Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G14340 Arabidopsis lyrata HOM05D000730 ORTHO05D000578 1.1e-88 330.1 192 100.0
AL6G17130 Arabidopsis lyrata HOM05D000730 ORTHO05D000578 5.9e-45 184.9 170 65.9
AT5G06970 Arabidopsis thaliana HOM05D000730 ORTHO05D000578 1.3e-44 183.7 170 65.3
CARHR206170 Cardamine hirsuta HOM05D000730 ORTHO05D000578 6.5e-44 181.4 168 64.9
Carub.0006s0590 Capsella rubella HOM05D000730 ORTHO05D000578 1.4e-43 180.3 175 62.3
Sp6g35900 Schrenkiella parvula HOM05D000730 ORTHO05D000578 1.4e-43 180.3 175 62.9
BcaC06g32528 Brassica carinata HOM05D000730 ORTHO05D000578 2.5e-43 179.5 175 62.9
Thhalv10012512m.g Eutrema salsugineum HOM05D000730 ORTHO05D000578 7.2e-43 177.9 170 62.9
A10p28770 Brassica napus HOM05D000730 ORTHO05D000578 2.1e-42 176.4 175 61.7
BcaNung04208 Brassica carinata HOM05D000730 ORTHO05D000578 1.8e-41 173.3 175 61.1
Aa31sc24G200 Aethionema arabicum HOM05D000730 ORTHO05D000578 3.0e-41 172.6 170 61.8
BraA10t44924Z Brassica rapa HOM05D000730 ORTHO05D000578 3.3e-40 169.1 183 59.0
C09p69110 Brassica napus HOM05D000730 ORTHO05D000578 4.4e-40 168.7 170 60.6
BolC9t59655H Brassica oleracea HOM05D000730 ORTHO05D000578 4.4e-40 168.7 170 60.6
THA.LOC104799323 Tarenaya hassleriana HOM05D000730 ORTHO05D000578 4.8e-39 165.2 170 61.8
BcaB05g25314 Brassica carinata HOM05D000730 ORTHO05D000578 4.1e-38 162.2 164 61.6
Cpa.g.sc169.47 Carica papaya HOM05D000730 ORTHO05D000578 5.9e-37 158.3 170 55.3
Thecc.10G145500 Theobroma cacao HOM05D000730 ORTHO05D000578 5.5e-35 151.8 174 54.0
BcaB05g25310 Brassica carinata HOM05D000730 ORTHO05D000578 1.2e-34 150.6 158 60.8
COL.COLO4_20721 Corchorus olitorius HOM05D000730 ORTHO05D000578 1.6e-34 150.2 174 54.0
Gohir.A05G283200 Gossypium hirsutum HOM05D000730 ORTHO05D000578 2.7e-34 149.4 174 52.3
Haze_03002 Corylus avellana HOM05D000730 ORTHO05D000578 3.6e-34 149.1 176 52.3
Gorai.009G298800 Gossypium raimondii HOM05D000730 ORTHO05D000578 4.7e-34 148.7 174 52.3
Duzib128G1742 Durio zibethinus HOM05D000730 ORTHO05D000578 1.0e-33 147.5 174 52.3
CSS0025631 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D000578 2.3e-33 146.4 176 50.6
Lsat_1_v5_gn_7_31081 Lactuca sativa HOM05D000730 ORTHO05D000578 3.0e-33 146.0 175 54.3
Gohir.D05G284200 Gossypium hirsutum HOM05D000730 ORTHO05D000578 4.0e-33 145.6 174 51.7
CANSAT56G2780 Cannabis sativa HOM05D000730 ORTHO05D000578 6.7e-33 144.8 171 53.2
CiPaw.13G015400 Carya illinoinensis HOM05D000730 ORTHO05D000578 8.8e-33 144.4 176 51.7
