Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 4.1e-107 391.3 190 100.0
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 3.3e-96 355.1 195 88.2
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 7.2e-96 354.0 179 95.5
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 2.3e-94 349.0 192 88.5
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 2.3e-89 332.4 192 84.9
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 6.6e-89 330.9 192 84.4
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 1.1e-88 330.1 179 88.8
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 1.9e-88 329.3 192 82.3
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 2.5e-88 328.9 190 84.7
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 2.5e-88 328.9 190 84.7
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 1.2e-87 326.6 196 81.6
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 1.2e-87 326.6 196 81.6
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 2.8e-87 325.5 179 87.7
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 3.6e-87 325.1 200 81.5
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 6.1e-87 324.3 197 82.2
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 3.1e-86 322.0 196 81.1
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 8.9e-86 320.5 192 80.7
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 7.8e-82 307.4 191 76.4
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 3.4e-69 265.4 188 67.6
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 7.6e-69 264.2 180 68.9
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 7.6e-69 264.2 172 73.8
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 1.7e-68 263.1 174 71.3
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 6.4e-68 261.2 180 70.6
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 1.1e-67 260.4 181 69.1
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 2.4e-67 259.2 183 66.7
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 7.1e-67 257.7 187 66.3
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 9.2e-67 257.3 172 72.7
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 9.2e-67 257.3 187 67.4
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 2.1e-66 256.1 183 65.6
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 1.0e-65 253.8 173 70.5
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 1.0e-65 253.8 186 67.2
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 1.7e-65 253.1 173 70.5
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 1.7e-65 253.1 175 68.6
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 3.9e-65 251.9 174 68.4
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 3.9e-65 251.9 183 66.7
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 8.6e-65 250.8 175 69.1
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 8.6e-65 250.8 176 68.8
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 1.1e-64 250.4 178 68.0
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 1.5e-64 250.0 183 65.0
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 1.9e-64 249.6 178 65.7
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 2.5e-64 249.2 175 66.9
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 3.3e-64 248.8 178 68.0
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 4.3e-64 248.4 178 65.7
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 4.3e-64 248.4 173 68.2
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 7.3e-64 247.7 175 65.1
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 7.3e-64 247.7 182 63.7
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.6e-63 246.5 173 66.5
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 3.6e-63 245.4 178 66.9
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 4.7e-63 245.0 163 69.3
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 6.2e-63 244.6 177 67.8
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 8.1e-63 244.2 174 67.8
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 1.4e-62 243.4 219 56.6
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.4e-62 243.4 186 64.5
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 4.0e-62 241.9 160 70.6
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 4.0e-62 241.9 182 64.3
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 5.2e-62 241.5 186 63.4
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 6.8e-62 241.1 177 64.4
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 1.5e-61 240.0 176 63.6
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 1.5e-61 240.0 176 67.0
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 2.0e-61 239.6 186 62.9
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 2.6e-61 239.2 151 74.2
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 3.4e-61 238.8 193 61.7
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 4.4e-61 238.4 167 65.3
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 5.8e-61 238.0 167 64.7
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 5.8e-61 238.0 186 61.3
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 7.6e-61 237.7 171 66.7
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 2.2e-60 236.1 169 66.3
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 2.2e-60 236.1 159 68.6
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 2.9e-60 235.7 176 64.2
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 6.4e-60 234.6 166 68.1
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 1.1e-59 233.8 160 67.5
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 1.4e-59 233.4 171 64.9
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 1.9e-59 233.0 160 68.8
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 1.9e-59 233.0 151 72.2
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 1.9e-59 233.0 192 56.2
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 1.2e-58 230.3 154 66.9
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 1.6e-58 229.9 174 63.8
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 4.6e-58 228.4 160 65.6
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 8.7e-57 224.2 156 66.0
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 1.5e-56 223.4 183 61.2
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 6.2e-55 218.0 164 64.0
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 1.4e-54 216.9 174 59.8
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 6.9e-54 214.5 251 49.0
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 4.4e-53 211.8 187 57.8
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 8.4e-52 207.6 137 71.5
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 1.1e-51 207.2 137 70.8
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 3.2e-51 205.7 149 69.1
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 2.7e-50 202.6 166 61.4
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 5.1e-49 198.4 166 59.6
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 2.5e-48 196.1 210 55.2
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.8e-47 192.6 161 54.7
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 5.3e-46 188.3 175 56.6
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 9.0e-46 187.6 142 65.5
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 3.4e-45 185.7 131 67.2
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 4.5e-45 185.3 156 58.3
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 5.8e-45 184.9 150 61.3
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.7e-44 183.3 146 60.3
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 2.2e-44 183.0 115 73.9
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 8.7e-41 171.0 118 67.8
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 9.6e-40 167.5 152 57.9
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 7.1e-35 151.4 117 62.4
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 2.6e-29 132.9 82 70.7
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 7.6e-29 131.3 80 78.8
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 6.5e-20 101.7 156 37.8
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.8e-17 93.6 108 47.2
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 3.8e-12 75.9 44 72.7
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 3.2e-11 72.8 85 49.4
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 5.1e-09 65.5 45 64.4
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 3.1e-06 56.2 41 61.0


User provided reference genes

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