Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G14270 Arabidopsis lyrata HOM05D006070 ORTHO05D009119 7.1e-151 537.3 290 100.0
AT5G04640 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 3.2e-87 325.9 304 67.8
Thhalv10015623m.g Eutrema salsugineum HOM05D006070 ORTHO05D020096 4.7e-54 215.7 315 48.6
AT1G46408 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 1.3e-40 171.0 256 48.4
Sp5g22450 Schrenkiella parvula HOM05D006070 ORTHO05D020096 3.9e-40 169.5 384 38.5
Carub.0002s1330 Capsella rubella HOM05D006070 ORTHO05D009119 5.0e-40 169.1 313 40.6
Carub.0002s1331 Capsella rubella HOM05D006070 ORTHO05D009119 4.0e-29 132.9 155 55.5
A10p31460 Brassica napus HOM05D006070 ORTHO05D020096 3.4e-28 129.8 298 36.2
C09p72150 Brassica napus HOM05D006070 ORTHO05D020096 5.8e-28 129.0 316 33.2
BolC9t59959H Brassica oleracea HOM05D006070 ORTHO05D020096 5.8e-28 129.0 316 33.2
Thhalv10023175m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 4.9e-27 125.9 217 42.9
Carub.0004s0822 Capsella rubella HOM05D006070 ORTHO05D009119 5.4e-26 122.5 175 46.9
BraA10t45192Z Brassica rapa HOM05D006070 ORTHO05D020096 2.7e-25 120.2 255 37.6
BcaC06g32177 Brassica carinata HOM05D006070 ORTHO05D020096 3.9e-24 116.3 278 35.3
AT5G38620 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 9.9e-20 101.7 331 30.8
CARHR208650 Cardamine hirsuta HOM05D006070 ORTHO05D009119 1.1e-18 98.2 215 37.7
Carub.0007s2769 Capsella rubella HOM05D006070 ORTHO05D009119 1.6e-17 94.4 207 38.2
CARHR059500 Cardamine hirsuta HOM05D006070 ORTHO05D009119 3.9e-16 89.7 314 32.5
CARHR058390 Cardamine hirsuta HOM05D006070 ORTHO05D009119 5.1e-16 89.4 319 32.9
Thhalv10029235m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 8.7e-16 88.6 176 37.5
AT5G49420 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 3.3e-15 86.7 322 29.8
Carub.0008s0896 Capsella rubella HOM05D006070 ORTHO05D009119 3.3e-15 86.7 318 29.9
AT5G49490 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 4.3e-15 86.3 150 39.3
Thhalv10029256m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 9.6e-15 85.1 311 28.0
Thhalv10029380m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 1.6e-14 84.3 207 34.3
CARHR293630 Cardamine hirsuta HOM05D006070 ORTHO05D009119 6.2e-14 82.4 102 44.1
A06p04480 Brassica napus HOM05D006070 ORTHO05D009119 8.1e-14 82.0 81 54.3
CARHR116680 Cardamine hirsuta HOM05D006070 ORTHO05D009119 8.1e-14 82.0 293 29.4
A06p38250 Brassica napus HOM05D006070 ORTHO05D009119 1.1e-13 81.6 323 30.3
C06p03100 Brassica napus HOM05D006070 ORTHO05D009119 1.4e-13 81.3 81 53.1
BolC6t35429H Brassica oleracea HOM05D006070 ORTHO05D009119 1.4e-13 81.3 81 53.1
CARHR283580 Cardamine hirsuta HOM05D006070 ORTHO05D009119 1.4e-13 81.3 63 63.5
Thhalv10023871m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 1.4e-13 81.3 68 58.8
BcaB07g33746 Brassica carinata HOM05D006070 ORTHO05D009119 2.4e-13 80.5 86 47.7
BcaB07g33759 Brassica carinata HOM05D006070 ORTHO05D009119 2.4e-13 80.5 86 47.7
Thhalv10023813m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 3.1e-13 80.1 68 58.8