GSVIVG01036645001 Vitis vinifera HOM05D000730 ORTHO05D000578 8.8e-33 144.4 171 52.0
Potri.001G030100 Populus trichocarpa HOM05D000730 ORTHO05D000578 2.0e-32 143.3 176 51.1
DCAR_006604 Daucus carota HOM05D000730 ORTHO05D000578 3.3e-32 142.5 170 54.1
Manes.04G156900 Manihot esculenta HOM05D000730 ORTHO05D000578 3.3e-32 142.5 175 50.3
SGA_v2.0_scaffold124G33604 Striga asiatica HOM05D000730 ORTHO05D000578 3.3e-32 142.5 170 52.9
Aqoxy2G00416 Aquilegia oxysepala HOM05D000730 ORTHO05D000578 4.4e-32 142.1 176 50.6
Sc10g0004540 Simmondsia chinensis HOM05D000730 ORTHO05D000578 4.4e-32 142.1 176 51.1
TWI60G0879 Tripterygium wilfordii HOM05D000730 ORTHO05D000578 4.4e-32 142.1 171 51.5
Ciclev10003518m.g Citrus clementina HOM05D000730 ORTHO05D000578 7.5e-32 141.4 171 51.5
Rhsim07G0068600 Rhododendron simsii HOM05D000730 ORTHO05D000578 7.5e-32 141.4 176 50.0
Actinidia06224 Actinidia chinensis HOM05D000730 ORTHO05D000578 9.7e-32 141.0 179 49.7
vmacro07437 Vaccinium macrocarpon HOM05D000730 ORTHO05D000578 9.7e-32 141.0 176 50.6
Eucgr.J00067 Eucalyptus grandis HOM05D000730 ORTHO05D000578 3.7e-31 139.0 171 51.5
PSO384G0089 Papaver somniferum HOM05D000730 ORTHO05D000578 3.7e-31 139.0 170 50.0
Peaxi162Scf00082g00018 Petunia axillaris HOM05D000730 ORTHO05D000578 4.8e-31 138.7 174 50.0
Solyc01g096540.4 Solanum lycopersicum HOM05D000730 ORTHO05D000578 4.8e-31 138.7 174 50.0
Sopen01g040270 Solanum pennellii HOM05D000730 ORTHO05D000578 4.8e-31 138.7 174 50.0
Prupe.2G042100 Prunus persica HOM05D000730 ORTHO05D000578 6.3e-31 138.3 171 50.3
Atru.chr12.1287 Acer truncatum HOM05D000730 ORTHO05D000578 8.2e-31 137.9 171 50.3
ATR1096G139 Amborella trichopoda HOM05D000730 ORTHO05D000578 1.4e-30 137.1 169 49.1
CAN.G134.13 Capsicum annuum HOM05D000730 ORTHO05D000578 1.4e-30 137.1 174 48.9
Nn7g36786 Nelumbo nucifera HOM05D000730 ORTHO05D000578 1.4e-30 137.1 171 49.1
PSO339G1614 Papaver somniferum HOM05D000730 ORTHO05D000578 1.4e-30 137.1 170 50.0
arahy.Tifrunner.gnm1.ann1.8I68MQ Arachis hypogaea HOM05D000730 ORTHO05D000578 1.8e-30 136.7 176 48.9
arahy.Tifrunner.gnm1.ann1.H567TY Arachis hypogaea HOM05D000730 ORTHO05D000578 1.8e-30 136.7 176 48.9
FvH4_7g03630 Fragaria vesca HOM05D000730 ORTHO05D000578 1.8e-30 136.7 176 49.4
FAN06G3967 Fragaria x ananassa HOM05D000730 ORTHO05D000578 1.8e-30 136.7 176 49.4
Glyma.15G230600 Glycine max HOM05D000730 ORTHO05D000578 1.8e-30 136.7 174 48.9
RcHm_v2.0_Chr1g0326411 Rosa chinensis HOM05D000730 ORTHO05D000578 1.8e-30 136.7 176 49.4
