Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 9.7e-116 420.2 223 100.0
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 6.7e-109 397.5 221 95.9
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 2.1e-102 375.9 221 90.5
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 4.4e-100 368.2 221 90.0
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 9.7e-100 367.1 221 90.5
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 5.0e-96 354.8 221 87.3
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 6.5e-96 354.4 222 86.9
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 8.5e-96 354.0 222 86.5
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 1.5e-95 353.2 222 86.5
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 7.2e-95 350.9 222 86.5
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 3.8e-88 328.6 224 79.0
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 9.4e-87 323.9 221 78.7
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 9.8e-76 287.3 220 68.2
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 8.3e-75 284.3 220 70.0
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.8e-74 283.1 220 70.0
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 2.4e-74 282.7 218 69.3
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 5.4e-74 281.6 220 69.5
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 3.5e-73 278.9 220 66.8
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 3.5e-73 278.9 220 68.2
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 1.0e-72 277.3 220 67.7
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 8.6e-72 274.2 220 65.5
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 1.5e-71 273.5 220 66.4
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 2.5e-71 272.7 218 65.6
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 7.3e-71 271.2 220 65.5
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 2.1e-70 269.6 234 63.7
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 6.1e-70 268.1 164 86.6
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 4.0e-69 265.4 218 64.7
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 6.8e-69 264.6 218 64.2
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 3.4e-68 262.3 217 63.6
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 3.4e-68 262.3 217 63.1
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 4.4e-68 261.9 217 63.6
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 7.5e-68 261.2 165 78.2
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 7.5e-68 261.2 183 72.1
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 9.8e-68 260.8 225 64.9
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 1.7e-67 260.0 241 60.2
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 2.2e-67 259.6 209 65.1
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 2.9e-67 259.2 220 64.5
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 2.9e-67 259.2 228 61.8
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 3.7e-67 258.8 219 63.5
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 3.7e-67 258.8 219 62.6
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 1.1e-66 257.3 219 62.6
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 1.1e-66 257.3 219 62.1
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 1.4e-66 256.9 219 63.5
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 9.2e-66 254.2 220 60.5
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 1.6e-65 253.4 217 60.8
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.6e-65 253.4 203 65.0
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 2.0e-65 253.1 217 62.2
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 3.5e-65 252.3 247 56.7
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 7.8e-65 251.1 228 62.3
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 2.3e-64 249.6 221 62.4
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 3.9e-64 248.8 217 60.4
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 8.6e-64 247.7 221 60.2
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 4.3e-63 245.4 227 58.6
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 4.3e-63 245.4 219 60.7
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 5.6e-63 245.0 219 59.8
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 7.3e-63 244.6 220 60.0
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 7.3e-63 244.6 222 58.1
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 1.2e-62 243.8 175 69.1
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.6e-62 243.4 156 78.8
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 1.6e-62 243.4 220 61.4
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 2.1e-62 243.0 221 59.7
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 4.7e-62 241.9 156 78.2
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 1.0e-61 240.7 156 76.9
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 1.0e-61 240.7 219 58.4
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 1.4e-61 240.4 220 59.1
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 2.3e-61 239.6 179 68.2
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 4.0e-61 238.8 220 60.9
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 5.2e-61 238.4 169 74.0
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 6.8e-61 238.0 297 49.8
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 1.5e-60 236.9 210 61.9
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 1.5e-60 236.9 176 67.6
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 5.8e-60 235.0 176 67.0
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 9.8e-60 234.2 223 57.4
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 1.7e-59 233.4 216 57.4
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 6.4e-59 231.5 179 65.4
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 8.3e-59 231.1 186 62.9
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 1.1e-58 230.7 181 63.5
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 2.4e-58 229.6 186 62.4
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 4.6e-57 225.3 151 73.5
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.0e-56 224.2 153 73.2
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 1.3e-56 223.8 181 62.4
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 3.0e-56 222.6 216 55.6
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 3.9e-56 222.2 179 64.2
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.9e-55 219.9 153 71.9
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 4.3e-55 218.8 146 76.0
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.2e-54 217.2 225 56.0
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 4.7e-54 215.3 153 69.9
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 1.8e-53 213.4 220 55.9
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 3.1e-53 212.6 190 59.5
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 5.8e-52 208.4 149 68.5
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 5.8e-52 208.4 158 64.6
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 5.8e-52 208.4 146 69.9
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 1.3e-51 207.2 184 59.8
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.5e-49 199.1 147 66.7
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 1.1e-47 194.1 155 62.6
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.9e-47 193.4 221 52.0
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 2.2e-43 179.9 174 52.9
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 2.9e-43 179.5 183 55.7
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 6.4e-43 178.3 122 73.8
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 4.1e-42 175.6 147 59.9
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 3.5e-41 172.6 88 98.9
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 8.6e-40 167.9 219 49.3
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 4.4e-36 155.6 203 43.3
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 6.0e-33 145.2 143 59.4
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 1.1e-31 141.0 175 45.7
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 9.6e-31 137.9 86 76.7
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 6.2e-30 135.2 79 79.7
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 2.6e-28 129.8 180 42.2
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 7.6e-28 128.3 137 53.3
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 1.4e-26 124.0 129 54.3
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 3.2e-26 122.9 67 89.6
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 3.3e-23 112.8 170 41.2
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.3e-22 110.9 72 75.0
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 9.3e-18 94.7 238 29.4
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 2.1e-17 93.6 80 61.2
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 1.9e-15 87.0 72 65.3
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 2.1e-14 83.6 59 71.2
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 6.5e-11 72.0 107 45.8
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 5.5e-10 68.9 108 37.0
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 1.6e-09 67.4 64 50.0
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 3.5e-09 66.2 83 54.2
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 7.9e-09 65.1 56 60.7


User provided reference genes

Program Settings