Sp2g19880 Schrenkiella parvula HOM05D006070 ORTHO05D009119 4.0e-13 79.7 195 35.9
BcaB07g33520 Brassica carinata HOM05D006070 ORTHO05D009119 5.3e-13 79.3 86 47.7
BraA06t23652Z Brassica rapa HOM05D006070 ORTHO05D009119 2.0e-12 77.4 80 50.0
BraA06t26740Z Brassica rapa HOM05D006070 ORTHO05D009119 2.0e-12 77.4 322 28.3
Sp6g06330 Schrenkiella parvula HOM05D006070 ORTHO05D009119 2.0e-12 77.4 150 40.0
THA.LOC104819503 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 2.0e-12 77.4 110 43.6
THA.LOC104819512 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 2.0e-12 77.4 110 43.6
A08p03550 Brassica napus HOM05D006070 ORTHO05D009119 3.4e-12 76.6 83 48.2
BcaB04g17295 Brassica carinata HOM05D006070 ORTHO05D009119 5.8e-12 75.9 81 49.4
BcaC07g37029 Brassica carinata HOM05D006070 ORTHO05D009119 5.8e-12 75.9 83 48.2
BcaNung02584 Brassica carinata HOM05D006070 ORTHO05D009119 5.8e-12 75.9 236 33.1
BcaNung06358 Brassica carinata HOM05D006070 ORTHO05D009119 5.8e-12 75.9 184 31.5
C06p04630 Brassica napus HOM05D006070 ORTHO05D009119 5.8e-12 75.9 222 33.3
C07p39720 Brassica napus HOM05D006070 ORTHO05D009119 5.8e-12 75.9 236 33.1
C08p03750 Brassica napus HOM05D006070 ORTHO05D009119 5.8e-12 75.9 83 48.2
C08p03960 Brassica napus HOM05D006070 ORTHO05D009119 5.8e-12 75.9 83 48.2
BolC6t35592H Brassica oleracea HOM05D006070 ORTHO05D009119 5.8e-12 75.9 184 31.5
BolC8t47189H Brassica oleracea HOM05D006070 ORTHO05D009119 5.8e-12 75.9 83 48.2
BcaB04g17059 Brassica carinata HOM05D006070 ORTHO05D009119 9.9e-12 75.1 217 28.6
BraA06t26769Z Brassica rapa HOM05D006070 ORTHO05D009119 9.9e-12 75.1 158 38.6
BcaB04g17318 Brassica carinata HOM05D006070 ORTHO05D009119 1.3e-11 74.7 81 48.1
BolC7t44495H Brassica oleracea HOM05D006070 ORTHO05D009119 2.2e-11 73.9 211 35.1
BcaB04g17320 Brassica carinata HOM05D006070 ORTHO05D009119 2.9e-11 73.6 81 48.1
BraA08t32408Z Brassica rapa HOM05D006070 ORTHO05D009119 2.9e-11 73.6 132 36.4
BraA09t37339Z Brassica rapa HOM05D006070 ORTHO05D009119 2.9e-11 73.6 211 29.4
AL2G15620 Arabidopsis lyrata HOM05D006070 ORTHO05D009119 3.8e-11 73.2 67 53.7
BcaC08g43039 Brassica carinata HOM05D006070 ORTHO05D009119 3.8e-11 73.2 81 48.1
BcaC08g43048 Brassica carinata HOM05D006070 ORTHO05D009119 3.8e-11 73.2 81 48.1
A06p38550 Brassica napus HOM05D006070 ORTHO05D009119 3.8e-11 73.2 209 34.4
C05p34160 Brassica napus HOM05D006070 ORTHO05D041893 3.8e-11 73.2 77 51.9
BolC5t32150H Brassica oleracea HOM05D006070 ORTHO05D041893 3.8e-11 73.2 77 51.9
BcaB04g17293 Brassica carinata HOM05D006070 ORTHO05D009119 4.9e-11 72.8 187 31.0
A08p03790 Brassica napus HOM05D006070 ORTHO05D009119 4.9e-11 72.8 83 45.8
C06p02990 Brassica napus HOM05D006070 ORTHO05D009119 4.9e-11 72.8 215 30.2
BolC6t35422H Brassica oleracea HOM05D006070 ORTHO05D009119 4.9e-11 72.8 215 30.2
BcaC06g30712 Brassica carinata HOM05D006070 ORTHO05D009119 6.4e-11 72.4 180 37.8
BraA08t32389Z Brassica rapa HOM05D006070 ORTHO05D009119 6.4e-11 72.4 83 45.8
Sp6g07320 Schrenkiella parvula HOM05D006070 ORTHO05D009119 6.4e-11 72.4 177 31.1