Sed0013589 Sechium edule HOM05D000730 ORTHO05D000578 1.8e-30 136.7 176 50.0
Cc00_g07550 Coffea canephora HOM05D000730 ORTHO05D000578 2.4e-30 136.3 171 49.1
FAN10G2667 Fragaria x ananassa HOM05D000730 ORTHO05D000578 2.4e-30 136.3 176 48.9
Lalb_Chr19g0132961 Lupinus albus HOM05D000730 ORTHO05D000578 4.1e-30 135.6 176 48.3
Glyma.13G192900 Glycine max HOM05D000730 ORTHO05D000578 5.3e-30 135.2 174 48.9
VMungo1127G0979 Vigna mungo HOM05D000730 ORTHO05D000578 5.3e-30 135.2 174 48.9
Ca_23976_v3 Cicer arietinum L. HOM05D000730 ORTHO05D000578 7.0e-30 134.8 176 48.3
Phvul.011G201400 Phaseolus vulgaris HOM05D000730 ORTHO05D000578 9.1e-30 134.4 174 48.3
TPR.G8523 Trifolium pratense HOM05D000730 ORTHO05D000578 1.2e-29 134.0 177 47.5
ECA236G3986 Erigeron canadensis HOM05D000730 ORTHO05D000578 2.0e-29 133.3 175 51.4
Lj3g0012169 Lotus japonicus HOM05D000730 ORTHO05D000578 2.0e-29 133.3 176 48.3
PGR044G0565 Punica granatum HOM05D000730 ORTHO05D000578 2.7e-29 132.9 178 47.8
AUR62031742 Chenopodium quinoa HOM05D000730 ORTHO05D000578 4.5e-29 132.1 175 53.7
AUR62032627 Chenopodium quinoa HOM05D000730 ORTHO05D000578 7.7e-29 131.3 177 52.0
MELO3C012490.2 Cucumis melo HOM05D000730 ORTHO05D000578 7.7e-29 131.3 176 47.7
CsaV3_5G036910 Cucumis sativus L. HOM05D000730 ORTHO05D000578 7.7e-29 131.3 176 47.7
Duzib114G0880 Durio zibethinus HOM05D000730 ORTHO05D000578 1.0e-28 131.0 196 45.9
Medtr8g040190 Medicago truncatula HOM05D000730 ORTHO05D000578 1.0e-28 131.0 177 46.3
Psat4g145160 Pisum sativum HOM05D000730 ORTHO05D000578 1.0e-28 131.0 177 46.3
ClCG05G026970 Citrullus lanatus HOM05D000730 ORTHO05D000578 1.3e-28 130.6 176 47.7
MD07G1046600 Malus domestica HOM05D000730 ORTHO05D000578 1.3e-28 130.6 176 47.2
HanXRQChr04g0119551 Helianthus annuus HOM05D000730 ORTHO05D000578 1.7e-28 130.2 174 50.0
Zm00001eb285140 Zea mays HOM05D000730 ORTHO05D000578 1.7e-28 130.2 171 48.0
EL10Ac2g02767 Beta vulgaris HOM05D000730 ORTHO05D000578 2.9e-28 129.4 175 52.0
MD02G1278500 Malus domestica HOM05D000730 ORTHO05D000578 2.9e-28 129.4 176 47.2
Oeu064135.2 Olea europaea HOM05D000730 ORTHO05D000578 2.9e-28 129.4 169 50.3
FAN03G3014 Fragaria x ananassa HOM05D000730 ORTHO05D000578 3.8e-28 129.0 167 49.1
Nitab4.5_0002838g0080 Nicotiana tabacum HOM05D000730 ORTHO05D000578 3.8e-28 129.0 174 49.4
Nitab4.5_0005420g0020 Nicotiana tabacum HOM05D000730 ORTHO05D000578 5.0e-28 128.6 174 49.4
Migut.B01242 Erythranthe guttata HOM05D000730 ORTHO05D000578 5.5e-27 125.2 171 49.7
Lalb_Chr03g0032161 Lupinus albus HOM05D000730 ORTHO05D000578 9.4e-27 124.4 175 46.3
