Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 2.7e-67 258.5 123 100.0
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 9.5e-65 250.0 123 95.9
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 5.2e-63 244.2 123 93.5
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 1.3e-61 239.6 123 91.1
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 6.4e-61 237.3 123 90.2
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 3.0e-58 228.4 137 81.8
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 1.1e-57 226.5 131 83.2
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 3.4e-54 214.9 131 79.4
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 3.9e-50 201.4 123 74.8
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 2.5e-49 198.7 122 75.4
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 3.3e-49 198.4 122 75.4
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 1.6e-48 196.1 123 74.8
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 2.1e-48 195.7 122 75.4
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 2.1e-48 195.7 122 75.4
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 2.1e-48 195.7 123 74.8
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 2.8e-48 195.3 123 73.2
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 2.8e-48 195.3 122 74.6
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 3.6e-48 194.9 124 75.0
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 6.2e-48 194.1 123 74.8
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 6.2e-48 194.1 122 74.6
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 6.2e-48 194.1 123 74.0
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 8.1e-48 193.7 123 74.0
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 8.1e-48 193.7 124 74.2
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 1.1e-47 193.4 122 74.6
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 1.8e-47 192.6 123 72.4
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 4.0e-47 191.4 122 73.0
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 4.0e-47 191.4 123 72.4
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 5.3e-47 191.0 122 73.0
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 5.3e-47 191.0 123 73.2
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 5.3e-47 191.0 124 74.2
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 6.9e-47 190.7 123 74.0
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 6.9e-47 190.7 122 72.1
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 6.9e-47 190.7 121 73.6
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 9.0e-47 190.3 123 69.9
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 1.5e-46 189.5 122 73.0
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 2.6e-46 188.7 122 70.5
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 2.6e-46 188.7 122 71.3
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 2.6e-46 188.7 122 71.3
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 2.6e-46 188.7 122 69.7
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 3.4e-46 188.3 122 68.9
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 3.4e-46 188.3 122 68.9
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 4.5e-46 188.0 123 71.5
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 5.8e-46 187.6 122 72.1
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 5.8e-46 187.6 121 70.2
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 7.6e-46 187.2 122 72.1
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 9.9e-46 186.8 122 68.9
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 9.9e-46 186.8 122 71.3
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.3e-45 186.4 122 70.5
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 1.7e-45 186.0 122 72.1
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 1.7e-45 186.0 121 71.1
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 1.7e-45 186.0 122 72.1
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 2.2e-45 185.7 122 71.3
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 4.9e-45 184.5 123 71.5
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 4.9e-45 184.5 122 72.1
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 4.9e-45 184.5 121 71.9
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 6.4e-45 184.1 123 71.5
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 1.1e-44 183.3 94 90.4
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 1.1e-44 183.3 123 74.0
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 1.1e-44 183.3 119 73.1
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 1.4e-44 183.0 123 71.5
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.9e-44 182.6 121 69.4
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 1.9e-44 182.6 122 70.5
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 5.4e-44 181.0 123 71.5
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 5.4e-44 181.0 122 70.5
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 5.4e-44 181.0 122 68.0
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 9.3e-44 180.3 123 70.7
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 9.3e-44 180.3 122 70.5
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 9.3e-44 180.3 122 69.7
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 2.1e-43 179.1 122 68.9
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 2.7e-43 178.7 94 87.2
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 2.7e-43 178.7 122 68.0
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 3.5e-43 178.3 121 69.4
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 4.6e-43 177.9 94 89.4
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 4.6e-43 177.9 122 68.0
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 6.0e-43 177.6 126 65.9
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 7.9e-43 177.2 123 67.5
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 1.3e-42 176.4 127 67.7
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 6.7e-42 174.1 122 67.2
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 1.9e-41 172.6 163 55.2
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 2.5e-41 172.2 121 66.1
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 2.5e-41 172.2 118 68.6
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 3.3e-41 171.8 122 68.0
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 7.4e-41 170.6 124 66.1
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 7.4e-41 170.6 124 66.1
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 9.6e-41 170.2 124 66.1
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 9.6e-41 170.2 124 66.1
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.3e-40 169.9 157 56.1
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 8.1e-40 167.2 129 68.2
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 4.5e-38 161.4 124 63.7
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 6.7e-34 147.5 175 47.4
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 7.4e-33 144.1 95 71.6
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 1.6e-32 142.9 93 72.0
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 2.8e-32 142.1 127 55.9
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 5.8e-30 134.4 98 66.3
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 1.3e-29 133.3 93 68.8
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 2.2e-29 132.5 118 54.2
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 1.1e-25 120.2 77 71.4
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 5.5e-20 101.3 61 78.7
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 1.0e-13 80.5 186 30.1


User provided reference genes

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