236 820.5 459 80.8
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 8.6e-236 820.1 459 80.6
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 2.5e-235 818.5 459 80.4
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 3.3e-235 818.1 461 81.3
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 4.3e-235 817.8 459 82.4
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.2e-234 816.2 459 80.4
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 2.1e-234 815.5 460 80.9
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 8.1e-234 813.5 460 81.3
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 8.1e-234 813.5 460 81.3
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 1.1e-233 813.1 459 80.6
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.4e-233 812.8 459 80.4
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 1.4e-233 812.8 461 80.7
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 1.8e-233 812.4 459 80.4
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 6.8e-233 810.4 460 78.9
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 8.9e-233 810.1 481 77.8
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 8.9e-233 810.1 460 81.3
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 4.9e-231 804.3 460 79.6
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 4.9e-231 804.3 459 81.0
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 6.4e-231 803.9 460 80.4
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 6.4e-231 803.9 461 78.7
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 6.4e-231 803.9 459 80.2
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 1.4e-230 802.7 459 80.0
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.9e-230 802.4 459 79.5
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 3.2e-230 801.6 460 79.1
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 2.1e-229 798.9 458 79.3
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 7.8e-229 797.0 460 78.9
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.3e-228 796.2 461 79.0
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.1e-227 793.1 460 78.3
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.9e-227 792.3 459 79.3
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 9.6e-227 790.0 460 78.0
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 2.8e-226 788.5 460 77.8
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 4.7e-226 787.7 460 79.1
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 4.0e-225 784.6 459 80.0
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 5.8e-224 780.8 459 77.8
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 4.2e-222 774.6 455 77.8
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.2e-221 773.1 462 76.2
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 1.6e-221 772.7 460 76.5
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 3.9e-220 768.1 443 78.1
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.3e-218 763.1 460 78.0
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 2.1e-218 762.3 497 72.0
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 6.2e-218 760.8 460 78.0
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.0e-216 755.7 459 77.3
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 3.4e-216 755.0 459 75.2
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 3.4e-216 755.0 458 75.1
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.3e-215 753.1 459 76.0
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 1.6e-213 746.1 459 75.2
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 2.0e-208 729.2 464 73.3
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.6e-205 719.5 460 72.8
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 3.9e-204 714.9 460 70.9
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 2.2e-199 699.1 498 67.1
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 6.5e-199 697.6 459 70.8
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 6.3e-186 654.4 454 67.6
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 3.8e-183 645.2 458 67.0
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 1.2e-181 640.2 393 74.0
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.1e-181 639.4 450 64.0
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.1e-179 633.6 450 64.2
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.8e-178 629.0 456 65.1
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 2.9e-175 619.0 340 82.9
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 5.0e-175 618.2 462 62.6
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.9e-174 616.3 338 83.1
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.2e-174 614.4 338 83.1
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 7.9e-173 610.9 338 83.1
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.4e-169 600.1 338 82.2
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 2.6e-168 595.9 341 80.6
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 2.6e-168 595.9 341 80.6
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.6e-165 586.6 338 81.4
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 2.8e-162 575.9 323 81.4
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 4.8e-162 575.1 461 58.4
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.8e-161 573.2 337 78.0
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 4.5e-160 568.5 337 79.8
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.9e-159 565.8 320 81.2
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.5e-147 524.6 290 82.4
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 4.9e-146 521.9 304 81.6
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 3.8e-143 512.3 337 75.1
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.5e-142 510.4 308 80.2
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 7.5e-139 498.0 291 78.4
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 2.8e-133 479.6 338 65.4
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 8.0e-133 478.0 277 78.0
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 5.2e-124 448.7 281 73.7
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 7.8e-104 381.7 449 41.0
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 2.9e-90 336.7 486 35.8
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 5.3e-68 262.7 164 71.3
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 5.3e-52 209.5 163 60.1
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.2e-50 204.1 110 85.5
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.2e-50 204.1 110 85.5
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.0e-50 203.0 110 84.5
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.5e-38 164.9 98 77.6
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.1e-15 89.0 40 100.0


User provided reference genes

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