Carub.0002s0441 Capsella rubella HOM05D006070 ORTHO05D009119 8.4e-11 72.0 68 52.9
Sp1g36460 Schrenkiella parvula HOM05D006070 ORTHO05D009119 8.4e-11 72.0 74 51.4
A09p17040 Brassica napus HOM05D006070 ORTHO05D009119 1.1e-10 71.6 211 28.0
Sp2g03710 Schrenkiella parvula HOM05D006070 ORTHO05D009119 1.1e-10 71.6 68 54.4
Sp2g03770 Schrenkiella parvula HOM05D006070 ORTHO05D009119 1.1e-10 71.6 68 54.4
CARHR221010 Cardamine hirsuta HOM05D006070 ORTHO05D009119 1.4e-10 71.2 160 34.4
BolC4t25721H Brassica oleracea HOM05D006070 ORTHO05D016789 1.9e-10 70.9 184 31.0
AT1G60920 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 3.2e-10 70.1 68 50.0
BcaC02g09349 Brassica carinata HOM05D006070 ORTHO05D016789 3.2e-10 70.1 317 27.4
AL2G15570 Arabidopsis lyrata HOM05D006070 ORTHO05D009119 5.4e-10 69.3 69 50.7
BcaB07g31239 Brassica carinata HOM05D006070 ORTHO05D009119 5.4e-10 69.3 67 52.2
BcaC04g22285 Brassica carinata HOM05D006070 ORTHO05D009119 5.4e-10 69.3 109 37.6
C07p39980 Brassica napus HOM05D006070 ORTHO05D009119 5.4e-10 69.3 196 30.6
C09p21210 Brassica napus HOM05D006070 ORTHO05D009119 5.4e-10 69.3 109 37.6
AT1G60880 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 7.1e-10 68.9 70 51.4
A04p07750 Brassica napus HOM05D006070 ORTHO05D016789 1.2e-09 68.2 76 48.7
BraA04t16467Z Brassica rapa HOM05D006070 ORTHO05D016789 1.2e-09 68.2 76 48.7
BraA09t37345Z Brassica rapa HOM05D006070 ORTHO05D009119 1.2e-09 68.2 109 36.7
C04p41630 Brassica napus HOM05D006070 ORTHO05D016789 1.6e-09 67.8 189 31.2
A09p17140 Brassica napus HOM05D006070 ORTHO05D009119 2.1e-09 67.4 109 36.7
C04p41420 Brassica napus HOM05D006070 ORTHO05D016789 2.1e-09 67.4 321 26.8
BcaC04g22292 Brassica carinata HOM05D006070 ORTHO05D009119 2.7e-09 67.0 206 28.2
C09p21070 Brassica napus HOM05D006070 ORTHO05D009119 2.7e-09 67.0 206 28.2
BolC4t25742H Brassica oleracea HOM05D006070 ORTHO05D016789 2.7e-09 67.0 184 31.5
BolC7t44531H Brassica oleracea HOM05D006070 ORTHO05D009119 2.7e-09 67.0 213 29.1
BolC9t55008H Brassica oleracea HOM05D006070 ORTHO05D009119 2.7e-09 67.0 206 28.2
BraA04t16485Z Brassica rapa HOM05D006070 ORTHO05D016789 4.6e-09 66.2 305 26.2
BolC9t55023H Brassica oleracea HOM05D006070 ORTHO05D009119 1.8e-08 64.3 109 36.7
Carub.0002s0435 Capsella rubella HOM05D006070 ORTHO05D009119 3.9e-08 63.2 69 46.4
Sp2g19510 Schrenkiella parvula HOM05D006070 ORTHO05D009119 8.7e-08 62.0 237 31.6
CARHR285170 Cardamine hirsuta HOM05D006070 ORTHO05D009119 1.5e-07 61.2 112 37.5
CARHR186430 Cardamine hirsuta HOM05D006070 ORTHO05D009119 7.4e-07 58.9 247 28.7
THA.LOC104820177 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 1.6e-06 57.8 171 31.6
THA.LOC104810603 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 2.8e-06 57.0 80 42.5
THA.LOC104810604 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 2.8e-06 57.0 80 42.5
THA.LOC104810605 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 2.8e-06 57.0 80 42.5
THA.LOC109116026 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 2.8e-06 57.0 80 42.5


User provided reference genes

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