Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G13530 Arabidopsis lyrata HOM05D021302 ORTHO05D021386 1.0e-93 346.7 172 100.0
AL6G13520 Arabidopsis lyrata HOM05D021302 ORTHO05D021386 3.0e-64 248.8 177 74.0
AT5G03930 Arabidopsis thaliana HOM05D021302 ORTHO05D021386 1.6e-62 243.0 181 70.2
Carub.0006s0288 Capsella rubella HOM05D021302 ORTHO05D021386 6.6e-56 221.1 170 67.6
AT5G03920 Arabidopsis thaliana HOM05D021302 ORTHO05D021386 2.5e-39 166.0 171 54.4
AL6G13510 Arabidopsis lyrata HOM05D021302 ORTHO05D021386 3.8e-35 152.1 170 51.8
Aa31LG6G5380 Aethionema arabicum HOM05D005503 ORTHO05D007451 3.1e-21 105.9 155 36.8
Thhalv10015413m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 5.5e-18 95.1 153 38.6
CARHR209270 Cardamine hirsuta HOM05D005503 ORTHO05D007451 8.8e-16 87.8 158 31.6
Thhalv10023018m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 5.7e-15 85.1 153 35.3
Thhalv10015674m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.1e-13 80.9 153 34.0
Sp6g38750 Schrenkiella parvula HOM05D005503 ORTHO05D007451 2.4e-13 79.7 154 33.1
AL6G13600 Arabidopsis lyrata HOM05D005503 ORTHO05D007451 3.1e-13 79.3 154 31.8
Carub.0006s0294 Capsella rubella HOM05D005503 ORTHO05D007451 5.3e-13 78.6 157 33.1
C08p39400 Brassica napus HOM05D005503 ORTHO05D007451 2.0e-12 76.6 160 33.8
C08p39580 Brassica napus HOM05D005503 ORTHO05D007451 2.6e-12 76.3 156 34.0
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 2.6e-12 76.3 131 35.1
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 2.6e-12 76.3 131 35.1
AT5G04010 Arabidopsis thaliana HOM05D005503 ORTHO05D007451 4.5e-12 75.5 157 31.8
BcaC07g40964 Brassica carinata HOM05D005503 ORTHO05D007451 4.5e-12 75.5 160 33.1
Thhalv10027472m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 4.5e-12 75.5 163 32.5
THA.LOC104816403 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 4.5e-12 75.5 163 31.9
A09p56430 Brassica napus HOM05D005503 ORTHO05D007451 1.3e-11 73.9 154 31.2
BraA09t41037Z Brassica rapa HOM05D005503 ORTHO05D007451 1.3e-11 73.9 154 31.2
C04p51340 Brassica napus HOM05D005503 ORTHO05D007451 2.9e-11 72.8 154 32.5
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 2.9e-11 72.8 131 34.4
BcaC02g08721 Brassica carinata HOM05D005503 ORTHO05D007451 3.8e-11 72.4 154 31.2
A09p56630 Brassica napus HOM05D005503 ORTHO05D007451 8.5e-11 71.2 172 30.8
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 8.5e-11 71.2 131 33.6
BraA09t41054Z Brassica rapa HOM05D005503 ORTHO05D007451 8.5e-11 71.2 172 30.8
BcaC07g40948 Brassica carinata HOM05D005503 ORTHO05D007451 1.1e-10 70.9 160 32.5
BolC8t51514H Brassica oleracea HOM05D005503 ORTHO05D007451 1.1e-10 70.9 160 32.5
BolC4t26724H Brassica oleracea HOM05D005503 ORTHO05D007451 1.9e-10 70.1 154 31.2
Thhalv10027188m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 3.6e-09 65.9 146 30.8
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 1.1e-07 60.8 127 33.1
MD14G1081300 Malus domestica HOM05D007529 ORTHO05D007451 8.2e-06 54.7 161 26.1


User provided reference genes

Program Settings