SalBow5G1057 Salvia bowleyana HOM05D000730 ORTHO05D000578 9.4e-27 124.4 194 43.8
Ah.10g030070 Amaranthus hybridus HOM05D000730 ORTHO05D000578 3.6e-26 122.5 167 47.3
MBI19_g36134_MAGBIO Magnolia biondii HOM05D000730 ORTHO05D000578 2.8e-23 112.8 171 46.2
HPP92_021195 Vanilla planifolia HOM05D000730 ORTHO05D000578 4.5e-21 105.5 175 43.4
Sabra01G0021600 Salix brachista HOM05D000730 ORTHO05D000578 5.9e-21 105.1 208 39.4
Dinv44710 Davidia involucrata HOM05D000730 ORTHO05D000578 7.7e-21 104.8 148 50.7
Hund15746 Selenicereus undatus HOM05D000730 ORTHO05D000578 7.7e-21 104.8 177 41.8
Pp3c7_24310 Physcomitrium patens HOM05D000730 ORTHO05D000578 1.5e-19 100.5 169 38.5
SMO116G0331 Selaginella moellendorffii HOM05D000730 ORTHO05D000578 3.3e-19 99.4 169 37.3
AagrBONN_evm.TU.Sc2ySwM_344.4217 Anthoceros agrestis HOM05D000730 ORTHO05D000578 4.2e-19 99.0 179 37.4
CDE09G0864 Ceratophyllum demersum HOM05D000730 ORTHO05D000578 4.2e-19 99.0 176 39.8
Lsat_1_v5_gn_3_5660 Lactuca sativa HOM05D000730 ORTHO05D000578 1.2e-16 90.9 118 48.3
Mapoly0125s0045 Marchantia polymorpha HOM05D000730 ORTHO05D000578 4.9e-15 85.5 169 36.7
Lsat_1_v5_gn_5_50861 Lactuca sativa HOM05D000730 ORTHO05D000578 2.4e-14 83.2 92 52.2
Lsat_1_v5_gn_3_52940 Lactuca sativa HOM05D000730 ORTHO05D000578 5.9e-13 78.6 131 42.0
Lsat_1_v5_gn_6_42840 Lactuca sativa HOM05D000730 ORTHO05D000578 2.3e-12 76.6 170 38.8
SHI11372 Sapria himalayana HOM05D000730 ORTHO05D000578 4.7e-10 68.9 111 39.6
Lj9A659G48 Lonicera japonica HOM05D000730 ORTHO05D000578 1.4e-09 67.4 80 50.0
SMO367G1286 Selaginella moellendorffii HOM05D000730 ORTHO05D000578 1.8e-09 67.0 183 31.1
Lalb_Chr01g0007381 Lupinus albus HOM05D000730 ORTHO05D000578 8.9e-09 64.7 88 44.3
EL10Ac2g03229 Beta vulgaris HOM05D000730 ORTHO05D000578 1.5e-08 63.9 110 39.1
Lsat_1_v5_gn_9_93581 Lactuca sativa HOM05D000730 ORTHO05D000578 4.4e-08 62.4 80 46.2
EL10Ac3g06158 Beta vulgaris HOM05D000730 ORTHO05D004688 2.2e-07 60.1 77 46.8
CBR_g23529 Chara braunii HOM05D000730 ORTHO05D000578 4.9e-07 58.9 173 27.7
HPP92_007385 Vanilla planifolia HOM05D000730 ORTHO05D000578 6.4e-07 58.5 108 33.3
Lalb_Chr01g0007391 Lupinus albus HOM05D000730 ORTHO05D000578 3.2e-06 56.2 92 43.5
Potri.001G108400 Populus trichocarpa HOM05D000730 ORTHO05D000578 3.2e-06 56.2 104 32.7
EL10Ac6g13844 Beta vulgaris HOM05D001947 ORTHO05D004688 4.1e-06 55.8 77 45.5
Lsat_1_v5_gn_9_14041 Lactuca sativa HOM05D004809 ORTHO05D006732 4.1e-06 55.8 150 32.7


User provided reference genes

Program Settings